KEGG   Viruses: 37618998
Entry
37618998          CDS       T40000                                 
Symbol
D1S36_sLgp1
Name
(RefSeq) Alajuela virus; RNA-dependent RNA polymerase
  KO
K25345  Peribunyaviridae RNA-directed RNA polymerase L [EC:2.7.7.48 3.1.-.-]
Virus
1552846  Alajuela virus
SSDB
Motif
Pfam: Bunya_RdRp L_thumb_ring_vir L_protein_N DUF1690
Other DBs
NCBI-GeneID: 37618998
NCBI-ProteinID: YP_009507859
RS: NC_038717
UniProt: A0A097C042
LinkDB
Position
NC_038717:50..6871
AA seq 2273 aa
MNETLEEELKALEGRLKGVRETSDGKELFTAILVRRHDYFGYELCKAMDIPYRNDVKLVD
ILHECFHDIDTGDVTIPNITPDNFIFDGEVLTILDYKVSVSLESTEHTIEKYTKELDKIR
NFLPSRVELCIIRCHPRTTKLTFTNDRIKRMYANIQLELNFEPFENLITELKDRFRDSDE
FLAMIAHGDVTLTVKWCQTGCPELRQHPIFNEFYESLEDEYKEMFDRSMQFSAYSAEKWN
QNLIKIRDQTSDEYKEFVRRNSSELFQTDGNYPEPSKEEILAGWDEMSERIQQTRQMSKD
INDQKPSIHFIWSEHNPKLPTHSTHKLMMVSKLLQNLSSNSDFADDFRQIGKLMDIGDNV
LVYENHCEALKLEARKNLKPIQNRKLNPRRIGSAQVLWEQQFLMSAEDMGKARKVHLLKE
YFGIGRHRDFSHKTNADINMEKPKILDFNDPDIIRMSQIMMEKTSGLLSQQTTLKPNHAI
VDEYMDNIKEANENTFKTIKQILSTKYWSCISDISMLMKNILSVAQYNRSHTFRLAMCAN
NSLYALVLPSADIKSRKSTVVFCIIALHTEEESVFNPGCLHATYKTFTSDKTGWLSISKA
IRLDKERCQRIVTSPGLFLSTVTLLKQDNNSIDLNDVMNFALYTSLNVTKSMLSLTEPSR
YMIMNSLAVSSHVKEYISEKFNPYTKTLFSVYMCNKIKIGCLNAFNQRQKIKLRDIFLTD
FDITQKGISDNRDLTSIWFPGFVTLKEYLNQIFLVFYLNPKGLHEKHHVMIDLLKTVIEI
ELDQRNNIPVPWSDTPKKQTVNLPIFLNSVAINLMHDTAYCTHLRSRIENRNNLRRSFST
ISTFTSSKSCIKIGDFSSLKTEINRKIEKARKAEEKRSRIANPNFIHDEEYKNVVEHCNY
DMMRKAIPEYTDHISTKVFDRLYELQKNGTLTDEPVVGQILEMMVNHKQFFFSFFNKGQK
TAKDREIFVGEYEAKMCMYLVERIFKERSKVNPDEMISEPGDGKLKVLERKAEQEIRFLI
EHIKQRNSPIMEEIENLKESVLFDKSKLEDLVNSKYHGLKLEINADMSKWSAQDVFFKYF
WVVAMDPILYPEEKERIIYFFCNYMNKRLIIPDEVIYTILDQQIPYKNDMVMQVTNGLHS
NTFNVKRNWLQGNFNYMSSYVHSCAMSVYKDILRTAAKKIEADIMVNSMVHSDDNQTAIC
LINNRLDTRVFTKFAIQLFEKICLTFGCQANMKKTYVTNHIKEFVSLFNLYGEPFSVYGR
FTLTAVGDCAYIGPYEDLASRISSTQTAIKHGCPASLAWLSISISHWITYLTYNMLPGQI
NDPSVSLGIENRREIPIELGGYLEANLSMIALAGLESGNIQFLINLLTKMVNPILFRENV
VSQCSDIKNWDLTRLTFSEIFRLKVLRFLALDAEMDCSDTMGETGEMRSRSLLTPRKFTT
AGSLRKLVSFGDFQACQSEPEGINTVVEYMIEHPELLVTKGETAEDYKNIVLYRYNSRRF
KESLSIQNPAQLFLEQILFSHKPIIDYTGIQEKYLNLSDSTVTEDQPEILGRVTFPEAFR
KIREDLSTLKITINDIQTVYDFVILNDPMVIAIANAHLLSNQGAMQDRLGSSCSTMPEFR
NLRLITHSPALVLRSYSTGRYDVPGADPDEMRRDRTHLQEFIDNTKLLLKMEQRIEQNEK
AKGSRDILFEIKEITKFYQVCYEYIKSTEHKVKVYILPVKCYTTTDFCAAIQGSLIKDKQ
WAVIQHIHPVSAGGHKGIVQKHTTNEIKLAEDCMRLIAFFIDTFIDENHRIYMFKRMVDE
FTYSGRKVSDLLEIIATSKNRVDFLPILYRSGLLEQRDLDSYDALKSSGRPTWNKWQTTR
ALDMGKIDLSIDTHRSSIRIIGEDRNLHYAELYLPSINYDSITRSGYKLLNAKHGLKFQS
