KEGG   Viruses: 3416602
Entry
3416602           CDS       T40000                                 
Symbol
1a, CYBVs1gp1
Name
(RefSeq) Cassia yellow blotch virus; 1a protein
Virus
300879  Cassia yellow blotch virus
SSDB
Motif
Pfam: Vmethyltransf Viral_helicase1 CMV_1a_C AAA_30 AAA_19 AAA_22 NuDC
Other DBs
NCBI-GeneID: 3416602
NCBI-ProteinID: YP_233101
RS: NC_006999
UniProt: Q50L56
LinkDB
Position
NC_006999:73..2940
AA seq 955 aa
MASLIDLNSLISKKGAESRGVLDIVDNQATQQVLSQVEHLRRSKKINIRNKLAPSEVEAF
KARYGGAFDLNLTQEYNAPHSLAGALRIAEHYDCMDSFPPEDRIIDFGGSWWHHYARKDF
RVHCCCPILGVRDAARHEERMCRLRRLLQSSDYEETPDFCLNKARDCNVQADWAICIHGG
YDMGFKDLCHSMRSHGVRILKGTIMFDGAMLFDESGFLPLLKCRWKKEKGFVKFDFENES
TLSYIHSWDKLGSFFTESVYRIGSTTYLLERELIKCNIMTYKIIATDLPCPKETLRHCVW
FENLSQYVAVNVPVDFNLCRWRRVRVAVSTVREVEEISFRCFKENKEWTENMKAVASVLS
AKSSTVIINGQAIMAGERLSIDDYHLVAFALTLNLYMKYENLRSFHEGLKWGGWWNHFLT
RFWWRGDVPTDSRPWLVNLLGQWFPRLRLDTYAESCEFIAKISDVAEFECDSVPSGFLQR
FFHSEADLQRRIQVELDTVKDSRDKKKKEKEKASKEPKSEEPVEEVFEEAPDDFIRDDVK
PATDGGTVCVDKSTVSRELSLKEYSNYCQRLHENSLSNLRRIWLLAGGKGTVISNKSMLE
TYHRVDCLINAHIAGSGWLYPTEQEYTIGYNDDGLGPKQAGETFIVDKSCVISNNASLAK
ASQGLKAPKCSVTLCDGVAGCGKTTAIKNTFSIEKDIIVTANKKSASDVREAIFPEDPEG
EIASKFIRTADSALMHGLPSCQRLLIDEAGLLHFGQVLAVAAICKATEVLAFGDSEQISF
KSRDNTFRFRHQKIIYDRRDVVTVTYRCPQDVVAAVVKMKRRTGKLRESKYSSWISRSKV
EKSLSARPISSLNQIVIEPHKFYQTMTQSAKAALMTRAKDFQLPKSWIEANIKTAHESQG
ISVDHVVHVRDKSTKCDLYKDEEYCLVAMTRHKKTFEYCYNGELAGDLLLHSIRS
NT seq 2868 nt   +upstreamnt  +downstreamnt
atggcttctttaattgatttgaactctctcatatccaaaaagggcgctgagtccagaggc
gtcctagatattgtggacaaccaggccactcaacaagtgttaagtcaggttgaacacctt
aggagatcgaagaaaatcaatatacgtaataagttggcaccgagtgaagtagaggcattc
aaagctcgttatggtggcgcatttgatcttaatttgactcaagaatacaatgcaccccat
agtctggctggggctttgagaattgccgaacactatgattgcatggactcattcccaccc
gaagacaggatcatagattttggtgggtcctggtggcatcattatgccaggaaggatttc
agagttcactgttgctgtcccattttgggggtaagagacgctgcgcgtcatgaagagcgc
atgtgtcggctgagaagactcttgcaaagttccgattacgaggaaacgcccgatttctgc
ttgaataaagctagagattgtaacgtccaggctgactgggcgatatgtattcacggtggt
tatgacatgggtttcaaagacctgtgtcactccatgcgtagtcatggcgttaggatccta
aaaggaactattatgtttgatggggccatgttgtttgatgaatccgggtttctacccctc
cttaaatgccgatggaaaaaggagaagggttttgtaaaatttgattttgagaatgagagc
