Viruses: 33350037
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Entry
33350037 CDS
T40000
Symbol
CGU93_gp1
Name
(RefSeq) Vanilla latent virus; RNA-dependent RNA polymerase
KO
K26615
Alphaflexiviridae RNA-directed RNA polymerase
Virus
2016426
Vanilla latent virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Vmethyltransf
Viral_helicase1
RdRP_2
MAJIN
AAA_30
Motif
Other DBs
NCBI-GeneID:
33350037
NCBI-ProteinID:
YP_009389473
RS:
NC_035204
LinkDB
All DBs
Position
NC_035204:82..4353
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AA seq
1423 aa
AA seq
DB search
MYTTLVMATSVRKLLDQVSDPSTKAAYSELCFKHARDAATKASAIAPFAVSDSEALGLER
MGITTSPFATTSHTHAADKIIENDCLSIIGHYLPKNPVTLIQLKRSKLHLLGRGANSDHF
ANYSYEPKDVLRYGTANPHYCPKVTTEYAVLADTLHFMSPHQLVTLFLKNSKLQMLFATL
VLPIEALHKLPSLFPEIYRLEYLKDHFVYMPGGHGGAAYVHSYHTLQWLSTAQIGTHTNN
ILSIGSTDFITLEKIETKAAHHIMVVQRRRSAIPWPVPPIWVFHASDMVKLPHIFYPAEA
NVQNAYPNTLIKRMQAYCFSVKAVSLRDIFAKLRQVLETSDLQKYSMPDLVRLANYLLFT
TGMQQVSDYDSFLTKGWLARLSSRIQMRIRQMLQNVVGQSSYAALLSVLDTIPMPFITKP
RAVPAVGPEWFHEEYTEGKPEHDGPENCSLEDIEMLAELDQTLTPHTQTETKEPQSPNGQ
ITNQNTNSAATSSKRTNSENSSESQRRELFDEEQLIAEMWAEIETVPDLGSSSKIESSII
KTPTENGGEQMPTSDFDSRTTEILRIHGFTALKQQSDGISPIMPVYFNDKTDQLCKSKIQ
TGCPFMSMATDIKRHFYDYTIDNRRGQAYMSDVKNNLTGLVLPKLSRETLQAWVSLAENS
KRTIPLLVIHGAGGAGKSQKLQETLRAIGAATEDVNIILPTVNLLKDWKDKMNQMDTRRF
MTFEKAFEREGNRIVIFDDYGKLPAGLIDAYLSIKPTVSMVILTGDQRQSTYHSANKESQ
SAQLPTNIAHFRKYCDYYINATHRQPKRLANPIRVHAQRLHGGSVKKENLIKNGQTVLVP
AHRTQISLTDLGRPSLTYSGCQGLTLPHITIALDSDTPLCSDEVLYTAFSRASESITFVN
TYSENPDFLAKLDATPYLKTLLSGVREDEEAGSDLKPAEPEVREPQIKTHLPVTNTDTFL
ESKVEKTEDKDTRELWDGSEKTNLAQTQDPVIQMFPHQQAKDEALFKLTIQQRIKTASPE
ENRKELSQTINVGNLLFEAYADFMKVPKEPQPFDKALWINCLQTAQRTYLSKPTANLQQG
ANRQDPDFPDNAIALFNKSQWVKKMEKVGFKFKAGQTISAFKQQTVLITTTMALYLRRQR
ERHQPGNIFIMCEKTPDQFNDFVMNNWNFDRPSYTSDYSQYDQSQNGPFLNFELRKARHF
GVPDEVLEFYQHVKCYAQTFVGNLAIMRLSGEGPTFDANTECNIAYDALRFQLNDQVNAC
YAGDDLVRDQVCPERSCWKYCHEKFNLVAKPLATNKPDFCGYRLTKYGIVKSPIQLYQSL
ELAIRLGKTEEVKRSYAIDYLQAYRLGDKLFEIFDEKEMEAHQLTTRVLTKKGMKAPSEG
DHMPSFHITSDRLIRNPHYAEMQDTQSHRIYTEKPNFVENHFT
NT seq
4272 nt
NT seq
+upstream
nt +downstream
nt
ctgtacactactttggtaatggctacttcagtgagaaaactcttagatcaagtatcagac
ccttccaccaaagcagcttattccgagctgtgcttcaaacatgcccgtgatgcagccacc
aaagcttcagccatagcacctttcgctgtctctgattctgaagcccttggactggaacgt
atgggcatcactacctccccatttgctaccacatcccacacacatgctgcagacaagatt
attgaaaatgactgcctcagcatcatcggccactacttaccgaaaaacccagtcacacta
atccagctcaaaaggagcaagttacatctattgggcagaggagctaattcagatcatttt
gccaactatagctacgaacccaaagacgtactaaggtatggcacagcaaatcctcattat
tgccccaaggttaccactgaatatgctgtgttggccgacacactgcacttcatgagccca
catcaactggtaaccctattccttaaaaattcaaaattacagatgctctttgccacactc
gtactaccaatagaagcattgcacaaactaccaagtctcttcccagaaatataccgctta
gagtatctcaaagatcattttgtatatatgccaggcggacatggcggagccgcatacgtt
cattcttatcacacattgcaatggcttagtaccgcccaaattggaacacacaccaataat
atcctatcaatcggttccacagactttataacattggaaaagatagagacaaaagcagca
caccatatcatggtcgtgcagagaaggagaagtgccattccatggcctgtgccaccaatt
tgggtcttccacgcttcagatatggtcaaactgccacacattttctacccagctgaagcc
aacgtccaaaatgcatacccaaatacacttatcaaacgaatgcaagcgtattgcttctca
gttaaagcagtatcactgcgagacatttttgctaagctgagacaagtcttagaaacctca
gatttgcaaaaatactcaatgccagatttagtgcgacttgctaactacttgttgtttacg
acgggcatgcaacaagtcagtgactacgactcattcctcacaaagggatggttagcccgt
