Viruses: 33194223
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Entry
33194223 CDS
T40000
Symbol
ORF6, CFB60_gp07
Name
(RefSeq) Common bottlenose dolphin gammaherpesvirus 1 strain Sarasota; single-stranded DNA-binding protein
Virus
2022783
Common bottlenose dolphin gammaherpesvirus 1 strain Sarasota
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Viral_DNA_bp
Motif
Other DBs
NCBI-GeneID:
33194223
NCBI-ProteinID:
YP_009388511
RS:
NC_035117
UniProt:
A0A1Z1NEF6
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Position
NC_035117:32011..35430
Genome browser
AA seq
1139 aa
AA seq
DB search
MSSKAQQAQIPPEDNIASRSQVGPCGYIYLYPADDFPVEEASLLGNLYVGGRVLSLPLLQ
GLTVEKGFNFNVKAAYRKVDATTLSVKVTSYHHEALIFHNVEAFKPIFAGPGLEELCDAA
RGLFGFAPFTAPGGGAKEFSVQDLRGPFLPAQCICAAVVTEGFKERLYYGKLIPLPSQIQ
EVKIGSWTAFKVPLYDQDLFPQHHASMKKFYRDAVSRYLYESLYTNLAMAFRVRNVPALI
AAVENQFMHDQYKLPKVSAFKEYPEYATKHPNASSLMIVDGVATELAMSYGLSFIEAPQE
VPPTLDYENWPILAACGTPKDRLDALTEWNAQQAAHVNVHVMSTNSVLYVTRVQKQTAAQ
NKNENVYNSFYLANGLGHATDATFSETGQPAFGGLPASALDDGAFTLEHLAYAACFSPHL
LARYCYYLQFCQHQRSASNPSYNVSQYVGTAANTDACSVCHGACPASCIQTLFYRLKDRF
PPVNGGHRRDPYVISGVTGFYNELDYLGNFASFKDKDEDSVQVEDAPKYTYWQLTQSLLE
KLEGLGIRESQDEGAGETITNIRTFIQTFKDIDSVVDSEVSKFVGSLMKNNVNFKETVKS
VHHIIQFCCNPYWLPPCSVFLNLYYRCLLTILQDISLPSCMMYETDNPAIGHVPSDWLKM
HYQTLWTNFKGLALDKGVLTGNEYRVVHKDVFCDFFDVDAAGSDVFAPVKLQVRISRALI
VAPKNVKVKSRIVFSGTGGSEALQSSYVKQAGKKDNYIICGPYMKFLNAYHRKLFPGATI
SALFLWHTFSQKRKMPMIGGVTKEDMVELVTFVDAGSRIHEEVNVIDTVPDSFVAYAKQR
LNNAILRACGQVQYYINTIHCLLPKAQATAAYEYPHVLGEQNISSVSHYMSAVQGLVCTT
VQTTLREGVSTVGKLRPLVTLPMVVNKYTGVSGNNQVFHCGNLGYFMGRGVDRNLLHDPS
GFRKQNPTAFMRKRHLFMTPLTGNLLKKSASNFSVPFEMETLRRNIQNLLQDKQGDPALF
KSIILELVQGLGEGCAALTLDDLHYYLDSFDLIAEEILSRIQVMSEACGPWTPQWAEEQL
SAMDADEQHSMETFEFVDLSNIADDAGAPAPMEDFVSPVMGPGNSRKRKINSVLGALDL
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccaaagctcaacaggcccagatcccgccggaagataacatcgcgtccaggtcc
caagttggaccctgtggctacatctacttgtatcccgcggacgatttccccgtcgaggag
gcctctctcttggggaacctttacgttggcggccgcgtgctatctctccctctgctgcag
ggcctcaccgtggagaagggctttaattttaatgttaaggcggcctacaggaaagtcgac
gccaccacgctgtctgttaaagtgacgtcgtaccaccacgaggccctaatctttcacaac
gtggaagcgtttaagcccatctttgcgggcccggggctggaggagctgtgcgacgcggcg
cgcggcctctttgggttcgccccgttcaccgccccgggcggaggtgccaaagaattttcg
gtccaggatctccgcggcccgtttctgccggcccagtgtatctgtgcggccgtcgtcacc
gagggattcaaggagaggctgtattatggcaagctgatacccctgccttcccagattcag
gaggtcaaaattggatcctggacggcctttaaggtgcccctgtacgaccaagacctgttc
ccccaacaccacgcctcgatgaaaaagttctaccgcgacgccgtcagtcgctacctctac
gaatctctctacaccaacctggccatggcgtttcgcgtgcggaacgttccggccctgatc
gcggccgtagaaaaccagtttatgcacgaccagtacaagctgcccaaggtctccgctttc
aaagaataccccgaatatgccacgaagcacccgaacgcctcgtccctgatgatcgtggac
