Viruses: 35381629 Help Entry 35381629          CDS       T40000                                  Symbol C1175_gp1 Name (RefSeq) Babaco mosaic virus; RdRp   KO K26615   Alphaflexiviridae RNA-directed RNA polymerase Virus 2060511  Babaco mosaic virus Taxonomy SSDB OrthologParalogGFITVogVog cluster Motif Pfam:  Vmethyltransf Viral_helicase1 RdRP_2 2OG-FeII_Oxy_2 AAA_22 AAA_16 Motif Other DBs NCBI-GeneID:  35381629 NCBI-ProteinID:  YP_009448187 RS:  NC_036587 LinkDB All DBs Position NC_036587:109..4728 Genome browser AA seq 1539 aa AA seqDB search MANFRAVMDQLNDPSLRAVVQEEAYREIRKTIEVTKTYNPYAQSSLAADSLEKLGIETNP LAVRAHTHAAAKSIELDMYKIASHYLPKENPVTFLFMKRAKLQYFRRGPQQNDVFLNAHV EPKDVVRYDPDDLFDADTTPKIQTSVAFMGDALHYFPLSVINKIFTASPKLKTLYATLVL PAEAAHRMHSLHPSIYELQFHEENFLYKPGGHAGAAYCHTYKQLEWLQVGRFRWETASGE ERNVTSQILETKGANHLMVFQRGLYNTPTLRCFGVETKYVTMPPIFLPAKFNARLPIRKT VAQQLFLYVKSVKSVTERDIWAKIRQLIKTADLQEYSSKELTLLVNYFFLISKLKSETCF DSILSGGMIKRVFKPLISWINEKKGFIFGKDQFIQLMEALEWVEIDLTYKTKTFDEPNDK SSFNPMGYLPLKDEEGLPGLQESSSDQPQATEEDQVAYDKYLKALSRLQASDESEERESG PPPSNSESEASSSGGNQAEETNSCPPNSTEKSRGLDAILCPCGLSIPLGKAKFPEIPVLE HPERLKGRDAFFFSKDNKPYSYTGGSHHSRGWPSWLDSILAAVEVQETMPNFNQCLVQKF SARSSIPFHRDDEKCYPKGHQVLTVNLKGTCTFKICCDRGVGTANLEEGTYHLSPPGFQE NHRHAVEGCSAGRVSLTFRSTAIQEQHSEGLVAAPLDSLPWKAWIPKLQELGFQGRQLQY DCNGALISPIEQIQSMEKTRPKGVPASLLTCLEKIARAPTHFSPSPIRAKAYSSDVKNAR IGAMLKQQGKDWGHRFDALVEAGKRSLHISVIHGAGGSGKSRAIQNYIKEHTKEPVQVIL PTNELRIDWMRKVPTLKETMCKTFEKALLAPPTPVVIFDDYGKLPAGYIEAFCFFFSTVE LVILTGDSKQSTHHESNENAMTNLIEPFTSEASKLCRYYVNATHRNKKDLANKLGVYSEV SGFTEITHSSSPIPGLHILVPSLYKKQAFSEMGHKASTYAGCQGITAPKVQILLSEETTL CSKEVLYTALSRAVHSIHFINTSPNNQSFWKKLESTPYLKAFLSTLREETAQESKPAQGD PTAVDPPKTHIPVDSALPIYENILDSMPEKHEREIFSKSHGHSNCVQTEDSFVQMFSHRQ AKDETLLWATIEARLVVSNPKSNWQEYLEKKPIGDVLFESYKKAMKLPAERIAFEPQLWE SCIHEVQGTYLKKSEDMIKNGQARQSPDYDPNLISLFLKSQWVKKMEKLGALKIKPGQTI ASFQQATVMLFGTMARYMRRMREVFMPKNILINCETTPESMSSWAAGEGGCWSFKGPSLA NDFTAFDQSQDGAMLQFEILKAKHHSIPEDILDAYISIKTNSKIFLGTLAIMRLTGEGPT FDANTECNIAFTHTKFQIPDGTAQIYAGDDSAIDALPVVRKSFKQIENKLTLKSKPLVAL QQKGDWAEFCGYRITPAGFIKDPKKLHASLMLEVKKKNIKNVRRSYELDLALAYQHRDRL HELLSEEELRFHYETVRTLVKSGGGEVLKTFLPKDESLY NT seq 4620 nt NT seq  +upstreamnt  +downstreamnt atggctaacttcagagctgttatggaccaattaaatgacccctcacttagagcagtagtt caagaggaggcctacagagaaattaggaaaaccatagaagtaactaaaacatacaaccca