Viruses: 3260448
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Entry
3260448 CDS
T40000
Symbol
gp46, S-PM2p121
Name
(RefSeq) Synechococcus phage S-PM2; SbcC-like subunit of palindrome specific endonuclease
KO
K27519
Kyanoviridae SbcC-like subunit of palindrome specific endonuclease
Virus
238854
Synechococcus phage S-PM2
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
AAA_23
SMC_N
AAA_29
AAA_21
ABC_tran
AAA_27
BLOC1_2
zf-Di19
FtsK_SpoIIIE
GAS
RsgA_GTPase
YkiC
Motif
Other DBs
NCBI-GeneID:
3260448
NCBI-ProteinID:
YP_195153
RS:
NC_006820
UniProt:
Q5GQL9
LinkDB
All DBs
Position
NC_006820:86556..88286
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AA seq
576 aa
AA seq
DB search
MITFKKIRWKNFLSTGNVFTEIDITKTKTNLIVGDNGAGKSTILDALTFSLFGKPFRKIN
KPMLVNSINEKDCITEIEFSIGKNEFKVIRGIKPSIFEIYCNEKLWNQESTLVDQQKNFE
QNVLKMNYKSFTQIVVLGSSTFVPFMRLPVAQRREIIEDILDIQVFSVMNILLKDKIREN
NEEIKGIDYQLDLLKEKIDLQKNYLLEIDKKQKADIDKKNEKITELLNEELNHHNLINET
NVKIEELNEEIKKYSSSSDKLKKLNTFLIKLSSKMQTCQKEHEFFEKNQVCPTCTQDLSD
QFREDKISSGKSKLDEMTLGYNDLMEAIGEEEKRFCKWDEISSSITENNNKISQCNYAIK
SIRKSIDDVEKEIKELESGGGDKKEAYTKLETLVANKKDLSFQLSESKKDKDMLSVASGL
LKDNGIKTRIIKKYLPIMNKLINHYLQGMDFYVNFTLDENFEETIKSRFRDQFSYASFSE
GEKARIDIALLLTWRSIAKLKNSVDTNLLILDEIFDGSLDQQGGSDLGWILRSFDDNISV
FVISHKEQMNDKYDRTFNVEKIKNYSVVRETISKLD
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgatcacgttcaagaaaattcgatggaagaatttcctatcaacaggcaatgtcttcacg
gaaattgatatcacaaaaacaaaaacaaatctgatcgtaggagataacggagcaggaaaa
tctaccattctagatgctcttacattttctctttttgggaaaccattccgtaagatcaat
aaaccaatgctagtcaatagcatcaacgaaaaagattgtataaccgagattgaattcagc
attggtaagaatgagtttaaagttattcgtggcattaaaccaagtatttttgagatctac
tgcaacgaaaaattatggaatcaagaatctactctcgtagatcaacagaaaaactttgag
cagaacgtgctcaagatgaactataaatcttttacacaaattgtagtcttgggttcatcg
acgttcgttccattcatgcgacttcctgttgctcaacgacgagaaattattgaagacatt
cttgatattcaagttttctctgtaatgaatattctcctgaaggataagataagagagaac
aacgaagagatcaagggaattgattatcaattggatcttcttaaagagaaaattgatctt
caaaaaaattatcttctcgaaatagataaaaagcaaaaggcagacattgataagaaaaat
gagaaaatcacagaacttttaaatgaagaactgaatcatcataatcttattaatgagact
aatgtaaagattgaagaactgaacgaagaaataaaaaagtattcttcctcatcagataaa
ctgaaaaagttaaatacttttcttattaaactgagttctaaaatgcagacctgtcaaaaa
gaacatgagttctttgagaaaaatcaagtctgtccaacgtgtactcaagatctttcagat
caatttcgagaagataaaatctcttctggcaaatcaaaactagatgagatgactctagga
tataatgatctcatggaagcaataggggaagaagaaaagcgtttttgtaaatgggatgag
atctcaagttctattaccgaaaacaataacaaaatttctcaatgcaattatgctataaaa
tctattcgcaaatctattgacgatgtagaaaaagaaatcaaagaactagagtctggtggc
ggggataaaaaagaagcgtatacaaaactagagacgttagttgctaataaaaaggatcta
agtttccagttgtctgaatctaaaaaagataaagacatgttaagtgttgcttctggattg
cttaaggacaatggaattaagactagaattatcaagaagtaccttccgataatgaacaaa
ctaattaatcattatctccagggaatggatttctatgttaattttacattggatgaaaat
tttgaagaaacaatcaaatcaagatttagagatcaattctcttacgcttctttcagcgag
ggagagaaagctcgaattgatattgctttgctgcttacttggcgttctattgctaagctt
aagaatagcgtggatactaacctccttattctagatgagatctttgatggatctcttgat
cagcaaggtggtagtgatcttggatggattcttcgaagcttcgatgataatatctcagtc
tttgtcatttcacataaagaacagatgaacgataagtatgatagaactttcaatgtagag
aaaatcaaaaactattctgttgtccgagagacaatttctaaactggactag
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