Viruses: 32283039 Help Entry 32283039          CDS       T40000                                  Symbol gp1, B9N46_gp1 Name (RefSeq) Pepper virus A; RdRp   KO K26628   Betaflexiviridae RNA replication polyprotein Virus 1803898  Pepper virus A Taxonomy SSDB OrthologParalogGFITVOGVOG cluster Motif Pfam:  Vmethyltransf RdRP_2 Peptidase_C23 Viral_helicase1 AAA_22 PhoH AAA_19 Motif Other DBs NCBI-GeneID:  32283039 NCBI-ProteinID:  YP_009357230 RS:  NC_034376 UniProt:  A0A1W5KQI9 LinkDB All DBs Position NC_034376:64..6177 Genome browser AA seq 2037 aa AA seqDB search MALTYRTPMEDIVASFEPAVQATIANTAAVSYKNMESSNFSIANFHLDAVAKQELSRAGL YLSPYSAVVHSPPVCKTLENYMLYSVLPSYIDNKFFFVGIKDHKLHLLKQRHQDISLVTA INRYVTSRDKVRYGNEFVIRSTLPHQGLNRQKGCLEDVTLRDLVPELITRGSKYLFFHDE LHYWKKKDLITFLEVLKPEVMLGTIVYPPELLIGAKSSLNPWCYEYEIKGQLLLFYPDGV HTEGYEQPLHGGYLLKCNTVVLPDGTVYKVDLLCSKFAHHLVSLTRGEMENTKYRSFDKF QAIAFDSLADLTAEKLPYYPISYSVVSKLYRYIKSLKKPDAQSAMAKLSQIVPEPTAFEI KFVQEFSALVMDAKGLRSTICPEVWRSFMKDCYSGVLPSWLSRQLDVVKEVSLDRFVSSM RPLCITVKLEECNAKSVDLIFEWDQLFVEEGVDIVDALGRFNGESLDPAKLWPHVGAPYV GLAPIAERPKKCLLHVPAANLKVALKRVVLKCYAPSAVNDGTDGEVLELILTLLSKSAFL SMRALRASGEEHSDLVRTVSYAVKFVTTRRCAASFFNLGLAWFCKVKRGNMHYLDNNSTG AAVPMVIKQKWSSVIAQIRDRGFDGGSQVSQATTGSVSKEFKTRGESDAPLCNSVGCPTM PGGTVSDARIGQSYVIGVCSHQWEVKRELPGVWGEDGNAFLRYVGATQLNQASMLIRDVE NLPDYALASKCKSYEWPEWLDIWSELSGITARFDRCVIQQCFGHKCGPATHAINHVLRSG ATEIYAFAIKGDVVISLACCGQESDLLINEGHILKLGSVASPESLALKHTGSSTLGLLYK VVKLSVVAAENDEACEDEDRDGHNVPEQTPEPSPQTGEINPNTIPGSRLEIGQCIGASEG PGQIGTNQSATGVSGPSICPDKSLRFKITADVELSAQTSVNCAPTGYSGSLFGALAKGLG LRENTVVQFVNEGLEFLATQQVELEGSILTNLDNARQSVLEVCALVTMYTTCVVLIIDEQ DVSLRVGPRESTGKVWPSCYIRLGGTSSGAVFCLEYPRNQCVLVAMAQALQRDVSELRTV LVRDGYDRINESLHSGLGLELTDIEQLCCIFSINAIIDAQGRRLVLNPQGKTHAYFTLDN EHLTYCEKVKTHAFNQLTDLAVSNAISDSAFAEVATVASILTFDVSTARAKLLADSFHEG STGVLMSELFNSEHNLREHIQSESELDLKMQVYGIFGTFGAGKSRIFKNLCNKAGGKRLF YVSPRQALLKEVKADIDFEPDMKLRLRKGQQNWYLLTFERFVQRARTLCTSDVVVIDEIQ LYPPGYLDLVICLMPAGVRLVVMGDPCQSDYDNEKDRNNFVGIPDCATSLLQKQEYKFNI ESRRFKNANFIGRLPCSISEMQCSINEEYIIREGLDHLVDLDQKYLEVILVSSFDERKVV RSYLGPDCNVQTFGESTGMNYKNGSIVITGVSVKASDRRWVTALSRFSENVAFCNATGLN LDTLMQVYKDRCLNKFLSGRAAVSDLKLYLPGTPIFKTGFYKVGKDEGVREEKLSGDPWL KGMIDLGQTEDLQEEELQAIEEAQESFKIHLPREELEGTRTRWVHRILNKEIREHRIGTL