Viruses: 3678174
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Entry
3678174 CDS
T40000
Symbol
ATVp06
Name
(RefSeq) Ranavirus ambystoma1; DNA dependent RNA polymerase subunit a
KO
K26368
Iridoviridae putative DNA-directed RNA polymerase [EC:
2.7.7.6
]
Virus
265294
Ranavirus ambystoma1
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
RNA_pol_Rpb1_2
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
RNA_pol_Rpb1_3
Motif
Other DBs
NCBI-GeneID:
3678174
NCBI-ProteinID:
YP_003777
RS:
NC_005832
UniProt:
A0A0U2S082
Q6YHB9
LinkDB
All DBs
Position
NC_005832:4495..8379
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AA seq
1294 aa
AA seq
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MEMFASKSLQVEGLLFGVCSPEEILATSVVEVTKSCLKAETGSVYDPRMGSAGADDENAL
CPTCENTGRECPGHFGHIELAKPVVLFYKETVAWLKRCCHVCGAVGNEPMPFFFAPYSAC
DACGAQRPLVRLVDAHDPCAIRVTVRRKDGEPETMPPELILATLDRVRDSDVDRVLGRGK
GSHVRFHPRRLVMTRMPVLPPCCRPNARQWPDGAMQDDNLSVFVSQIVKVNQRIKALEHD
DPAVEGLVAQLRLKTLCFVDNTKGKVMHATNRKPMVGIKERIGKKGGLLRQNIMGKRRNQ
TGRSVVGPDGTLEVDEVGVPEAIADNLTVPVMVTPFNVSYLEAMMREGRVSSVETRDGTV
HRPSEWRPSHGDHMETADGSPLGRVTRPSYDARDPSVVLRSWKTGETVTRPPPFSWPKLE
PGMTVTRCLVDGDPVALNRQPTLHRNSMLGMRVKRLPGKTIRLNLSVTSGFNMDFDGDEG
NLYLPQGPQARSETMLLMNPKSVIMSARGPHAEVSLVQDGVLGCHLMSLNSAIPCPPEEL
AACLMEVRGCEGWDVRDVEKGATPRDILSSVLPSTLTVDCGGGCRIESGKIVSGHLTKSA
VKKIVRVVCLENGGDAAGKLVDKLQFLTNAWLSHRPFSVGYSDCLTERPEETVRMVADAV
CSKILEAEAADDEDGVSVALCGARDRGQAVTCAALTPDNRMAVMSRAQSKGDMFNLTQIA
GLLGQQYVGGSRPGKEIDGGRRSLPHYPRVWDSEHTTLKYESRGFVRSSFLKGLNPREVF
FHAKSGREGMISTSQMTGVTGYAERKMVKLNEDLVSAYDGTVRDAMGNVVQFVYGGHGMD
PQRCWSDGCPVNFKTLAEEYSSQECFSQISGLRSPAVTSVEEASLLVPVGLCPGAPDPVR
ESLVLKHASVILKGAEEHPCEDHFAWRERVARSYAAAVLCPGEAVGVLCAQSIGAKQTQQ
TLDTFHKAGGWLDDAGSVPFGELLGLSQKPMRRQCVVPLKVDPSTPGDEVRDLVGCSFVR
RDLLDLLAVRPSTATVGKTASLELDPVKCFKLRISPADVAYAVAEKFPHPHFDVSVSSFG
VTLSWSANYPVNNLFTGLFSVQVGGTPGVESYRLLRGRDGGWVAVTKGTNLGAFLCHPLA
DWERVRTDDVWDVYETLGLAAAKKRLYELMFSCVGDNLYPAHIKLLTDRMMRRGRPTPID
RYTMRTCEVGPLSRAAFEESLDILTGAGCTAETEHCAGAGARVAAGLPVRAGTGYMGLLC
GKGFFDEPMVKVPEADGREYVDYSYSDDESFEWC
NT seq
3885 nt
NT seq
+upstream
nt +downstream
nt
atggaaatgtttgcatctaaatctcttcaggtggaagggctcctctttggcgtttgctcg
cccgaggagatcctggccacctcggtcgtggaagtcaccaagtcctgcctcaaggcagag
acggggtccgtttacgaccccaggatgggatcggcgggggccgacgacgagaacgcactg
tgcccaacgtgcgaaaacaccggacgtgagtgcccgggacactttgggcacatagagctg
gcgaagccggtggtgctcttttacaaggagactgtcgcttggctcaagaggtgctgtcac
gtctgcggggcggttggaaacgaacccatgcccttctttttcgccccgtactctgcgtgc
gacgcgtgtggggcccagaggccgctcgtgaggctggtagacgctcacgatccctgcgcc
atcagggtgactgttaggagaaaggacggcgagcccgagacgatgcctcccgagctcatc
ctggccaccttggacagggtgagggactctgacgtggacagggtcctgggcaggggaaag
ggatctcacgtcaggttccaccccaggaggctggtcatgaccaggatgccggtcctgcct
ccctgctgcagacccaacgccaggcagtggccagacggcgccatgcaggacgacaacctc
agcgtctttgtgtctcagatagtcaaggtaaaccagaggataaaggccctggagcacgac
gaccccgccgtcgagggtctggtggcccagctcaggctcaagaccctgtgctttgtggac
aacaccaagggcaaggtcatgcacgccaccaaccgcaagcccatggtgggcatcaaggag
aggataggaaagaagggagggctcctcaggcagaacatcatgggcaagaggaggaaccag
actggcaggtcggtggtgggtccagacggcaccctggaggtggacgaggtgggggtgccc
