Viruses: 3707778
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Entry
3707778 CDS
T40000
Symbol
ORF1a, GLRaV2_gp1
Name
(RefSeq) Grapevine leafroll-associated virus 2; polyprotein
KO
K21077
Closterovirus replicase polyprotein 1ab
Virus
64003
Grapevine leafroll-associated virus 2
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Peptidase_C42
DUF3614
Vmethyltransf
Viral_helicase1
AAA_19
AAA_30
Helicase_RecD
Chropara_Vmeth
UvrD-helicase
Zemlya
Motif
Other DBs
NCBI-GeneID:
3707778
NCBI-ProteinID:
YP_337911
RS:
NC_007448
UniProt:
Q49IH3
LinkDB
All DBs
Position
NC_007448:106..8916
Genome browser
AA seq
2936 aa
AA seq
DB search
MSSLAISTLPCSVAQLSFGQPVAAVAKSFLMTSLPSLQTYPSLSELTSFSFCFGVFQNLK
MFMSFLRSVHVFASFSELSTFGSCYEFIRLGGGAHPLFFCSFQCGPLSVSLGLVNGVFAV
LNLSFPFLSNASLLMDVGKDVVQVKRKISKLEKKQKKRVFSMARAAARYVPSPRNPKEKR
AVHVQPLPSGSFRFSQDKNKTELIILSKEAGLVARVKCSACVVRRRGYGGAVKSVALIAL
SPFGVKFRCFAPSCSTSACLKLRIVRRVAVGDCRGEKVIAARRAELQKQNFNSRTPKKVR
ENPAGALEANSEASATSRVIFFGSFTQPFALYPHQESAKANMQHPPVSVVTVERAVAKVA
PERSVVDKVPTSVGVSPQRGVFSPPTVVRNCGDIVVTGVVHEALKKIKDGLLRFRIGGDM
RFSRFFSSNYGCRFVANVRTNTTVWLNCTKASGEKFSLAVACSVDYVAMLRYVCGGKFPL
VLMSRINYQDGHCYLAHMRYLCAFYCRPFRESDYALGSWPTVARLKACVEKNFGVEACGI
ALRGYYTSRNVYHCDYDSSYMRGFRNLSGRVGGGSFDPSSLTSVITVKTSGLPDSRPKSI
VFGAFRCDIRYIEPADSGGVQSSAKMKREEVRRVVKKCAAGEAAAQSRRKKIEEKYRDGI
PDGGFPHLLAGNLNEVRRKVAAGVLRFRVGGDMDFHRSFTTHSGYHLLVWRRSSRSVCIE
LYSPSKAFLRYDFLPCSVDYAAMFSFAAGGRFPLVLMTRIKYLNGFCYLAHCRYACAFLL
KGFDPKRFDIGAFPTAADLRRRMVSVLGDRSLGLNLYGAYTSRGVFHCDYDAKYIKDLRR
MSAVIAGKDGVEEVVPSDITPAMKQKTIEAVYDRLYGGTDSLLKLSIEKDLIDFKNDVQS
LKKDRPIVKVPFYMSEATQNSLTRFYPQFELKFSHSSHSDHPAAAASRLLENETLVRLCG
NSVSDIGGCPLFHLNSKTQRRVHVCRPVLDGKDAQRRVVRDLQYSNVRSGDDDKILEGPR
NVDVCHYPLGACDRESSAMMMVQVYDASLYEICGAMIKKKSHITYLTMVTPGEFLDGREC
VYMESLDCEIEVDVHADVVMYKFGSSCYSHKLSVIKDIMTTPYLMLGGFLFSVEMYEVRM
GVNYFKITKSEVSPSVSCTKLLRYRRANSDVVKVKLPRFDKKRRMCLPGYDTIYLDSKFV
SRVFDYVVCNCSAVNSKTFEWVWSFIKSSKSRVIISGKIIHKDVNLDLKYVESFAAVMLA
SGVRSRLASEYLAKNLSHFSGDCSFIEATSFVLREKIRNMTLNFNERLLQLVKRVAFATL
DVSFLDLDSTLESITDFAECKVAVELDELGCLRAEAENEKIRNLAGDSIAAKLASEIVVD
IDSKPPLRQMSNSSSENVDKREIQRPGLRGGSRIGVVGEFLHFVVSSALRIFKYATDQQR
