KEGG   Viruses: 3678211
Entry
3678211           CDS       T40000                                 
Symbol
ATVp44
Name
(RefSeq) Ambystoma tigrinum virus; DNA dependent RNA polymerase II
  KO
K26369  Iridoviridae putative DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
Virus
265294  Ambystoma tigrinum virus
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_7 RNA_pol_Rpb2_1 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_4
Other DBs
NCBI-GeneID: 3678211
NCBI-ProteinID: YP_003815
RS: NC_005832
UniProt: A0A0U2RQ57 Q6YH81
LinkDB
Position
NC_005832:41447..45112
AA seq 1221 aa
MSRGMTTEGASLTAAASSSASAWLTESTPSTPSSSGSSYPALSTFSSCSNSASSPDESDP
MSEMSPKISVASMILLKDLEEFLHLYVSSANMHPSNFVRHHIESFDDMLWNEFPAMVARE
KPVSVKGYRVKFGTVRYEPPCPDGKPWEKLTPAMARRTDATYHSAAVCDLTVTDPKGLEI
VYPRLELCKIPVMVGSAVCWTRTEGSPLPGECPSDPGGYFIIKGKERVVVPHIRPAYDQP
CVYKNCDGWLCEFRSVNRETRQTVLVQAKTDCRRKLEFSLPYIKQYVPVGLVFKALGKTA
REAVAMCGLGSFSGDEVSCRTVHHQSMAALLMEQHASAPEDPVADLAKHVPDGRFVYLKQ
AEGAKQAEDADRASVEEDRNSKGSKEDYVRHILAGEIFLHGGDAAEHLGWMVKRMADAAS
GIGTCTDRDDLANKRVDATGPLIAFLLDGLLKQYVKLFVKSAGCQKNLCPYTVLQNSMVM
TNSLHMCFATGNWTVKRLGPPSYVRVGVSQVLSNNNYGARVSHLRRIMHAVSFRGKNIRM
RQLHSSHYGFLCPYETPEGEKVGIVLNMAEGVGFSLETPREAVLATVRLGKGLPGFFEGA
PARLAWSGAAGSASVDVDGVLCGVTGDPVGFVREARLCLLGVSVVWKKVEREIHLLGCQG
RFVRRVLDPEGIRGSRYDNPPPPEERDIEMDPAPSSSPSDFLPRPPGVYVCAQELSVCSL
GDGEYADPPASEILTDAMSSVIPFYDHTQSPRNAYQSNMGKQAIGFPAVNCSDRYDATLH
RLDYPQKSLVDSRSVKRLGFDEMAHGALPVVAIMTAGGFNQEDSVVLNASSLDRGLFSCV
TYRTVSCADKRRTKYDSEVVCLPDWGLRNREWDYDLLGDDGVIDPLCAGALVRRVEGKRK
AAKRPVDQRTGGGPAGLCDALWIPAGTVLVGKVSHSLGPEGNPVRRDASLTVKQSEEGYL
DRVTVDVDSDGKKLVKVRLRTPRHPEMGDKFASFTAQKGTCGAVLTQEDMPFDKNGVVPD
LIINPHAFPSRMTVNYLLQMCFGTAACKLGKTYDATAFEREDVVRDIAEAAKEAGIDCWD
SVLYSGSTGRRLPTKIFMAPCPYQRLRHMVSGKMHSRTHGPTDALTRQPVAGRSREGGIK
IGEMEQWCKISHGVSESLKESVYDTSDKYEVPVCKECGRISDHFEYCRMCDATDVSLVKL
PYTTKILFQELRSIGISIAFK
NT seq 3666 nt   +upstreamnt  +downstreamnt
atgtccaggggcatgactaccgagggcgcctccctgacggcggcggcctcctcctcggcc
tcagcctggttgactgaatcgactccgtcgaccccgtcgtcatcgggctcctcgtaccct
gccctctcgacgttttcgtcgtgctcaaactctgcctcgtccccggacgagtcggaccca
atgtctgagatgtctccgaaaatatctgtcgcgtccatgattcttttgaaagacctggaa
gaattcttgcatttatacgtttcaagtgcaaacatgcatccatccaattttgtgagacat
cacatcgagtctttcgacgacatgctatggaatgagttcccggccatggtggccagggag
aaacccgtcagcgtcaagggctacagggtaaagtttgggaccgtgaggtacgagcccccg
tgcccagacggcaaaccctgggagaagctcaccccggcgatggccaggaggaccgacgcc
acctaccactctgcggcggtgtgcgacctaacagtcacggaccccaaggggctggagatt
gtctaccccaggctggagctgtgcaagatacccgtcatggtcggttcggccgtgtgctgg
accaggaccgaggggtcacctcttccgggggagtgtccctccgaccccggcggatacttt
attatcaagggaaaggagagggtggttgtgcctcacatcaggcccgcctacgaccaaccc
tgcgtctacaagaactgcgatgggtggctgtgcgagttcaggagcgtcaacagggagacg
aggcagactgtcttggtccaggccaagactgactgcaggcgcaagctagagttttccctg
ccatacatcaagcagtacgtgcccgtgggactggtctttaaggcccttggaaaaactgcg
agggaggccgtggccatgtgtgggctggggtccttttcgggagacgaggtctcgtgcagg