ctgagttcccgaatccaaatgagaataaggcagatgctgcaaaacgtagtgggacaatcc
tcatacgcagcattactaagcgtattagatactatacccatgccattcattaccaagccc
agggcagtacccgcagtaggtccagaatggttccatgaggagtacactgaaggaaaacct
gagcatgacggtccagaaaactgctcacttgaagatatagaaatgctagctgagttggat
cagactttaacaccccacactcaaactgaaacgaaggagccacaaagcccaaacggtcaa
atcacaaaccaaaatacaaactcagctgcaacctcctcaaaaagaacaaattcagagaac
tcctcagaatcgcaaaggagagaattattcgacgaggaacaactaatagctgaaatgtgg
gcagaaattgaaactgtaccagacttaggatccagctccaaaattgaatcaagcataata
aagacacccaccgaaaatggtggtgaacaaatgcccacttcagacttcgattcaaggact
acagaaatactcaggatccatgggttcacagctctcaaacaacaaagtgacggaatctcc
ccaatcatgccagtgtacttcaatgacaaaactgaccaactctgcaaatccaaaatccaa
acgggatgccccttcatgagcatggctacagacattaaaagacatttctatgactacact
attgacaatagaagaggacaagcttacatgtcagacgtcaagaacaaccttactggatta
gttctgcccaaattgtctagagaaacactccaagcgtgggtatctctcgcagaaaattcg
aaacgcaccatacctctccttgtcatacatggtgcgggcggagctggaaagagccaaaaa
cttcaggagacactcagagctatcggagcagcaacagaagatgtcaatataatcctacca
actgtcaatcttctcaaagactggaaagacaaaatgaatcaaatggacacacgaaggttc
atgactttcgagaaggcctttgaacgagaaggaaatcgaattgtcatctttgacgactat
ggcaaattaccagcaggtctcatagacgcctacctcagtatcaagcccacagtcagcatg
gttatcttaacaggagaccaacgccaatcgacataccacagcgctaataaagagtcgcaa
agcgctcaactgcccactaacatagcccacttccgcaaatactgcgattattacatcaac
gcaactcataggcaaccaaaacgattggctaatccaatccgagtccacgctcagagacta
catggaggaagcgtgaagaaagaaaatctgatcaaaaatggacaaactgtcctagtgccc
gcccaccgtacccaaatatcacttactgacttaggccgtccatctctcacatactctgga
tgccagggcctcaccctcccccacattaccattgcactagacagtgatacccctttatgc
tccgacgaagttctttacactgccttctcaagggcctcagagagcattaccttcgtcaat
acctattcagagaatcctgactttttagcaaagttagacgcaaccccatacctcaaaact
ttgctatcaggagttagagaagacgaagaagctggttcagacttgaaaccggcagaaccc
gaagttcgcgaaccacaaatcaaaactcatctcccagtaaccaacactgacactttcttg
gaaagtaaagtggagaagacagaagataaggacactcgagaactttgggatgggtcagag
aaaactaatctcgcccaaacacaagaccctgtaatccaaatgtttccccatcaacaggct
aaagatgaagccctcttcaagctcactattcaacagagaattaaaactgcatcgcctgaa
gaaaatcgtaaggagttgagtcagacaatcaatgttggcaacttgctatttgaagcttac
gcagactttatgaaagtacccaaagaaccccaaccatttgataaagcactttggattaat
tgtctgcaaacagcgcaacgaacttacttgagcaaacctactgccaacctccagcaagga
gctaaccgacaagaccccgattttccagacaatgcaattgccttgttcaacaagtctcag
tgggtcaagaagatggagaaagtgggcttcaaatttaaagcgggccaaaccatttcggcc
ttcaaacaacaaacagttctcataaccacaactatggccttataccttcgcagacaacgt
gaaagacaccaacctggtaacatattcatcatgtgtgagaaaacaccagaccaattcaat
gacttcgtgatgaacaactggaattttgacaggccctcctacacctccgattactcacaa
tatgaccaaagtcaaaacgggcctttcctcaattttgaactcagaaaagctcggcatttc
ggagtgccagatgaggtattagaattttaccaacacgtcaaatgctacgcccaaacattc
gttggtaatttagccatcatgaggctaagtggagaaggcccaacttttgatgccaatact
gagtgcaacattgcatatgacgcactcagatttcaactcaatgaccaggttaatgcatgc
tatgcaggtgatgacctggtcagagatcaggtgtgtccagagaggtcttgctggaaatac
tgccatgagaaattcaatctggtagcaaaacccctcgcaactaacaagccggatttctgc
ggatacagacttacaaagtacggcatagttaaatcgccaatacaactgtaccaaagctta
gagttagccatccggctaggcaaaactgaagaggtgaagaggagctacgcaattgactat
ttacaagcatatcgtctaggagacaaactcttcgaaatttttgacgagaaagaaatggaa
gctcatcaactcaccacgcgagttctcacaaagaaaggaatgaaggctccgtcagaaggg
gatcacatgccctcgtttcacataacatctgaccgcctcattcgcaatccccactatgct
gaaatgcaggacacacagtcacacagaatttatacggaaaaaccaaatttcgtagagaat
cacttcacttaa
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