ggggtggccaccgagctcgccatgagctacggcctgtctttcatagaggcaccccaggag
gtcccgccgacgctggactacgaaaactggcccatcctggcggcctgcgggactcccaag
gaccgcctcgacgccttgacggagtggaacgcgcaacaggcggctcacgtgaacgtgcac
gtcatgtccaccaactccgtcctgtacgtgacccgcgtccaaaaacagaccgccgctcaa
aataagaacgagaacgtctacaacagcttttacttggccaacggcctcggccacgccacc
gacgccaccttctcggaaaccgggcagcccgcgtttggcgggcttccagcgtccgccttg
gacgacggcgcgtttaccctcgagcacctggcgtacgccgcctgcttctccccgcatctg
ttggccaggtactgctactatctccagttttgccagcaccagcgcagcgccagcaatccc
tcgtacaacgtgagtcagtacgtgggaaccgccgccaacaccgacgcctgctccgtgtgt
cacggcgcgtgcccggcgtcgtgcatccagaccctgttctaccgcctaaaggacaggttt
cctccagtaaacggagggcatcggcgagacccctacgttatttccggcgtaacgggcttc
tacaatgagctggactacctcgggaactttgccagcttcaaagacaaggacgaagactct
gtccaggtggaggatgcgcccaagtacacgtactggcagctcacccagagtctgctcgaa
aaactcgaggggctgggaatccgggagtctcaagacgagggcgccggggagaccatcacg
aacatccggacgtttattcagaccttcaaagacatcgactctgtggtggacagcgaggtg
tccaagtttgtgggcagcctgatgaagaataacgtgaacttcaaggaaaccgtgaaaagc
gtccaccacataatccagttttgctgcaacccctactggctgccgccctgctcggtgttt
cttaatctgtactacaggtgtctgctgaccatactccaggacatatccctgcccagctgc
atgatgtacgaaaccgacaaccccgcgatcggacacgtgccctccgattggctgaagatg
cactaccagacgctgtggacaaactttaagggtctcgccctggacaagggggtcttgacg
ggaaacgagtaccgggtggttcataaggacgtgttctgcgacttctttgacgtggacgcc
gccggcagcgacgtgtttgccccggttaagttgcaggtgcgcatctcgcgcgccctcatc
gtcgcgcccaagaatgtgaaggtgaagagcaggatcgtgttttcgggaaccggcggaagc
gaggccctgcagagcagctacgtgaagcaggcgggcaagaaggacaactacatcatatgc
ggtccttacatgaagtttctaaacgcctaccaccggaagctattccccggggctacgata
tcggccctgttcctgtggcacacgttttcccaaaaaagaaaaatgccgatgatcgggggc
gtcaccaaagaggacatggtggagctggtcaccttcgtggacgccggaagccggattcac
gaggaggtgaacgtcatcgacacggtccccgacagctttgtggcgtacgccaagcagcgc
ctcaacaacgccatactgcgggcgtgcgggcaggtccaatactacatcaacaccatacac
tgcctgcttccgaaggcccaggccacggccgcgtacgagtacccccacgtgctgggcgag
cagaatatctcctcggtgtcgcactacatgagtgccgtacagggcctcgtctgcaccacc
gtgcagaccactctgcgggagggcgtgtccacggtgggcaaactccgcccgctggtgacc
cttcccatggtggttaacaagtacaccggcgtcagcggaaacaatcaagtgtttcactgc
gggaacctggggtacttcatgggccggggcgtggataggaatctgctccacgaccccagc
gggtttagaaaacaaaacccgaccgcgttcatgcgcaagaggcacctatttatgaccccg
ctgacgggcaaccttttaaagaagtcagcctccaatttctcggtgccgtttgaaatggag
accctgaggagaaacattcaaaacctcctccaagacaagcagggagatcccgccctgttt
aagtctattatcttagaactagtgcagggcctgggcgaggggtgcgcggcgttaacgctc
gacgaccttcactattacctggactcctttgacctcatagccgaggagatcctttctaga
attcaagttatgagtgaggcttgtggcccgtggacccctcagtgggcggaagagcagctg
tcggccatggacgcggacgagcagcacagtatggaaacttttgaatttgtggacctgagt
aacatcgcggacgacgcgggagccccggccccgatggaagactttgtttctccggtcatg
ggcccgggcaactcgcgaaagagaaagattaattcggtcctgggcgccttagacctgtga
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