acggtccaccaccagagcatggcggccctcctcatggagcagcacgcgtccgcccccgag
gaccccgtggcggatctggccaagcacgtccctgacggcaggttcgtctacttgaagcag
gccgaaggcgcgaagcaggccgaagacgccgatcgggcctctgtggaagaggaccgcaac
tccaagggctccaaggaggactacgttaggcacatcctggccggagaaatctttcttcac
ggcggagacgctgcggagcacctggggtggatggtcaagaggatggcggacgcggcgtcg
ggtatagggacctgcacagacagggatgacctggccaacaagagggtggacgccaccggg
ccccttatcgccttccttctggacgggctcctaaagcagtacgttaagctgtttgtaaag
tccgcggggtgtcagaagaacctgtgcccctacacagttttgcaaaactctatggtcatg
accaacagcctgcacatgtgcttcgccacaggcaactggacagtcaagaggctcggcccc
ccttcttatgtgagggtcggtgtgtctcaggtcctctccaacaacaactacggagccagg
gtgagccacctcaggcgcatcatgcatgccgtgagcttcaggggtaaaaacatcaggatg
aggcagctccactcttctcactacgggttcctgtgtccctacgagacgcccgagggagaa
aaggtgggtatagtcctcaacatggccgagggggtggggttctccctggagacacccagg
gaggccgtgctggccaccgtcaggctgggaaagggcctgccgggcttctttgagggcgct
cccgccaggctggcgtggtccggcgctgcggggtccgcgtctgtggatgtggacggggtc
ctgtgcggcgtgacaggtgaccccgtggggttcgtgcgggaggccaggctctgtctcctc
ggcgtgagcgtagtgtggaaaaaggtggagagggagatacacctcctcgggtgccaggga
aggttcgtgaggagggtgctggacccagaggggattagggggtccagatacgacaatcct
ccgccccccgaggagagggatatagagatggaccccgctccatcctcgtccccgtcggac
tttctccctcgccctccaggagtctatgtgtgcgcccaggagctgtctgtgtgctctctt
ggggacggagagtacgccgaccctcccgcctctgagatactgactgacgccatgtcttcg
gtcatacccttttacgatcacacccagagccccaggaacgcctaccagtccaacatgggg
aagcaggccataggcttccccgccgtaaactgttcagacaggtacgacgccaccctgcac
aggctggactacccccaaaagagcctggtggactctaggtccgtaaagaggctgggtttc
gacgagatggcccacggggccctgccggtggtggccatcatgacggcgggaggcttcaac
caagaggacagcgtagtcctcaacgcatcctcgttggacaggggccttttttcctgcgtc
acctacaggaccgtgtcctgcgccgacaagaggaggacaaagtacgacagcgaggtggtg
tgcctccccgactggggcctgaggaacagagagtgggactacgacttgctgggagacgac
ggggtgatagacccgttgtgcgcgggggccctcgtcaggagggtagagggaaagagaaag
gcggccaagaggcccgtggaccaaaggacgggaggaggtcccgcgggactgtgcgacgct
ctgtggataccggcgggcacggtcctggtggggaaggtgtctcactccctgggaccggaa
ggcaaccccgtgaggagggacgcatccctgactgtaaagcagtctgaagagggctacctg
gacagggtaactgtggacgtggactctgacggcaaaaagctcgtcaaggtgaggctgagg
acccccaggcacccagagatgggcgacaagtttgcgtcgttcacggcgcaaaaggggaca
tgcggagccgtcctgacccaggaggacatgcccttcgacaaaaacggggtggtgcccgac
ctcatcatcaacccccacgcctttccctccaggatgaccgtaaactacctcttgcagatg
tgcttcgggaccgcggcgtgcaagctgggcaagacctacgacgccaccgccttcgagagg
gaggacgttgtgagggacattgcggaagcggcgaaagaggctggcatagactgctgggac
agcgtcctctactcgggctcgacgggcaggaggctccccacgaagatctttatggcgcct
tgtccctaccagaggctcaggcacatggtgtctggaaaaatgcacagtaggacccacgga
cccaccgacgctctcacccggcagcccgtggcgggcaggtccagggaggggggcataaag
atcggggagatggagcagtggtgcaaaatctctcacggggtctcagagtccctgaaagag
tctgtgtacgacacgagcgacaagtacgaggtcccggtgtgcaaagagtgcggcaggatc
tcagaccacttcgagtactgcaggatgtgcgacgcgacggacgtgtctttggtgaagctc
ccctacacgaccaagattctgtttcaggaactgaggtccatcgggatttccatagccttc
aagtga

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