VSDQFTDDHSKQRNAIQLTNAAERFETIYPRHRASDTVTFIMAVKKRLRFSKPAKEMGKL HNARPFGKFLLNQFLDKVPLKPHMDHAKMDLARNNFFDKKTSKSAATIENHSNRSCRDWL ADVGMIFSKSQICTKFDNRFRMAKAAQSIVCFQHAVLCRFAPYMRYIEMKLQEALPERYY IHSGKGLEELNEWVIKGNFSGLCTESDYEAFDSSQDQYIMAFELELMKYLRLPLDLIKDY EYIKTHLGSKLGSFAIMRFSGEASTFLFNTMANMLFTFLRYHIRGDEFICFAGDDMCSSK VLRKKSEHEGFLNKLSLKAKVQHTSTPTFCGWHLCPDGIYKKPQLVFERMCIAKETNNLA NCIDNYAIEVSYAYRLGERITSRMDEEELGAYYGCVRTIIKYKHLLKSDIKHLFEEQ NT seq 6114 nt NT seq  +upstreamnt  +downstreamnt atggcgcttacataccgtactcccatggaggatatcgtcgctagttttgaacctgccgta caggcaactattgcgaacacagctgctgtgtcttacaaaaatatggaatcaagcaacttc tccattgcaaacttccatttggacgcagtggccaagcaagagttgagccgtgctggcttg taccttagtccttattccgccgttgtacattccccccccgtgtgtaaaaccttagaaaat tacatgctttatagtgttcttccctcttacatagataacaagtttttctttgtaggtatt aaggatcataagttacatttactcaagcaaaggcatcaggacatctctctagttaccgcc atcaatcggtatgtgaccagcagagataaggtgaggtatgggaatgaattcgttatacgc agtaccttaccgcatcaaggcttgaatcggcagaagggttgtttggaagacgtgactctg cgagatctggtaccagaattaataaccaggggaagtaagtacctgttcttccacgacgaa ttgcactattggaagaaaaaagatcttataactttccttgaggtgctcaagcccgaagtt atgctcggtacaatagtttaccccccagagctgttaattggtgctaagtcatctttgaac ccgtggtgctatgagtatgagatcaagggccagcttcttcttttctatcctgatggcgtt catactgaggggtatgagcaacccctacatggtggttatttgttgaagtgcaacactgtt gtgctacctgatgggaccgtttacaaggtagatttgttatgtagcaaatttgcccatcat ttggtttcactcaccagaggggaaatggagaatactaagtatcggtcatttgataaattt caagccattgcctttgatagtttggcagatttaactgctgaaaaattgccttattacccc attagctatagcgttgtttctaaattatataggtatatcaaatctctcaagaaaccagat gcgcaatctgcaatggcaaagttgagccaaatcgtaccagaacccactgcatttgaaatc aaattcgtgcaggagttctcggcccttgttatggacgcgaagggcttgaggagcaccata tgtcctgaagtgtggcgcagttttatgaaagattgttatagtggcgttctaccaagctgg ctctccaggcaattagatgtagtgaaggaggtgagtcttgatagatttgtcagcagcatg cgcccactatgcattacggtcaagcttgaagagtgcaacgccaaaagcgtggatctcata tttgagtgggatcaacttttcgtcgaagagggcgtggacatagttgatgctctggggagg tttaatggagagtcattggatccggcgaaattgtggccgcatgtgggtgcaccttatgtg gggctagcccccatcgctgaacgccccaagaaatgtttattacacgtacctgcagctaac ctcaaagttgcattgaagagggttgtgctcaaatgctatgcacccagtgctgtaaacgat ggtacagatggggaggtgctggagctaattctcacgctgcttagtaagagtgcattccta agcatgagagcattgcgtgcatctggggaagaacacagtgatttggtgcgcactgtgtca tatgcagtgaagttcgtgaccacaagaagatgtgctgcaagcttctttaatttgggctta