IKSYVRFLDSAVSFLDYNYENLSFIMQVLSKGYSCMFTFFANRGDVSSRIRSAVCAVKEV
AASCASASVSKAKVMITFAAAVCAMMFNSCGFSGDGREYKSYVHRYTQVLFDTIFFEDSS
YLPIEVLSSAICGAIVTLFSSGASVSLNAFLLQITKGFSLEVVVRNVVRVTHGLSTTATD
GVIRGVFSQIMSHLLVGSTGNVAYQLAFIAGVVPLLVKKCVSLIFIMREDTYSGFIKHGI
SEFSFLSSVLTFLKGKLVDELKSVIQGVFESNKHVFKEATQEAIRTTVMQVPVAVVDALK
CAAGRVYNSFASRRTFGKDNGSSSEDACEEYFSCDEGDGPGLKGGSSYGFSVLAFFSRII
WGARRFIAKMKHECFGKLFDFLSLRLHEFRTRVFGKNRADVGVYDFLPTDIVETLSSIEE
CDQIEELLGDDLNGVKDDSLTDMSYFEFSEDFLASVEEPPFAGLRGGSKNVTILAILEYV
YNLFRIVANKCSKGPLLVAFAELSSALIERFKGKFSRKNKIFTIVREYALSSLRCRMRAL
GLNNDFVVNSFADLLPMLVKRKVSNSFLSSVYRPIKSFSYMCASAERREKFLALVCLVGL
SLPFFVRIVGAKACEELVSSARRFCERVKVFLKQKCVSLLSFLSCLFFSDAGDSSASAGL
RGGASRVTLFHLFVRLASALLSLGWEGLKLLLSHHNLLFLCFAMVDDVNVFVKALGGLSF
FVQPVSSVFAAVLLQPDRFAGYSEKLVTAFEFILKCSPRAPALLKTFFEGVANSTVSKTV
RKLLRFLVRKFKLRKRGGLRADGKGFHRQKAVPVIPSNRITTDGVERLSVKMQGVEALRT
ELRVLEDLDSAVIEKLNRRRNRDTSDDEFTRPAYEQIQEVTTFCSKANSAGLALERAVLV
EDAVKSEKLSKTIDEMARKGATTSDEVAVALSDDEAVEEISVAEERDDSPKTVRMSEYLN
RLNSSFEFPKPIIVDDNKDTGGLTNAVREFYYMQELALFEIHSKLCTYYDQLRIVNFDRS
VAPCSEDAQLYVRKSGSTIVQGKEARLHIKDFHDHDFLFDGRISINKRRRGGNVLYHDNL
AFLASNLFLAGYPFSRSFVFTNSSVDILLYEAPPGGGKTTTLIDSFLKVFKKGEVSTMIL
TANKSSQVEILKKVEKEVSNIECQKRKDKRSPKKSIYTIDAYLMHHRGCDADVLFIDECF
MVHAGSVLACIEFTRCHKVMIFGDSRQIHYIERNDLDKCLYGDLDRFVDLQCRVYGNVSY
RCPWDVCAWLSTVYGNLIATVKGESEGKSSMRINEINSVDDLVPDMGSTYLCMLQSEKLE
ISKHFIRKGLTKLNVLTVHEAQGETYARVNLVRLKFQEDEPFKSIRHITVALSRHTDSLT
YSVLAARRGDATCDAIQKAAELVNKFRVFPTSFGGSVINLNVKKDVEDNSRCKASSAPLS
VINDFLNEVNPGTAVIDFGDLSADFSTGPFECGASGIVVRDNISSSSITDHDKQRV
NT seq
8811 nt
NT seq
+upstream
nt +downstream
nt
atgtctagcctagctatctctacccttccctgctcggttgctcaattgagctttggtcag
cctgttgccgcggttgccaagtcatttttgatgacttcccttccgtcccttcagacttat
ccatctctgtctgagttgacttccttttctttttgttttggtgttttccaaaatttaaaa
atgtttatgtctttcctgcgttcggtgcacgtttttgcatctttttctgagctttccacg
tttggttcatgctatgaattcattcgcttaggaggtggtgctcatcctctcttcttttgt
tccttccaatgcggacctttgtccgtttctctgggtcttgttaacggtgttttcgctgtt
ttaaacctctcctttccctttttaagtaacgcgtctctcttgatggatgtcggaaaagat
gtagttcaagtaaaaagaaaaatttccaagcttgagaagaagcagaagaagcgtgttttt
tcgatggctcgcgctgccgcgcgttatgtgccttccccacgcaatcctaaggagaagcgt