MSEVSVRKDEWYITYQRKSRDNYVYKIFYGKKLLNPLPDHDLRYNRTTNPIVPVCHVIPM
VRPDIDRIMLEDMDSLNIENFKIGVLNTGIGEQARLRRCMLHKMKNFEGPDIKSKVINLT
KLMKDNTLMSLNYDNVCNVHLSQFCKLLDCNGNEGTLDDAMYSFSDEPMEQTQIDEIECT
PIFKVQYSVPGSRYLNYRNAIKELLSREIRQFREAFTLVGDDFDSPENIGYLENIICIID
QLQTNEWSTIMKKCIHICFLASNQDHVFHTFSLNKYFFEGNTPASGRLNWRNLKSFIISL
PEIKSAPWRNIFSSFKLKCIALLDREIAKVEVNQDFSKILAREDLRQSFFNFF
NT seq 6822 nt   +upstreamnt  +downstreamnt
atgaatgaaacactagaagaagaactgaaagctctggaaggaagactcaaaggcgtaaga
gaaacttccgacggaaaagagcttttcacagctatactagttcgtagacatgactacttt
ggttatgagctttgcaaagcaatggatataccttaccggaatgatgtgaagctggtagac
attttgcacgagtgttttcatgacattgacacaggggatgtcacaattcctaatatcaca
cctgacaacttcatattcgatggcgaggttttaactattttagactacaaagtttctgta
tctctagagagtactgaacatacaatagagaaatataccaaagagctggataagatcaga
aatttcctaccatcaagggttgaactttgtatcataagatgccatccaagaacaacaaaa
ctaacattcacgaatgacagaataaaaagaatgtatgccaacattcaattggaactcaat
ttcgagccatttgaaaatctaataacagaattaaaagacagatttagggatagtgatgaa
ttcttagctatgattgctcatggtgatgtgacattaacagtaaaatggtgtcagacaggg
tgtccagaattaaggcagcacccaattttcaatgaattttatgagagtcttgaagatgaa
tataaagagatgtttgatagatctatgcaattttctgcatattctgctgagaaatggaac
caaaatctaataaaaatacgagatcaaacctcagatgaatataaagaatttgtgaggaga
aattcatctgagctcttccaaactgatggaaattatccagaacccagtaaagaagaaata
ctagcagggtgggacgaaatgtctgagcgaatacaacagaccaggcaaatgtctaaggat
atcaatgatcagaaaccaagcatccatttcatatggagtgaacataatccaaaattacca
acgcattcaactcacaagttaatgatggtgtcaaaattactgcaaaatttatcaagcaac
agtgactttgctgatgattttaggcaaataggtaagcttatggacataggtgacaatgtg
ttagtttatgaaaaccattgtgaagcactaaaattagaggctagaaagaatctgaaacct
atacagaatagaaaactgaatccaaggagaataggtagtgctcaagttctttgggagcaa
cagtttttgatgtctgctgaagatatgggtaaagcccgtaaagttcacttgcttaaagaa
tattttggaataggacggcatagagactttagccataaaacaaatgcagatataaacatg
gaaaagccaaaaatattggattttaatgatccagacataataaggatgagtcagataatg
atggaaaagacttcaggcttactatcccagcagacgacgcttaagccaaatcacgcaatt
gtagatgagtacatggataatataaaagaggcgaatgaaaacacatttaagactattaag
cagatactatcaacaaaatattggtcttgtatctcagacatttcaatgctgatgaaaaac
atattgtctgtagctcagtataatcgatcacatacttttagactggcaatgtgtgctaac
aactctctatatgcattagtactaccatctgctgatataaagagtagaaagtcaacagtg
gttttctgcataattgcattacacactgaagaagaatcagtttttaaccctggatgctta
catgcaacatataaaacattcacaagtgataaaacagggtggttatcgatttctaaagct
atacgacttgacaaagaaagatgtcagaggattgtgactagtccaggtttatttttatca
acagtgaccctattaaaacaagacaataactcgattgacctcaatgatgtgatgaatttt
gcattgtacacaagtttgaatgtgaccaaaagcatgttgtcactaacagagccttctcgt
tacatgataatgaattcacttgctgtatctagtcatgtaaaagagtatatatcagaaaaa