tatgcacagtcttcgttagcagctgattcattagaaaaattaggaatagaaactaacccg ctcgctgtaagagctcacactcacgcagcagccaaatcaatagaattagacatgtacaaa atagcttcccattatctcccgaaggagaatccggtaacgttcctcttcatgaaaagggct aaacttcaatatttcaggagaggaccccaacagaacgacgtattcttaaatgcccacgtt gagcccaaagatgtggtaagatacgacccggacgatctattcgacgcagacacaacaccc aaaatccaaacgtcagtagctttcatgggtgatgctcttcattacttccctctaagcgtg atcaacaaaatcttcacagcttccccaaaactcaaaactttgtacgccacgttggtttta ccagctgaggccgctcacaggatgcactcattacatccaagcatatatgagctccagttc cacgaagagaattttttgtacaaaccaggaggacacgcgggtgctgcatactgccacaca tacaagcagcttgagtggctccaagtgggaagatttcgatgggaaaccgcctcaggcgag gaaaggaatgtcacttctcaaatactggaaactaaaggagcaaaccacctcatggtcttc cagagaggattgtacaacacaccgaccctgaggtgcttcggcgtcgaaacaaaatatgtg accatgcctcccattttcctaccagctaaattcaacgctcgactgcccataagaaaaact gtcgcccaacaactctttctctacgtaaaatctgtcaagtctgtgaccgaaagagatata tgggcaaaaatcaggcaactcatcaaaacggctgacttacaggaatactcctcaaaggaa ctgactttgctggtaaactatttctttctaatctcaaaactgaagtcagaaacatgcttc gacagcatcttatcggggggaatgatcaagagagtgttcaaacctctcatatcctggatc aatgagaagaaaggtttcatatttggaaaagatcagttcattcagctcatggaagccttg gagtgggtagaaatcgaccttacttataagacaaaaactttcgatgaacccaacgacaaa tcaagcttcaacccgatgggatacctgccgttgaaagacgaggaaggcctacccgggcta caagagagcagctcagatcaacctcaggctaccgaggaggatcaagtggcctacgacaaa tacctcaaggcactaagcaggctacaagcgagtgacgagtcagaggaaagagaatcaggc ccccccccaagcaatagcgagagtgaggcatccagttcaggaggaaaccaagctgaagaa actaacagctgcccaccaaactcaacagaaaagagcagaggtctggatgcaatactgtgc ccatgtggactctcaatacccttaggaaaggcaaagtttcctgaaattccagttttggaa catcccgagagactcaagggaagagatgccttcttcttctcaaaggacaacaagccttac tcctacacaggagggagccatcattcaagaggctggccatcttggctagactcaattctg gcagcagtggaagtccaggaaacgatgccaaatttcaaccaatgcttagtccaaaagttt tccgccagaagctcaatcccatttcacagggatgatgagaagtgctatcccaaggggcac caagtcctcactgtaaacttgaaaggaacatgcaccttcaaaatatgctgtgacagaggg gtaggaacagccaacctggaggaaggcacttaccacttatccccaccaggctttcaggag aaccacaggcatgcagtggaagggtgctcagctggcagagtttcattgacattcagatca actgcgatacaagaacaacactctgaaggcctagtcgcagccccactcgactcacttccc tggaaagcatggataccaaagctccaagaattaggattccagggcagacaactgcaatat gattgcaacggtgcactaataagccccatcgaacagatccaatcgatggaaaagacaagg ccaaagggagttccggctagccttctcacttgcttggaaaagattgctagggcaccaacc cacttctccccaagtccaataagagctaaagcttattcctcagatgtgaagaatgcgagg attggagctatgctgaaacagcaaggaaaggattgggggcacagatttgacgcgctagtc