actttgtcgtatatccattcctgggataaacttggttctttcttcacggagtcggtctac
cgtatcggtagtaccacttatctcctagagagagaactgataaagtgcaacatcatgact
tacaagatcatagccacggatttgccctgtcctaaagagactctcaggcactgtgtgtgg
tttgaaaacctatcacagtacgttgcagtgaacgtccccgttgatttcaatctgtgcaga
tggcgtcgtgtcagagtagccgtttcgacggtgagagaggttgaggagatatcctttcgt
tgtttcaaagaaaacaaagaatggactgagaacatgaaggctgtggcttctgtgctctca
gctaagtcctcaacagtaattatcaatggtcaggccatcatggctggtgaacgcttgagc
attgatgattaccatctcgtagcctttgctctgaccctgaatctgtacatgaaatatgaa
aacttgagatcttttcatgagggtcttaagtggggaggatggtggaaccattttttgacc
agattttggtggcgaggagacgtcccaactgattctagaccttggctggtgaatcttctt
ggtcaatggtttccacgtttaaggcttgatacctatgctgagtcctgtgaattcatagcg
aaaatctctgatgtagccgagtttgaatgtgattctgttccatccggctttctccagaga
tttttccactcagaggcggaccttcaacgccgtatccaggttgaacttgacactgtcaaa
gattcccgggataaaaagaagaaggaaaaggagaaggcctccaaagagccaaagtccgaa
gagcccgtggaggaagtctttgaagaggctccggacgatttcatcagagatgatgtaaaa
cccgctactgatggtgggacggtgtgtgttgataaatctaccgtatcgagagagttgagt
ttgaaagagtactccaattattgccaacgtctccatgaaaactcactctcaaatcttcgt
cgaatctggcttttggccggaggtaagggcacagtcatctctaataagtccatgttggag
acgtatcatagagttgactgtttgataaatgctcatattgccggttcgggttggctgtac
ccaactgagcaggagtataccatcggttataatgacgatggtttgggacctaaacaggca
ggggaaacctttattgttgacaaatcctgtgtcatatcaaacaatgccagtttagccaag
gcaagccaaggcttgaaagctcccaaatgttctgtgaccctttgcgacggagtggctgga
tgtggtaagaccactgctataaagaacacgttcagcattgaaaaggatattattgttaca
gcaaacaaaaaatcagcttcggacgttcgagaggcaatcttccctgaagatcctgaggga
gagatagcctcgaagtttattagaacggctgattccgctctcatgcacggacttccgtca
tgtcagcggttgttgatcgatgaagcgggactacttcatttcggtcaagtcctggcagtg
gcagctatctgtaaggcaacggaagttttggctttcggtgattctgaacagattagcttt
aaatcccgtgacaacacattccgtttccgtcatcaaaagataatatatgacaggagggat
gtggttaccgtgacgtatcgctgtcctcaggatgtcgtcgccgccgttgtgaaaatgaaa
cggcgaacaggtaagttgcgtgagtccaaatattcctcttggatttccaggtctaaagtt
gagaaaagtctttcggcaagaccgatctctagcttgaatcaaattgtcattgaacctcac
aagttctaccagacaatgactcagtcggcgaaagccgctctgatgacgagggccaaggat
ttccaattaccaaaaagttggattgaagcgaacattaagactgctcatgagtctcaaggc
atctctgttgatcatgtcgtacatgttcgtgataagtccactaagtgtgatctttataaa
gatgaggaatactgccttgttgctatgacgaggcataagaaaactttcgaatattgttat
aatggtgagttagctggtgacttactattacacagtattcgttcatag

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