Viruses: 3416123
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Entry
3416123 CDS
T40000
Symbol
46, RB43ORF055w
Name
(RefSeq) Escherichia phage RB43; SbcC-like subunit of palindrome specific endonuclease
KO
K26043
Straboviridae exonuclease subunit 2 [EC:3.1.11.-]
Virus
2887182
Escherichia phage RB43
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
AAA_23
SMC_N
AAA_29
AAA_15
AAA_21
ABC_tran
ATG17_like
AAA_27
DUF2408
nSTAND3
AAA
AAA_18
V_ATPase_I
RsgA_GTPase
HMMR_C
Motif
Other DBs
NCBI-GeneID:
3416123
NCBI-ProteinID:
YP_239031
RS:
NC_007023
UniProt:
Q56BZ3
K0NVP5
LinkDB
All DBs
Position
NC_007023:35177..36880
AA seq
567 aa
AA seq
DB search
MKLNFKKIKYQNILSVGNTPIELEFDTAKKTLITGKNGGGKSTLIEALTYALFGKSFRDL
KVGQLVNSVNKKKCLVELEIEYGKDSYKIVRGQKPKVFEIWKNGDKLAEDSASGDYQSQL
ESMLNINLVGFKQVIVLGTAGYTPFMELRTPDRRKLVEDLLSLSVISEMDKLNKSYVRGV
NQQLDTLSMQVNHIQQQIATHQRFIDEQRAKANQNNARYKEIYDSHVETAKNIKAQLMQL
QAEIAETVITGADRTEDINKLRDGYTRLSMTVEQFKKLEVMYQKGGECPACKQAIKPTPE
RMEEIANNIKAGTQRLTLIKTKQDELQGIMNELLQQQRALNAMKTKYEALKGTLQNEVAN
AKRAQAIMEQASAEVVIDEEPVKQLQQQETELNDKRQGYVKEKYIRGIVTDMLKDSGVKA
SIVKRYIPYFNKQIAYYLNLLGADYQFTLDDEFNESIKSLGRDDFSYASFSQGERARINL
SILFTWRDVTSKVSGVDLSLLVLDEVFDGPLDKEGSFAIKSLLDSVDGNVIVISHQDLDP
QDFDRHIIMSKVGRFTKPSIKDMAVSC
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
gtgaaactaaacttcaaaaaaattaagtatcagaatattctgtcggtcgggaataccccg
atcgaactcgaattcgatactgcaaagaaaaccctgattacgggtaaaaatggtggtggt
aaatccacactgatcgaagcgttgacgtatgctctttttggtaagtcatttcgtgatcta
aaagtcgggcaactggtaaacagtgtcaacaaaaagaaatgccttgttgaactcgaaatt
gaatatggcaaagactcgtacaaaattgtacgtggacagaagccgaaggtattcgagatc
tggaaaaacggcgataagttagcagaagattcggcatcgggtgattatcaatctcagctt
gaatccatgctcaatattaacctggttggattcaaacaggtaatcgtgttgggtactgct
ggttatactccattcatggaactgagaacaccggatcgccgtaaactggttgaagacctg
ttgtcgctatcggttatcagtgaaatggataagctgaacaaatcatatgttcgtggtgtt
aatcagcagttggataccctgtctatgcaggtgaaccacatccagcagcagatcgctaca
caccagcgcttcattgatgaacagcgagctaaagcgaaccagaacaacgcacgatacaaa
gagatctacgatagtcacgttgaaaccgcgaagaacatcaaagcacagcttatgcagttg
caagcggagatcgcagaaacggtgatcactggtgcagaccgaacggaagatataaacaaa
ctccgtgatggttatacgcgcctctctatgactgtagaacagtttaaaaagctggaagtg
atgtatcagaaaggtggtgagtgtccggcctgtaaacaggcgattaagcccactcctgaa
cgcatggaagagatcgccaacaatatcaaagctggtacacaacgattaacgctgatcaaa
accaaacaggacgagttgcaaggcattatgaacgagttgcttcaacagcaacgcgcactg
aatgctatgaaaacgaaatacgaagccctgaaaggtactttacaaaacgaagtcgccaac
gctaaacgcgcacaagctattatggaacaggcaagcgcggaagtcgttattgacgaagaa
cccgttaagcagttgcagcaacaagaaacagaactgaatgataaacgtcaaggatacgtg
aaagaaaaatatatccgtggtatcgttacggatatgttaaaagattcaggtgtgaaagcc
agtatcgtaaaacgatatattccgtacttcaataaacagattgcgtattatctgaatctg
ttgggtgctgattatcaatttacactggatgatgaattcaacgaatcgatcaaatctctg
ggacgcgatgattttagttacgcatcattcagccagggtgaacgcgcacgaatcaaccta
tcaattctgtttacatggcgcgatgtaacaagtaaagtctccggcgtggatctgtctctg
ctggtacttgatgaagtgtttgatgggccacttgataaagagggttcatttgcgattaaa
tcacttctggattctgtcgatggtaacgttattgtcatcagtcatcaggatcttgatccg
caagatttcgatcgacacatcatcatgtctaaggttggacggttcacaaaaccatcaatc
aaagatatggcggtatcatgttag
DBGET
integrated database retrieval system