gcttggttctgcaaggttaaaagagggaatatgcattacttggacaataactcgacgggt gcagcggttcccatggtcataaagcaaaaatggagctccgtaattgcacagattagggac cgaggctttgatggtggatcacaggtgtcgcaagcaaccacgggcagtgtgagtaaggag tttaaaaccaggggtgaatctgatgcaccactttgcaactcagtaggatgccctacaatg cctggaggaacagtaagcgatgcgagaattggtcagtcttacgtcatcggtgtgtgctcg catcagtgggaagttaagcgggaattgccgggagtttggggggaagatggaaatgcattt ctgaggtatgtgggcgcaactcaactgaatcaagcttctatgttgatcagggatgttgag aatttgccggactatgcgcttgcaagtaagtgcaagagttatgaatggcccgaatggctt gacatttggagtgagttgtccggcatcaccgcgcgttttgataggtgcgtgatccagcaa tgctttggccacaagtgcggaccagccacacatgccatcaatcatgtgttgcgcagtggt gctacagagatatatgcatttgcaatcaaaggtgatgtggttatttctctggcttgctgc ggccaagagtcggatttgctaattaatgagggtcacatcctaaagcttggttccgtggcg tcacctgagtcgctagcgctcaagcacactggaagcagtactcttgggttgttgtacaaa gtggtgaaattatcagtagttgccgctgaaaatgatgaggcttgcgaagatgaggataga gatggccacaacgtgccggagcaaactccggaacctagtccacagactggtgagattaac cccaacactatccctgggagtaggttggaaataggacagtgtattggtgcgtcagagggg ccaggtcagattggcactaaccagagcgccaccggagtaagtgggccttcaatatgtcca gacaaatccttgagatttaaaataaccgctgatgttgagttgagtgctcaaacgtctgtg aattgtgcacccacaggttatagtggaagtctatttggtgcgcttgctaagggtctgggc ttgagagaaaacacagtagtgcagttcgtgaatgagggtctggaatttctcgcaacacag caggttgagctagaggggtcgatactaaccaatttagataatgcgagacaaagtgttctt gaggtttgcgccctcgtcaccatgtacactacatgtgtagtgttaataattgatgagcaa gacgttagcctaagggtcggaccaagggaaagtaccgggaaagtgtggccatcatgttac ataaggttgggtggcaccagctctggcgcagtgttttgtcttgagtaccccaggaatcaa tgtgtacttgttgcaatggctcaagctttgcaacgggatgtgagtgagttgcgcaccgtg cttgttcgggatggttatgataggattaacgagtcgctgcactctggtttgggtcttgaa ttgactgacattgagcaactttgttgtatattctcaattaacgccattattgacgcacaa gggaggaggctggttttgaatccacaaggtaagacgcacgcgtacttcacgttggataat gagcacctcacctattgcgagaaggttaaaacgcatgcgttcaaccagttgactgactta gcagttagcaacgcaatcagtgattcagctttcgcagaggtggctacagttgcttccata ctaacttttgatgtcagtacagcgcgggcaaagttgctagctgatagtttccacgagggt tccacaggggtgctcatgtcagagctgttcaattctgagcataatttgcgtgagcacata caaagcgagtcggaattagatttaaagatgcaagtgtacgggatttttggcactttcgga gccggtaagtcaagaattttcaaaaatctctgtaacaaggctgggggcaagcggcttttt tatgtgtctccacgacaagcgcttttgaaagaagtgaaggctgacatagattttgaacca gacatgaagttgcggttgcggaaggggcagcagaattggtatctcctcacattcgaaagg tttgtgcagcgagctagaacattgtgcacgagtgatgtggtggtcattgatgagatacag