Viruses: 32878575
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Entry
32878575 CDS
T40000
Symbol
CCL40_gp1
Name
(RefSeq) Allexivirus sigmamedicagonis; RdRP
KO
K26615
Alphaflexiviridae RNA-directed RNA polymerase
Virus
1985968
Allexivirus sigmamedicagonis
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Vmethyltransf
Viral_helicase1
RdRP_2
2OG-FeII_Oxy_2
2OG-FeII_Oxy
UvrD_C_2
4HB_MCP_1
NB-ARC
Motif
Other DBs
NCBI-GeneID:
32878575
NCBI-ProteinID:
YP_009362668
RS:
NC_034622
UniProt:
A0A1X9PY63
LinkDB
All DBs
Position
NC_034622:119..5092
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AA seq
1657 aa
AA seq
DB search
MATRVRKLLDEVTDPSTKAAYSELCFKHAREAAKQATKLAPYVVSDAEALTLERLGITTS
PFATTSHTHASDKILENDCLSIIGHQLPKDPITFIQLKKGKLHLLNRGPGQDRLVNYCHE
PKDVLRYGITHPHVCPRVDTKYAVLADTLHFMSTKQLLHLFTQNPKLERLFATLVLPIEA
VHRLPSLYPEIYYLEYYDDCFAYMPGGHAGGAYVHSYGTLRWLEVGQIGTHTNRYISTGQ
TDYLTLEKIETKAAHHIMLVQRRRPNARWLLAQRWVFKASTFVRLPPVFYPPEANVQNTY
PHDLIKRAQLYCLGVKAVSLRDIFSKFRQIIETTDLARYSMADLIRLANYLLLTTGMQQV
SDYECLLTSGLIAKLSAKIRIRFNQLLESLRGKSSYAALLTVTDVIPVPFTTKPKVYPAE
GESWFTGKTDEDSAPEIDDGSAPPEESAGGPTLEDLELIADMEKALREAESPPKGKMADE
QDQAECSSKTMTEAAHLQVDAVNGDGLSNTDAESDTTNSVDEQQRDVQFIASAEQAPNIQ
NTTLQVAPPQAQLPSMIANCKCGMEVILKQLPQRYQKAKLHFEYQDQLNGREAVFFARIP
DAVYEYPGGRHQSQGWPDTLDMVLQDCGQNPESFDHCLVQRYERGAAIPFHRDNEPVYPL
DNPILTVNLVGKASFELQCKRGEIKIPLSTAEYFIMPNGCQRTHRHAVRALTHHRVSLTF
RSTKRIAACLFTGEDTHMSDDSHFDRATRKHSPDQPATLNVAETKQPDDTQAEERAATPK
SNSFPPFPRATIEILQIHGFKNLRPQSDGTGPIQPVHWNPNTQKLVASEPSEEAPHCYIY
KLAERLKRKVYRYHVDNKRATSYMSDVKNNLTGLVLPKLDRATLSAWVSLCENSSRDVDV
LVIHGAGGAGKSRALQEMLRSRSTLREEVNIILPTIVLAQDWKTKMTTMDPRRFMTFEKA
CERESKEIAIFDDYGKLPAGYIDAYIAIKPNVEMIILTGDQRQSVHHNANGDAQTAGLSS
NIDHFSRYCDYYLNATHRQPRRLANPIQVHAEREFGGAVMRAALLPDKATILVPSQISRM
TASDLGRKAYTYAGCQGLTLPHVVIALDKDTPGCSKEVLYTAFSRASESITFVNTFNENP
AFLAKLDATPYLKTLLSGVREDEWLGRDEPPTEYEPKEPNIKTHLPVANDETFLDDLVEA
MEDKDTRELWSKFEKTNLMQTENKIVQLFPHQQAKDEALFRLTIDKRIRLASPEENEKAM
ARTLSAGNLLFEAYADFMKVPADPQPFDRDLWEHCKQLAQRTYISKPTSNLQQGATRQDP
DFPANAIALFNKSQWVKKLEKVGFKFKPGQTISAFKQSTVLLTTTYALYLRKKREQHQPD
NVFIMCEKTPNQFNDFVLTRFDFSQPSYTSDYEQYDQSQDGAFLNFELRKARHFGVPEEV
INFYRFIKLNAKTFLGNLAIMRLSGEGPTFDANTECNIAYDALRFQLHDAVNACYAGDDL
VRDHVCPERSSWMYSQHLFSLVAKPKATLKPDFCGWRLTPFGIVKSPYQLKTSLELAIQL
KKLEDMRRSYAIDYQFAYKLQDRLYQIFDEKEMEAHQLVTRVLIKHGATTAHTGDHLPTF
HITSDRLILNPHKIEMHDAAGDRAYLETPVTFDNYIQ
NT seq
4974 nt
NT seq
+upstream
nt +downstream
nt
atggccacccgagtgcgcaaattactggatgaagtcactgacccatccacaaaagctgcc
tattccgaactctgctttaagcacgcacgggaagctgccaaacaggccaccaagttggcg