gaagctggaaagagatcactccatatctcggtaattcacggagcgggtgggtcaggaaag tcccgcgcaatccaaaactacattaaggagcacacaaaagagccagtccaagtaatcctg cccaccaatgagctaagaatcgactggatgagaaaagtcccgaccttgaaggagacgatg tgcaaaacattcgagaaagcactgctggctccgcccacaccagtagtcatatttgatgac tacgggaagctaccagcaggatacatagaggccttttgcttcttcttctccactgtggag ttggtcatactaactggagactcaaaacaaagcacacatcatgagtccaatgagaacgca atgaccaacctgatcgaacccttcacatcggaagctagcaaactgtgcagatactatgtg aacgccacccacagaaacaaaaaagatttagccaacaaattgggcgtgtactcagaggtt tcaggcttcacagaaattacgcacagctccagtccaattcccgggttacacatcctagtg ccctctctgtacaaaaaacaggctttctcagaaatgggacacaaagcctccacctatgca gggtgccaaggaatcacagcacccaaagtccaaatcctgctgtctgaggagacaactttg tgctctaaagaagtgttgtacacagcactgtccagggcagtgcactcaattcacttcatc aacacttctcccaacaaccaatcgttctggaaaaagctggagagcaccccttatctgaaa gcctttctctccacattgagagaggaaacagcccaagaatccaaaccagcccaaggtgat ccgactgcagttgatccaccaaagacacacattccagttgactcagctctgccaatatac gaaaatatcttggattcgatgccagaaaaacatgaaagagagatattttcgaagagtcat gggcacagcaactgcgtgcaaacagaggactcatttgtgcagatgttctcacatcggcaa gcaaaagatgaaaccttactttgggccacaatagaagccagacttgtggtctcaaacccc aagtcgaattggcaagagtatctagagaagaagccaataggtgatgtactcttcgagtcc tacaagaaggctatgaagttgccagctgaaagaattgcttttgagcctcaattatgggaa tcgtgcattcatgaagtccaaggcacgtatctgaagaaaagtgaggacatgatcaaaaat ggtcaagctagacaatctcccgattacgaccccaatctcatatcgctcttcttgaagtca caatgggtgaagaaaatggaaaaattgggagcgctgaaaataaagccaggtcagaccata gcttcttttcaacaagccacggtcatgctcttcggaaccatggctaggtatatgagaagg atgagggaggtcttcatgccaaaaaatatactgattaactgcgagacgaccccagaaagc atgtcatcatgggctgctggagaaggagggtgctggagcttcaaaggtccctcactagcc aatgacttcactgcgtttgatcaatcccaagatggagcaatgctgcaatttgagatattg aaggccaaacatcactcaatacctgaggatatcctggatgcctacatctcaatcaaaacc aattcaaaaatcttcttggggactctagccataatgcgtctcactggagagggtccaaca tttgacgcaaacacggagtgcaacatagccttcacccacacaaaattccaaataccagat gggacggctcaaatatatgcgggagatgactcggcaattgatgcactgcccgtggtgaga aaaagcttcaagcaaattgagaacaagctcaccctaaagtcaaaacctctggtggccctg caacagaaaggagactgggctgaattctgtggttacaggataactccagcaggtttcatc aaagatccaaagaaattgcacgcatcactgatgttagaagttaaaaagaaaaacattaaa aatgtcagaagatcttatgagttggatctagctcttgcgtaccaacatagagaccgactc catgaactgctgtctgaggaggagctgcgctttcattacgaaacggttcgaacgctggtt aagtcaggaggtggggaggttttgaaaacattccttcccaaagatgaatcactttattga

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