tttaatccgtacactaaaacactattcagtgtctatatgtgcaacaaaattaaaatagga
tgccttaatgccttcaatcaacgacagaaaataaaattgagagatatctttttaacagat
tttgacataacccaaaaaggaatatcagataacagagatctaacgagtatatggttccca
ggatttgtcacacttaaagagtatctcaatcagatctttctagttttctatctaaatcca
aaaggtttacatgaaaagcatcatgttatgatagacttattgaaaacagtgatagagatt
gaattggaccaaagaaataatatacctgtgccttggtctgataccccaaaaaaacagact
gttaacctaccaatatttctcaattctgtagctattaacctaatgcatgacacagcctac
tgcactcatcttcgatcacgaatagaaaatagaaacaacttaagacgttctttttcaaca
atttcaacattcacaagtagtaaaagctgcataaagattggagatttttctagtctcaaa
actgaaatcaatagaaaaatcgagaaagccagaaaagcagaggaaaagagaagtagaatt
gcaaacccgaactttatacatgacgaagaatataaaaatgttgtagaacattgcaattat
gatatgatgaggaaagcaataccagaatacacagatcatatctccacaaaagtttttgac
agactatatgagcttcaaaagaatggaactctaaccgatgaaccagtcgttgggcagatc
ttggaaatgatggtaaatcataaacagttctttttctcttttttcaacaaaggacaaaaa
acagctaaagacagagagatcttcgttggtgaatatgaggcaaaaatgtgtatgtatcta
gtcgaacgaattttcaaagaaagatcaaaggtaaatccagatgaaatgataagcgaacct
ggtgatgggaagttgaaagttctagaacgtaaagcagaacaggagattcgattcctcata
gaacacatcaagcagagaaattcgccaatcatggaggagattgaaaatcttaaagaaagt
gtactttttgacaaaagcaaactagaagatctagtaaatagcaagtatcacggactgaaa
ttagaaataaatgcagatatgtcaaaatggagtgcccaagacgtattctttaaatacttt
tgggttgtggccatggatccaatattgtatcctgaagaaaaagaacggataatttacttt
ttttgcaattacatgaataaacgattgataattccggatgaagtgatctatacaattttg
gaccaacaaataccatacaagaacgatatggtcatgcaagtaacaaatggtttacattca
aatacatttaatgttaaaaggaactggctacagggaaattttaactatatgtccagctat
gtccacagttgtgccatgtctgtttacaaagacatacttcgaactgctgcaaagaaaatt
gaagctgatattatggtgaattccatggttcattctgacgacaatcagaccgcaatatgc
ttaatcaacaataggttggacacaagagtctttacaaagtttgcaattcaattgttcgaa
aaaatatgtttgacttttggatgtcaggccaatatgaaaaaaacttatgtcaccaatcac
ataaaggaattcgtttcgctcttcaacctgtatggtgagccgttttcagtttatggaaga
ttcacattaactgccgttggagattgtgcctatattggcccatatgaagacttagcgagc
agaatctcatcaactcaaactgcaataaagcacggatgcccagcaagcttagcttggctt
tcaatctctataagccattggataacatacctgacttataatatgcttccaggacaaatt
aatgatccatcagtttcactgggaattgaaaacaggcgagaaataccgatagaattaggc
ggttatctagaagcaaatctgtcaatgatcgccctagcaggactagaatctggaaacata
caattcttaatcaatttactgacaaaaatggtgaatcctattttatttagagaaaatgtt
gtgtcacagtgctctgacataaaaaattgggatctaaccaggctaactttttctgaaatc
tttagacttaaagtcttaagattcctcgctcttgatgcagagatggattgctctgatacc
atgggagaaacaggagaaatgcgcagtagatctctattaactcctagaaagtttaccaca
gcggggtcattgaggaaactagtttcatttggggattttcaagcttgtcaatctgaacca
gaaggaattaacactgttgtagagtatatgattgagcatcctgaattgcttgtgacaaaa