gctgttcatgtacagcctctccctagtggttcttttcgattttcccaagacaaaaacaaa
acagaactaatcatcttaagcaaggaagcgggtttggtcgcacgcgttaagtgctcggcg
tgcgttgtgcgccgccgcggatacggtggcgcggtcaagagcgtagccctaatagccctt
tcccctttcggcgtgaaattccgttgtttcgcgccgtcttgcagcacatccgcttgtctg
aagcttagaatagtgcgtcgtgttgcagtcggtgactgccgaggtgagaaggttatcgcg
gcgcgacgtgcggagctgcagaagcagaatttcaacagccgtacaccgaagaaggtgcga
gagaaccccgctggcgccctcgaggcgaactcggaagcttctgccacttctagggtcatt
ttcttcggcagtttcacgcagccctttgcgttatatccgcaccaagagagcgcgaaagcg
aacatgcaacatccaccggtcagtgtggtgacggtggagcgcgcggttgcgaaggtggct
cccgaacgaagcgtggtcgacaaggttcctacgtccgtaggcgtctccccgcagcgcggt
gtgttttcccctccgacggtggttcggaactgcggtgatatagttgtaacgggggtggtg
catgaagccttgaaaaagattaaagatgggctcttgcgcttccgcataggcggtgacatg
cgtttttcgaggtttttctcctcgaattacggctgtaggttcgtggcgaacgtgcgcacc
aacactactgtttggctgaattgcacgaaggcgagtggtgaaaaattttcactggccgtc
gcttgctcagtggattacgtagcgatgctgcgatacgtgtgtggcgggaagttccctctc
gtcctcatgagcagaattaactaccaggatgggcactgttacctggcccatatgcggtat
ctgtgcgccttttactgtcgcccgtttagagagtcggactacgccctcggatcgtggcca
acggtggcgcgtctcaaggcatgtgttgagaaaaacttcggtgtcgaagcttgtggtata
gctcttcgcggctattacacctctcggaatgtttatcactgcgattacgactcttcctat
atgaggggttttagaaatctttccggccgcgttggtggtggatccttcgatccgtcatct
ctaacttccgtaataacagtgaagacgagcggtcttccagatagtcgtcctaaaagtata
gtgttcggcgcttttcgctgcgatatacgttatattgaaccggcagactcgggtggcgta
cagtcgagcgctaagatgaaacgagaggaagtacgccgagtcgtgaaaaaatgcgcagcg
ggcgaagctgctgcacaatcgcgacggaagaagatagaagagaaatatcgcgacggaatt
cctgatggaggatttccgcatcttttggccggtaaccttaatgaagttaggaggaaggta
gcggccggggttctgcgattccgcgttggtggtgatatggattttcatcgctcgttcacc
actcattcaggctatcatctgttagtgtggcgccgctcgagccggagcgtatgcattgag
ctttactcaccatcaaaagcctttttgcgttacgattttttgccttgttccgtggactat
gctgcgatgttttcttttgcggcgggtggtcgcttccctttagttctgatgactagaatc
aagtatctaaatgggttctgttatttagctcattgccggtatgcgtgcgcgtttttgtta
aaaggttttgacccgaagcgttttgacatcggtgcttttcccaccgcggcggaccttaga
agacgtatggtttcggtgcttggtgatagaagtttaggcttgaatttgtacggcgcgtac
acgtcacgcggcgtttttcattgtgattacgatgcgaagtatataaaagatttacgtcgt
atgtcggcggttatagctggaaaggacggggtagaagaggtagttccttctgacataact
cctgctatgaagcagaagacgattgaagccgtatatgatagattgtatggcggcaccgac