ttatacccaccaggctacttggacttggttatctgcctaatgcctgcaggggtgcgcctg gttgtgatgggtgacccttgtcaaagtgattatgacaatgagaaggaccgcaataacttt gtgggtatcccagattgtgccacatcattgctccagaagcaggagtacaagttcaatatt gaaagccgcagattcaagaatgcgaacttcattgggcgtttaccctgcagcataagtgaa atgcaatgcagcatcaatgaagagtacataattagagaaggcctcgatcatttggtggac cttgatcagaaatatctggaggtaatactggtcagctcatttgatgaacgcaaagttgtg cgtagctacctagggccagattgtaatgtgcaaacttttggtgagagtactggcatgaat tacaagaatggttcgattgtcataaccggggtcagcgtaaaggcgagtgacaggagatgg gtgactgccttgagtcgatttagtgagaatgtggctttctgcaatgcaaccgggctcaat ttggacacgttgatgcaggtttacaaggacaggtgcttgaataaattcctgtctgggcgc gccgctgtcagtgacctgaagttgtacctacccggcactccaattttcaagactggcttc tacaaagtgggcaaagatgagggcgtgagagaagagaaactttcaggggatccatggtta aagggcatgatagacctaggtcagacagaggacttgcaagaggaggagttgcaagctata gaagaggctcaagagtcattcaagatccacttaccaagagaagagttagagggtaccaga accaggtgggtgcatagaatccttaataaggaaattagggaacatcgcatagggaccctg gtgtcggaccaattcacagatgaccacagcaaacagcggaatgccattcagttaaccaat gctgcagagcgctttgaaaccatatacccaaggcatagggcatcagacacagtcaccttc atcatggctgtaaagaagaggctaaggttttctaagccagcgaaggaaatggggaagctt cataacgctaggcctttcggcaagtttctgctcaatcagttcttagacaaagtgcccctc aaacctcacatggaccatgctaaaatggatcttgctcgtaacaatttctttgataagaaa acgagcaaaagcgctgcaactatagagaaccacagcaatagatcatgtagggattggttg gcagatgtggggatgatattctcaaaaagccagatatgtacaaagtttgataacagattc aggatggcaaaggcagcacagagtatagtatgctttcagcatgcagtcctttgtcgtttt gctccatacatgaggtacatagaaatgaaacttcaggaagctttgcctgaaaggtattac atacattccggcaaagggcttgaggagctgaacgagtgggttatcaagggtaacttctcc ggtttatgcactgagtctgattatgaggcctttgattcttcccaagatcagtacattatg gcttttgagttggagctaatgaagtacttgagattgccactagatctaatcaaggattat gagtacattaaaacccatctcgggtcaaaattggggtcattcgcaatcatgaggttctcg ggtgaagcaagcacgttcctcttcaacaccatggctaacatgttattcacctttcttagg taccacattcgtggggatgagttcatctgtttcgcgggtgatgacatgtgttcctccaaa gttttgagaaagaaaagtgagcatgagggcttcttgaacaagctttctcttaaagcgaaa gttcagcacacaagcacaccaacattctgtggttggcatttgtgcccggatgggatctat aaaaaaccgcagttggtatttgagagaatgtgcatcgcaaaggagactaataacttggca aattgcattgataactacgccattgaagtttcctatgcgtacaggcttggtgagagaata acctcgaggatggacgaggaggagctgggtgcttactatgggtgcgtaaggacgatcatt aagtacaagcatctactcaagtctgacataaagcacctgttcgaagagcaatga

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