ggtgagaccgcagaagattacaaaaacattgtattgtacagatacaattcaagacgattc
aaagaatcactatccatacagaatccagcacagttgttcttggaacaaattttattttca
cacaagcccataattgattacactgggattcaagaaaaatatctaaatttgtctgacagc
acagttactgaggatcaaccagaaatactaggcagagtcacatttccagaggcatttaga
aagattagggaggacctatcaacattaaaaataactatcaatgacattcagactgtttac
gattttgttattttgaatgatcctatggtaattgcaatagcaaatgcacatcttctttca
aatcaaggtgcaatgcaagacagattgggatcgtcctgcagtacaatgccagaatttaga
aatcttagattaatcactcactcgccagctctagttcttagatcatatagcactgggaga
tatgatgtaccaggagctgacccagatgaaatgagaagagataggacacacttacaagaa
tttatagacaatacaaagctcctattgaagatggaacagaggatcgaacaaaatgagaaa
gcaaaaggctctagagatatactttttgaaataaaggaaattacaaaattttatcaggtc
tgttatgaatatatcaagtccacagaacacaaggttaaagtatatatcttaccagtcaaa
tgttacactacaactgacttttgtgctgccattcaaggatcattaatcaaagacaagcag
tgggctgtaatccaacatatacacccagtatctgcaggaggccacaaaggcattgttcaa
aaacacacaacaaatgaaataaaacttgcagaagattgtatgagacttatagcatttttc
attgacacatttattgatgaaaaccataggatctacatgttcaaaagaatggttgatgag
tttacatattcaggaagaaaagtttcagacctcctagaaataatagcaacatcaaagaac
agagttgatttcttaccaattctatatcgatctggattattggaacaaagagacttagac
agctacgatgctttgaaatcaagtggtcgaccaacatggaacaaatggcaaacaaccaga
gcactggacatgggcaaaatagacctaagtatagacacacatagaagttcaattagaatt
ataggagaagacagaaatttgcattatgcagaactatatctaccatccataaattatgat
tcaatcacaagaagtggctacaaactgctaaatgctaaacatggcttaaaattccagtcc
atgtctgaagttagtgtaagaaaagacgagtggtatatcacatatcagaggaaatccaga
gacaactatgtttacaaaatattctacggcaaaaaactgttaaacccactaccggaccac
gacttgcgttacaataggacaacaaaccctatagtaccagtctgtcatgttatacctatg
gttagaccagacattgatcgtattatgctggaggacatggacagcttaaacattgagaac
ttcaagattggggttttgaatacaggaataggagagcaagctagactcagaaggtgtatg
ttacataaaatgaaaaactttgaaggaccagacattaagagtaaagttataaacttaaca
aagttaatgaaagacaacactctaatgagcttgaattacgacaatgtttgtaatgtccat
ctttcacaattttgtaaacttcttgattgcaatggcaatgaaggaacactggatgatgca
atgtacagtttttctgacgagcctatggaacagacacaaattgacgaaatagaatgcacc
ccaattttcaaagtccaatacagtgtacctggtagtcgttacttgaattatagaaatgca
ataaaggaattgttatctagagaaattagacaattcagggaagcttttacgttagttggc
gatgattttgattcaccagagaatattggctatttggaaaatataatctgcataattgat
caattgcaaactaatgaatggtctacaataatgaagaaatgcattcatatctgtttcctt
gcatcaaaccaagatcatgtctttcatacatttagcctaaacaaatatttttttgaaggt
aacacaccagcttcagggagattaaactggagaaacttaaagagttttatcataagtcta
ccagaaattaaatccgctccttggaggaatatatttagctcattcaaattaaaatgtatt
gcattattagacagagaaattgctaaagtcgaagtcaatcaagacttttccaagatatta
gcacgagaagaccttagacaaagcttcttcaacttcttctaa

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