Viruses: 3416405
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Entry
3416405 CDS
T40000
Symbol
p87, PLPVgp1
Name
(RefSeq) Pelargonium line pattern virus; RNA dependent-RNA polymerase
Virus
167019
Pelargonium line pattern virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
RdRP_3
Drc1-Sld2
Motif
Other DBs
NCBI-GeneID:
3416405
NCBI-ProteinID:
YP_238475
RS:
NC_007017
UniProt:
Q56TL0
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Position
NC_007017:7..2304
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AA seq
765 aa
AA seq
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MAHYFGEALQLGLFVAKASCWASKELALLGPNLAWIATRPLRNDANAILKRIGVHGLAKI
PCNFDSDELTIANDCIVKSDRNLEDESIVVEEVEEGEEKKKSKKVTRRRVKTKPTFAAVL
AADAKNYYGCLPSATRANELSVMKYLVSKCQEHKLTITQTREVSAMAFALTFTPDENDKL
IYKYLNSTEVFERRVDYAKARGVDKCWFELLKRPWHARAWRRVVGRIFGLPEQQAFEFVK
XGCLMDTCGVDTKVYRGEHRWVKEFRGAANPKPRRLYKISGVSPEVRWGVHNNSFVNLRR
GLMERVFYVERSGELLPCPSPEAGLFKRLFNKVGRRVIRFCGHHSPIPRASYPGMFQGRK
RTIYENAVRSLVDRPYNIRDSYLKTFVKFEKLDFSKKPDPAPRVIQPRHPRYNVELGRYL
KPFEHFCYKALDKLWGGPTVMKGYTVEEMGGIIKDSWLQFQKPVAIGFDMSRFDQHVSVD
ALKFEHSIYKACFSKDGNLATLLGHQISNRGSAYANDGYLRYRVEGKRMSGDVNTGLGNC
LLACTITKFLMEEIGVRSRLVNNGDDCVLICEAGDCRAVEGSLTVGWRRFGFTCIAEKPV
YELEKIEFCQMSPIQISDSRVKLVRKPQKSISKDAHSTTPLTTIQLAQEWTRAIGEGGLS
LTSGIPVVQEFYQCLIRNGKKATKESKKMAFYGDYYWKWVNQHSGKYEPVTEEARHSFHL
AFGVSPDQQLALEDIYSRKSLLWESSPFTFEVGAIEWIFNQKIPI
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atggcacactattttggggaggcactgcaattgggcctgtttgttgctaaggccagctgc
tgggccagtaaggagttggcgctcctcggtcctaacttggcctggatagctactagacca
cttcgcaacgatgctaatgccatcctaaagcggattggcgtccatgggttggccaaaatc
ccgtgcaacttcgactccgatgagttaacgatcgcaaatgactgcattgtgaagtccgac
aggaacttggaggatgaatcgatcgtggtggaggaggtcgaggagggggaggagaagaag
aagagcaagaaggtgacaaggaggagggtgaaaaccaagcctaccttcgcggccgtcctg
gcggctgacgcgaagaattattacggttgcctcccgagtgccaccagggcaaacgagctc
agcgtcatgaagtacctagtttcgaagtgtcaagagcacaagctgaccataactcagaca
cgagaggtaagtgccatggcttttgcgttgaccttcacgccggatgaaaatgacaaactc
atctacaaatacctcaattcaaccgaggtgtttgaacgacgggtggattatgccaaggcg
cgcggggttgacaagtgctggtttgaattgctcaagaggccttggcatgctcgagcatgg
aggagagtggttgggcggattttcggactgcctgagcagcaggctttcgagttcgtcaaa
tagggatgcctcatggacacttgcggtgtggacacgaaagtgtaccgcggggaacaccgc
tgggttaaggagttccgtggggcggcaaaccccaagccgcgtaggttgtataagattagt
ggggtatcccctgaagttagatggggggtgcacaacaatagttttgtcaacctcagaaga
gggttaatggaaagggttttctacgtcgaaagatcaggggaactcctaccgtgtccgtct
ccggaggctggtttgtttaaacggttgttcaacaaggttgggcggcgggtgattaggttt
tgcggccatcattccccgatccctagggcttcgtaccctgggatgtttcagggcaggaaa
cgcacgatttatgaaaacgcagtccggtcccttgttgaccgaccttacaatattagggat
agctatttaaaaacttttgtcaagtttgaaaaattagactttagcaagaaacctgatccc
gcgcctagggtaatccaacccaggcatccgaggtacaacgtagaactaggaagatatctg
aagccttttgagcatttctgctacaaggcactagacaagttgtggggagggcccaccgtt
atgaaaggatacacagttgaggaaatgggagggattatcaaggacagctggctccaattc
cagaaaccagtagctattggcttcgacatgagtcgattcgatcaacatgtttctgtggat
gccctgaagtttgagcacagcatttacaaggcttgcttctcgaaagatgggaatctggca
actttgctaggtcaccaaatatctaacagaggctctgcttatgctaatgatggctacttg
agatatagagtggaagggaaaaggatgagcggggacgtgaacaccgggctgggcaattgc
ttgttggcgtgcactatcacaaaatttttgatggaagaaattggcgtgaggtctagactg
gtgaacaacggggacgactgcgtgcttatatgtgaggccggagattgccgcgctgtcgag
ggtagcttgacagtggggtggcgacggtttggcttcacctgcatagcggaaaaacccgtt
tacgagctggaaaagatcgaattctgtcaaatgagccctatacagattagtgattcccgc
gtcaagctagtgaggaaaccccagaaaagcatatctaaagatgcacattccaccaccccc
ctcaccaccatacagctagctcaagaatggacccgcgctatcggagaaggcgggctgtct
ctgaccagcggcatcccagtggttcaggaattctaccaatgcctcatccgtaacggaaag
aaagcgacaaaggaatcaaagaaaatggccttctacggggactactattggaagtgggtt
aaccagcatagcggcaagtatgaaccggtgactgaggaagctcggcattcattccacttg
gcgtttggggtcagccctgaccaacagttggccctagaggacatatactctcgcaagtcg
ctactttgggagtcctccccctttacatttgaagttggcgctatcgaatggatattcaat
caaaagattccaatctaa
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