tcgttgctgaagctgagcatcgagaaagacttaatcgacttcaaaaacgacgtacagagt
ctgaagaaagatcgaccaatcgtcaaagtccccttttacatgtcggaagcaactcagaat
tcgctgactcgtttctaccctcagttcgaacttaagttttcgcactcctcgcattcagat
caccctgccgctgccgcttctagattgctggaaaacgaaacgttagtgcgcttgtgtggt
aatagcgtttcagatattggaggttgtcctcttttccacttgaattctaagactcaaaga
cgggttcatgtgtgtagacctgtattggacggcaaagatgcgcagcgtcgcgtggtgcgt
gatttacagtattccaatgtgcgttcgggagacgacgataaaattttggaagggccgcgc
aacgttgatgtctgccactatcctctgggtgcttgcgaccgcgagagtagcgctatgatg
atggtgcaggtgtacgatgcgtccctttacgagatatgtggtgccatgatcaagaagaag
agtcatataacctacttaaccatggtcacacccggcgaatttcttgatggacgcgagtgc
gtctacatggagtcgttggactgcgagattgaagttgatgtgcatgcagacgtcgtgatg
tacaagtttggtagctcgtgctactcgcacaagctttcagtcatcaaggacattatgacc
actccatacttgatgttaggcgggtttctgtttagcgtggagatgtatgaagtgcgcatg
ggcgtgaattacttcaaaatcacgaagtccgaggtatcgcctagcgttagctgcaccaaa
ctcttgagataccgaagggctaatagtgacgtggttaaagttaagcttccgcgtttcgat
aagaagcgtcgtatgtgcctgcctgggtatgatactatatacctagattcaaaatttgtg
agtcgcgtgttcgattatgtcgtgtgtaattgttccgccgtgaattcgaaaactttcgag
tgggtgtggagttttattaagtctagtaagtcgagggtgattattagcggtaaaataatt
cacaaggacgtgaatttggacctcaagtacgtcgagagttttgccgcggttatgttggcc
tctggcgtgcgcagtagactagcgtccgagtacctcgctaagaacctcagtcatttttcg
ggagattgctccttcattgaagcaacatctttcgtgttgcgtgaaaaaatcagaaatatg
actctgaactttaacgaaagacttttgcagttggtgaaacgtgttgcctttgcaaccttg
gatgtgagctttttagatttagattcgactcttgaatcaataacagattttgccgaatgt
aaagtggcagttgaactcgacgagttgggttgcttgagagcggaagccgagaatgaaaaa
attaggaatctggcgggagattctatcgcggctaagctcgcgagtgagatagtggttgac
atcgactctaaacctccgttgaggcagatgagtaactcatcatccgaaaatgttgataag
cgggaaattcagagacccggattgcgtggtggttctagaatcggggttgttggggagttc
cttcacttcgttgtaagttctgctttacgtatttttaaatacgcgacggatcagcaacgg
attaagtcttacgtgcgctttttggattcagcggtttccttcttagattacaattacgag
aatctgtcgtttataatgcaagtactttcgaaaggttattcgtgtatgttcacgtttttt
gcgaatcgcggcgacgtatccagtcgcatccgtagcgcggtatgtgctgtgaaagaagta
gctgcctcgtgcgcgagcgcgagcgtttctaaagctaaggtcatgatcaccttcgcagca
gccgtgtgcgctatgatgtttaatagctgcggtttttcaggcgatggtcgggagtataaa
tcgtacgtacatcgttacacacaggtattgtttgacactatattttttgaggacagcagt