gaagccatagccgacaacctgactgtgcccgtcatggtcacccccttcaacgtctcttat
ttggaggcgatgatgagggagggcagggtctcttcggtggagacgagggacgggacggtg
cacaggccctccgagtggaggccctctcacggggaccacatggagacggcggacggatct
cccctgggcagggtgaccagaccctcgtacgacgcccgggacccgtcggtggttctgagg
agctggaagacgggggagacggtgaccaggccgcctccgttttcgtggcccaaactggag
cccggcatgaccgtgacgaggtgtctggtggacggggatcccgtggcccttaacaggcaa
cccaccctgcacagaaactctatgctgggcatgagggtcaagaggctccccggcaagaca
atcaggctgaacctgtctgtcacgagcggctttaacatggatttcgacggggacgagggc
aacctctacctcccgcagggtccccaggccaggtccgagacgatgcttctcatgaaccca
aagagcgtcatcatgagcgccaggggtcctcacgcagaagtgtccctggtgcaggacggc
gtgctgggctgccacctcatgagcctaaactctgccatcccctgccctcccgaggagctc
gcggcctgcctcatggaggttcgcggctgcgagggttgggacgtgagggatgtcgagaag
ggagcgacgcctagggacattctgtcctctgtcctcccgtccaccctgactgtggactgt
ggaggagggtgcaggatagagtctggaaagattgtctctggccacctcactaaatctgcg
gtgaaaaagattgtgagggtagtgtgcctcgagaacggaggggacgcggcggggaagctg
gtggataagctccagttcctaaccaacgcctggctgtctcacagacccttttcggtgggg
tactctgactgcttgacagagaggcccgaggagacggtgaggatggtggccgacgcggtg
tgctccaagatcctggaggcggaggcggcggatgacgaggacggggtgtctgtggccctg
tgcggggccagggacagggggcaggcggtgacgtgcgccgcactcacacccgacaacagg
atggccgtcatgtccagggcccagtccaagggggacatgtttaacctgacgcagatagcg
gggctcctgggccagcagtacgtgggagggtcgaggccgggtaaggagatagacgggggc
aggaggagcctcccccactaccccagggtgtgggactcggaacataccaccctcaagtac
gagtcgaggggattcgtgagatcttcgttcctcaagggcctcaaccccagggaggtgttt
tttcacgcaaagtccggcagggagggtatgataagcacatctcagatgactggggtcacc
ggctacgccgaacgcaagatggttaagctcaacgaggacctggtctctgcctacgacggc
acagtgagggacgccatggggaacgtggtgcagtttgtttacggcgggcacggcatggac
cctcagaggtgctggtcggacggatgtcccgtaaactttaagaccttggctgaagagtac
tcctcgcaagagtgcttctctcagatctcaggtctcaggtccccggcggtgaccagcgta
gaggaggcttccctcctggtgcccgttggactgtgccccggcgctcccgatccggtgaga
gagtccctcgtccttaagcacgcctccgttatcctgaagggagcggaggaacacccgtgc
gaggaccactttgcctggagggagagggtggcaaggtcctacgcggcggcggtcctgtgt
ccgggagaggctgtgggtgtcctgtgcgcccagtccataggagccaagcagacccagcag
accctagacaccttccacaaggcgggagggtggctggacgacgcggggtccgtgcccttc
ggggagctcctgggcctcagtcagaaacccatgaggaggcagtgcgtggtgccgctgaag
gtggacccctccactcccggggatgaggtgagggacctggtggggtgctcgttcgtcagg
agggacctcctggacctgctggccgtcagacccagcacggccacggtgggaaagactgcg
agcctcgagctggatcccgtcaagtgcttcaagctgaggataagtcccgcggacgtggcg
tacgcggtggccgaaaagtttccccatcctcactttgacgtgtccgtctcctcctttgga
gtgacgctgtcctggtccgcaaactaccccgtgaacaacctctttacaggtctcttttcg
gtgcaggtcggcggcactcccggtgtagagtcctacaggctcctcaggggcagggacgga
gggtgggtggcggtgacaaaggggaccaacctgggagcgttcctgtgccatcccctggca
gactgggagagggtgaggacagacgacgtgtgggacgtgtacgagaccctggggctggcg
gcggccaaaaagaggctgtacgagctaatgtttagctgcgtgggggacaacctgtacccg
gctcacatcaagctcctgacggacaggatgatgagaaggggcaggcccactcccatagac
aggtacaccatgaggacgtgcgaggtcggacccctgagcagggcggccttcgaggagtcc
ctagatatcctgacgggagccgggtgcacggcggaaactgagcactgcgccggagccgga
gcgagggtagcggcgggtctacccgtgagagccggtacggggtacatggggctcttgtgc
ggcaagggtttctttgacgagcccatggtgaaggtgccggaggcggacggcagagagtac
gtggactattcctactctgacgatgaatcctttgagtggtgctaa
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