ccctatgtggtcagcgacgccgaagctttaacgctagaacggttaggcatcaccacctcc
ccttttgccacaaccagccacacccacgcatcagacaaaattcttgagaatgactgccta
tccataataggccaccaactcccaaaagatccaatcacctttattcaactgaagaaagga
aaactacacctactcaaccgaggaccagggcaagacagattggtcaactactgccatgag
cccaaagatgttttacgctacggcattactcacccacacgtatgccctcgagttgacacc
aagtacgctgttttagccgacaccctacacttcatgtccacaaaacagctgctacacctt
ttcacccaaaatccaaaattggagaggctgttcgccacgttagtacttccaattgaagct
gtgcacagactaccatctctatacccagagatatactacttggagtactacgacgactgc
tttgcttacatgcccggaggccatgccggaggggcttacgtgcactcctatggcacactc
agatggttagaggtaggccaaattggcacgcacaccaacaggtacatatccacagggcaa
actgactacctcacccttgaaaagattgaaaccaaagcagcccatcacatcatgctggta
caacggagaagaccaaatgccagatggctcttggcgcaaaggtgggtcttcaaagcgtcc
acattcgtcagactgccgccagtcttttacccacccgaagccaacgttcagaacacttac
ccgcacgatctcattaaaagagcacagctctattgtttaggagttaaagctgtatccttg
agagacatattctcaaaattcaggcaaatcattgaaactactgacctcgctcggtattca
atggccgacctgatccgtctagctaactacctgttgctcaccactggaatgcagcaagta
tctgactatgaatgcctactcaccagcggactgattgccaaactgagcgccaaaatacgt
atcagattcaaccagctcttagaatcactgcgaggcaagtcatcctacgctgcactattg
accgtcacagatgtaattccagtccctttcaccacaaaacccaaagtgtatccagcggaa
ggcgaatcctggttcacagggaaaactgatgaagacagcgcaccagagattgacgatggc
tctgcacctccggaagagtcagctgggggccccactttggaagatttggaactcatcgca
gacatggaaaaagccttgagagaggctgagtcaccacccaaggggaaaatggcagatgaa
caggatcaagctgagtgcagttccaaaaccatgaccgaggctgcccatctgcaggtagat
gctgtaaacggcgatggacttagcaacacagatgcagaatctgacactaccaatagcgtg
gacgaacaacaaagggacgtgcaattcattgcctcagcagagcaagccccgaacatccaa
aataccacattgcaagtggcgccaccccaagcccaactcccatcaatgatagctaactgc
aaatgtggcatggaggtgatccttaagcagttgccacagcggtatcagaaagctaaactc
cacttcgagtatcaagatcagcttaacggccgagaggcggttttctttgcaagaatccca
gacgccgtatacgaatatcccggaggacgtcaccaatcacaagggtggcctgacacctta
gacatggttctgcaggattgcgggcaaaacccagagagttttgaccactgccttgtgcaa
cgttatgaaagaggggctgcaatccctttccaccgggacaacgaaccagtctaccccttg
gataaccccatccttacagtcaacctcgtgggcaaagcctctttcgagttacaatgcaaa
agaggcgaaattaagataccgctatcaactgcagaatactttataatgcccaacggctgc
cagcgcacccaccgccacgctgttcgagccttaactcaccaccgagtgtcgctcacattc
cgctctacaaaaagaatagcagcttgcctgttcaccggggaagacacacacatgagcgat
gactcgcattttgaccgcgccacaaggaaacattcacctgaccagccagcaacactgaac
gtggctgaaacaaaacaaccggatgacactcaggcggaggaacgggcggccacacctaag
agcaacagctttccaccctttccaagagccacaattgaaatattgcaaatacatggcttc
aaaaacctccgaccacaaagtgacggcacgggccccattcaaccagtacactggaaccca
aacactcagaagttggtagctagtgaaccttctgaggaggccccccactgttacatctac
aagctggccgagaggttaaaacggaaagtgtacagataccacgtggacaacaaaagggcc