tacttacccatagaagttttaagttcggcgatatgcggtgctatcgtcacgcttttctcc
tcgggcgcgtccgtaagtttaaatgctttcttgcttcaaattaccaaagggttctcctta
gaggttgtcgtccgaaatgttgtacgcgtcacgcatggtttgagcaccacggcgactgac
ggcgttatacgtggggtgttctcccaaattatgtctcacttacttgtcggaagtactggt
aacgtggcttaccagttggccttcattgccggggtagtgcctcttttagtcaaaaagtgc
gtgagcttaatttttatcatgcgtgaagatacctactccggttttattaagcacggaatc
agtgagttttcttttcttagtagtgttctgacgtttttgaagggtaagctcgtggatgag
ttgaaatcggttattcaaggggtttttgaatccaacaagcacgtgtttaaagaagccact
caggaagcgattcgcacgacggtcatgcaagtacctgtcgccgtggtggatgcgcttaag
tgcgccgcaggaagagtttataatagttttgctagtcgacgtacctttggtaaggataac
ggctcttctagcgaagacgcatgcgaagagtacttttcgtgcgacgaaggtgatggccca
ggtctgaaaggaggttccagctatggcttctcagttttagcgttcttttcacgcattatt
tggggtgctcgtcggtttattgctaaaatgaagcatgagtgctttgggaagctttttgat
ttcctatcgctcaggcttcacgagttcaggactcgcgttttcgggaagaatagagcggac
gtgggagtttacgatttcttgcccacggacatcgtggaaacactctcatcgatagaagag
tgcgaccagattgaagagctactcggtgatgacctgaatggtgtcaaggatgattcgttg
accgatatgagttactttgagttctcagaagactttttggcgtctgttgaggagcctcct
ttcgccgggctgcgaggaggtagcaagaacgtaacgattttggcgattttggaatacgtg
tataatttgtttcgtattgtcgccaacaagtgttcaaaaggacctttattggttgctttc
gctgaactttcaagcgccctaatcgagaggtttaaagggaaattttctcgtaagaacaaa
atatttactattgtgcgcgagtacgctctgagttccctccgatgtcgcatgcgcgcgttg
ggcttgaacaacgatttcgtggtgaattctttcgctgatttgctacctatgttggtgaag
cggaaggtttcgaattcattcttaagtagcgtttatcgcccaatcaaaagtttctcatat
atgtgtgcttcagcggagcgacgcgagaaatttttagctctcgtgtgtttagtcgggtta
agtcttcctttcttcgtgcgcattgtaggtgcgaaggcgtgcgaggagctcgtgtcttca
gcacgtcgtttttgtgagcgcgttaaagtttttctaaaacagaagtgtgtctctcttctt
agctttttaagttgtttatttttctctgatgctggtgatagctccgcatccgcggggctg
aggggtggcgcgtcgcgagtgacgctattccacctcttcgttcgcctcgcgagtgctctt
ttatctttagggtgggaagggctgaagctactcctatcgcaccataacctattattttta
tgttttgcgatggtcgacgatgtgaacgtctttgtcaaggctttggggggtctttctttc
tttgtgcaaccggtttcttccgtgttcgcagcagtacttttgcaaccggacagattcgcg
gggtactccgagaagcttgttacagctttcgaattcatcctaaagtgttcgcctcgcgcg
cctgcgctactcaaaacgttttttgagggcgtggcgaacagtactgtatcaaaaaccgtt
cgaaaacttcttcgattcttagtgaggaagtttaagcttcgaaaaagaggagggttgcgt
gcagacggtaagggttttcaccggcagaaagctgtgcccgtcataccttctaatcggatc
