Viruses: 3294637
Help
Entry
3294637 CDS
T40000
Symbol
gp46, PSSM4_121
Name
(RefSeq) Prochlorococcus phage P-SSM4; SbcC-like subunit of palindrome specific endonuclease
KO
K27519
Kyanoviridae SbcC-like subunit of palindrome specific endonuclease
Virus
268747
Prochlorococcus phage P-SSM4
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
SMC_N
AAA_23
AAA_29
AAA_21
AAA_15
ABC_tran
AAA_27
AAA
FtsK_SpoIIIE
SbcC_Walker_B
ABC_ATPase
nSTAND3
MukB
DUF4659
Motif
Other DBs
NCBI-GeneID:
3294637
NCBI-ProteinID:
YP_214682
RS:
NC_006884
UniProt:
Q58LH7
LinkDB
All DBs
Position
NC_006884:127085..128803
Genome browser
AA seq
572 aa
AA seq
DB search
MIVFETIAWKNFLSTGDQWTDIQLDDAGATLIVGSNGAGKSTMLDALCFALFNKPFRKIS
KSQLVNSINEKGTKVQVTFSIGRDEYRVFRAIKPNIFELYKNNKLVDQDAATKDTQKYLE
QSILKLNFKSFTQVVILGSSTFVPFMQLTAPNRREVIEDLLDIKIFSHMNTILKDRYKVA
YQQSKDCSNLLSIAEERLKSQEKLIKSLREVNSVRRQEKEDKVVQNKALIESIEQDQSQR
KDELSVLDKQLIDTESHQYILSDLKSKTADLKSEMKRVSKEMKFLKSHDTCPTCTQTIST
EFKEGKIESLTTSGVDYAKKLKKEQKAIEDVVSILDEANMLSMKAHELRTEISTFDRDLV
RLDSENLSIEKELSNLVAAPKIEKEEHVLKTLVDDFEDTKIDCGKVAQKIDEYHTVRSLL
QDSGIKSRIIKKYVPIFNQLINKYLHSMDFFVNFTLDEEFNEEIKSRFRDDFCYASFSEG
EKQKIDLALLFTWREVARMKNSAATNLLILDEVFDSSLDADSTNALLSILGTLGNNTNIF
VISHKGDILIEKFHRTLRFEKINDFSKLVDDL
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
gtgattgtatttgaaacgatcgcatggaagaattttctttctactggcgatcaatggact
gacatccaacttgatgatgcaggtgcgacacttattgtcggatctaatggtgcaggtaaa
tctactatgttagatgccctgtgttttgctttatttaataaaccttttagaaagataagt
aagagtcaactggtaaatagtataaatgaaaaaggaactaaggtacaagtcacatttagt
atagggagggatgagtatcgtgtattcagagcaatcaaaccgaatattttcgagctttac
aaaaacaataagttggttgatcaggacgctgcgactaaggatacccagaaatatctcgaa
cagagtattctcaaactcaacttcaagtccttcacacaagtcgtcatcttgggttcatcc
acatttgtccccttcatgcaactcaccgcacctaacaggagagaagttatcgaagatcta
ctcgacatcaagatcttctcgcacatgaatacgatcttaaaagatcgatacaaagtagca
tatcaacaaagtaaagattgtagcaaccttctatctatagcagaagagaggttaaaatca
caggaaaaacttataaaatccttaagagaagtaaacagtgttagaaggcaagagaaagaa
gataaagtagtacaaaataaagccttgattgagagtattgaacaggatcaatcccaaaga
aaagatgaactcagtgtactcgataagcaactgattgatacagaatcacatcaatacata
ttatctgaccttaaatctaagacagcagatttaaaatctgagatgaaaagggtatctaag
gagatgaagtttcttaaatcacatgatacttgccctacatgcacacaaacaataagtaca
gaatttaaagaaggaaagatagagtcactgactaccagtggggttgattatgcaaagaag
ctaaagaaagaacaaaaagctattgaagatgtagtttctatcttagatgaagccaatatg
ttatcaatgaaagctcatgaattacgcactgagatatctacattcgatagagatcttgta
agattagattctgagaatctatcaatagaaaaagaacttagtaatctagttgcagcacct
aagattgagaaagaagaacatgttttaaaaacattggtagatgattttgaagatactaag
attgattgtggtaaggtagcacagaagatagatgaatatcatacagtaagaagtttacta
caagatagtggcatcaagagtcgtataatcaagaaatatgtaccaatctttaatcaactt
atcaataaatatctgcacagtatggatttctttgttaactttactcttgatgaggagttt
aatgaagagatcaagagtcgttttagagatgatttttgttatgcatcattctcagaaggt
gagaaacaaaagattgacttagcacttctctttacttggagagaggtagcacgtatgaag
aactcagcagcaactaatctgttgattcttgatgaagtatttgatagttctcttgatgct
gatagtacaaacgcattgctttctatactaggaacgttaggaaacaatacgaacatcttt
gtcatatcacacaaaggtgacattcttattgaaaaattccataggacattaagatttgaa
aagataaatgacttctctaaattggtggacgatttataa
DBGET
integrated database retrieval system