acatcctacatgtctgacgtcaagaacaacctcactggcctggtgctcccaaaacttgac
cgagcaaccctatctgcttgggtatcgctctgtgaaaattcatctcgagatgtggacgtg
ctggtcatacatggtgctggaggtgctggcaaaagcagagctttgcaagagatgttacga
tcacgctccacactgagggaagaagttaacatcatcctgcccacaatcgtcctagcacaa
gactggaaaaccaaaatgactaccatggacccaagacggttcatgacctttgagaaagcc
tgcgagcgagagagcaaagagatagctatcttcgacgactacggcaagttaccagctggc
tacatagatgcatacatcgctatcaaaccaaatgtggagatgattatcctcaccggcgac
caacgccaatccgtccaccacaacgcaaacggtgatgcccaaactgccggactgtctagc
aatatagaccatttcagcagatactgcgactactacttgaatgcgacccatagacaacca
agaaggctagccaatcccatccaggtccatgcagaaagagaatttggcggcgcggtcatg
agagcagcactattacctgacaaagccaccattttggttccctctcaaatatctaggatg
actgccagcgacctaggacgaaaagcgtacacttacgccggttgccaagggctcacactg
cctcatgtggttatagcattagacaaggacacccctggctgctcaaaggaggttctttac
accgctttctcaagagcgtctgagagcatcacttttgtcaacactttcaatgagaaccca
gctttcctagccaaactggacgccaccccctacctcaaaaccctacttagtggcgtaagg
gaagacgaatggttaggtcgtgatgaaccacccaccgagtatgagcctaaagaacccaac
atcaaaactcacttgccagtagccaacgacgaaacattcctggacgacctagtggaagct
atggaagacaaggatactcgggaattgtggtctaaatttgagaaaacgaatttgatgcaa
actgagaacaaaatagtgcagctgtttccccaccagcaggctaaagatgaggctctattc
agactcactattgacaaacgcattcggctcgctagccctgaagagaatgaaaaagctatg
gctagaaccctcagtgccgggaacctcctatttgaggcttatgcagatttcatgaaggtt
ccggcagaccctcaacctttcgacagagacctctgggaacactgcaaacagctagctcaa
cgcacttatatcagcaaacccacttcgaacttgcaacaaggtgcgaccagacaagaccct
gacttcccggccaacgccatagcccttttcaacaaatcccaatgggttaaaaaacttgag
aaagtgggcttcaaattcaaaccaggccaaacaatatcggccttcaagcaaagcacagtg
ttgctcacaaccacctacgccctatacttacgaaagaagagggagcaacaccaaccggac
aacgtgttcatcatgtgtgagaaaaccccaaaccagtttaatgatttcgtgctaaccagg
tttgacttcagccagccttcttatacctccgattacgagcagtacgaccagtcacaggac
ggtgcattcctcaatttcgaactccgaaaagctcgacactttggcgtcccggaggaggta
atcaatttctaccgattcatcaagctcaatgccaaaaccttcctaggcaatttagccatc
atgcggcttagcggcgaagggcccacctttgacgccaacactgagtgtaacatcgcctac
gacgccctcaggttccaactccatgatgccgtcaatgcctgctacgccggagacgacctt
gtaagagaccatgtttgccctgaaagatcaagctggatgtactcacaacacctgttctca
ttggtggctaagcccaaagcgacccttaaacctgacttctgcggctggcgactcacccct
ttcggcatagtcaaatccccttaccaactgaagacctctttggagttggccattcaactc
aagaagcttgaggatatgcgccgcagctatgctatagactaccagtttgcttacaaacta
caggatagattataccaaatctttgatgagaaagagatggaagctcaccagctggttacc
agagtgctaattaaacatggggccaccacagcgcacaccggcgatcatttgcccacattt
cacataacgtctgacaggttgatcttgaacccacacaaaattgagatgcatgatgcagct
ggtgacagggcctacttggagaccccagtcacctttgacaactacatccaatga
DBGET
integrated database retrieval system