acgactgacggagttgaaaggctttcggtgaagatgcaaggagttgaggcgttgcgtacc
gaattgagagtcttagaagatttggattccgccgtaatcgaaaaactcaacagacgcaga
aatcgtgatactagtgatgacgaattcacgcgccctgcttatgagcagatacaagaagtt
accactttctgttcgaaagctaactctgcaggtttggccctggaaagagcagtgcttgta
gaagacgccgtgaagtcggaaaaactttctaagactattgacgagatggcgagaaaaggg
gcgactactagtgacgaagtagcagttgctttatctgacgatgaagccgtggaagaaatc
tccgttgctgaagagcgagacgattcgcctaagacggtcaggatgagcgaatacctgaac
aggttaaattcaagcttcgagtttccgaagcctattattgtagacgacaataaggatacc
gggggtctaacgaacgctgtgagggagttttattatatgcaggaacttgctcttttcgaa
attcacagcaagctgtgtacctactatgaccaactgcgcatagtgaacttcgatcgatcc
gtggcaccgtgcagcgaggatgctcagctgtacgtacggaagagcggctcaacgatagtg
cagggtaaagaagcgcgtttgcatattaaggatttccatgaccacgatttcttgtttgac
ggaagaatttccataaacaagcggcggcgaggaggtaatgttttataccatgataatctt
gcgtttctagcgagtaatttattcttagctggctaccccttttcaagaagcttcgttttc
acgaattcatcagttgatattctcctttacgaagctccgcccggaggtggtaagacgacg
acgctaatcgactcattcttgaaggtcttcaagaagggtgaggtttccactatgatctta
accgctaacaaaagttcgcaggttgagatcctaaagaaagtggagaaagaagtgtctaat
atcgaatgccaaaaacgtaaggacaagaggtctccgaagaaaagcatttacaccatcgac
gcttatttaatgcatcaccgtggttgtgacgctgacgttcttttcatcgatgagtgtttc
atggttcatgcgggcagcgtgctagcttgcattgaattcacgaggtgccataaagtaatg
atcttcggtgatagccggcagattcattacattgaaaggaatgatttggacaagtgtttg
tatggggatctcgataggttcgtggacttgcaatgtcgggtttatggtaatgtttcatac
cgttgtccatgggatgtgtgcgcttggttaagcacagtgtacggcaatctgatcgccacc
gtgaagggtgaaagcgaaggtaagagcagcatgcgcattaacgaaattaattcagtcgac
gatttggtgcccgacatgggttccacgtatctgtgtatgcttcaatcggagaagttggaa
attagcaagcacttcattcgcaagggtttgactaaacttaacgttctaacggtgcatgag
gcgcagggtgagacatatgcgcgtgtgaatcttgtgcgacttaagtttcaggaggatgaa
ccttttaagtctatcaggcacataaccgtcgctctttctcgtcacaccgacagcttaact
tacagtgtcttggctgcacgtcggggcgacgccacttgtgatgccatccagaaggctgcg
gaattggtgaacaagtttcgcgtttttcctacatcttttggcggtagtgtcatcaatctc
aacgtgaagaaggatgtggaagataacagtaggtgcaaagcttcatcggcaccactaagc
gtaattaacgactttttgaacgaagttaatcccggtaccgcagtgattgattttggtgac
ttgtccgcggacttcagcactggaccttttgagtgtggagccagcggtatcgttgtgcgg
gacaacatctcctccagcagcatcactgatcacgataaacagcgtgtttag
DBGET
integrated database retrieval system
