Viruses: 37620163
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Entry
37620163 CDS
T40000
Symbol
D1U33_gp047
Name
(RefSeq) Common midwife toad virus; DNA dependent RNA polymerase b subunit
KO
K26369
Iridoviridae putative DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Virus
540070
Common midwife toad virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
Stm1_N
Motif
Other DBs
NCBI-GeneID:
37620163
NCBI-ProteinID:
YP_009508675
RS:
NC_039034
LinkDB
All DBs
Position
NC_039034:45591..49256
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AA seq
1221 aa
AA seq
DB search
MSRGMTTEGASLTAAASSSASTWLTESTPSTPSSSGSSYPALSTFSSCSNSASSPDEADP
MSEMSPKISVASMILLKDMEEFLHLYVSSANMHPSNFVRHHIESFDDMLWNEFPAMVARE
KPVSVKGYRVKFGTVRYEPPCPDGKPWEKLTPAMARRTDATYHSAAVCDLTVTDPKGLET
VYPRLELCKIPVMVGSAVCWTRTEGSPLPGECPSDPGGYFIIKGKERVVVPHIRPAYDQP
CVYKNGDGWLCEFRSVNRETRQTVLVQAKTDCRRKLEFSLPYIKQYVPVGLVFKALGKTA
REAVAMCGLGSFSGDEVSCRTVHHQSMAALLMEQHASAPEDPVADLAKHVPDGRSVYSKQ
AEGAKQAKYADRASVEEDRNAKGSKEDYVRHVLAGEIFLHGGDAAEHLGWMVKRMADAAS
GIGTCTDRDDLANKRVDATGPLIAFLLDGLLKQYVKLFVKSAGCQKNLCPYTVLQNSMVM
TNSLHMCFATGNWTVKRLGPPSYVRVGVSQVLSNNNYGARVSHLRRIMHAVSFRGKNIRM
RQLHSSHYGFLCPYETPEGEKVGIVLNMAEGAGFSLETPREVVLATVRLGKGLPGFFEGA
PARLAWSGAAGSASVDVDGVLCGVTGDPVGFVREARLCLPGVSVVWKKVEREIHLLGCQG
RFVRRVLDPEGIRGSGYDSPPAPEERDIEMDPAPSSSPSDSLPCPPGVYVCAQELSVCSL
GDGEYADPPASEILTDAMSSVIPFYDHTQSPRNAYQSNMGKQAIGFPAVNCSDRYDATLH
RLDYPQKSLVDSRSVKRLGFDEMAHGALPVVAIMTAGGFNQEDSVVLNASSLDRGLFSCV
TYRTVSCADKRRTKYDSEVVCLPDWGLRNREWDYDLLGDDGVIDPSCAGAIARRVEGKRK
AAKRPAGQRTGGGPAGLCDALWIPAGTVLVGKVSHSLGPGGNPVRRDASLTVKQSEEGYL
DRVTVDVDSDGKKLVKVRLRTPRHPEMGDKFASFTAQKGTCGAVLTQEDMPFDKDGVVPD
LIINPHAFPSRMTVNYLLQMCFGTAACKLGKTYDATAFEREDVVRDIAEAAKEAGIDCWD
SVLHSGSTGRRLPTKIFMAPCPYQRLRHMVSGKMHSRTHGPTDALTRQPVAGRSREGGIK
IGEMEQWCKISHGASESLKESVYDMSDKYEVPVCKECGRISDHFEYCRMCDATDVSLVKL
PYTTKILFQELRSIGISIAFK
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggggcatgactaccgagggtgcctccctgacggcggcggcctcctcctcggcc
tcgacctggttgactgaatcgaccccgtcgaccccgtcgtcatcgggctcctcgtaccct
gccctctcgacgttttcgtcgtgctcaaactctgcctcgtccccggacgaggcagaccca
atgtctgagatgtctccgaaaatatctgttgcgtccatgattcttttgaaagacatggaa
gaattcttgcatttatacgtttcaagtgcaaacatgcatccatccaattttgtgagacat
cacatcgagtctttcgatgacatgctgtggaacgagttcccggccatggtggccagggag
aaacccgtcagcgtcaagggctacagggtaaagtttgggaccgtgaggtacgagcccccg
tgcccagacggcaaaccctgggagaagctcaccccggcgatggccaggaggaccgacgcc
acctaccactctgcggcggtgtgcgacctgacagtcacggaccccaaggggctggagact
gtctaccccaggctggagctgtgcaagatacccgtcatggtcggttcggccgtgtgctgg
accaggacagaggggtcacctcttccgggagagtgcccctccgaccccggcggatacttt
attatcaagggaaaggagagggtggtggtgcctcacatcaggcccgcctacgaccaaccc
tgcgtctacaagaacggcgatgggtggctgtgcgagttcaggagcgtcaacagggagacg
aggcagacggtcctggtccaggccaagactgactgcaggcgcaagctagagttttccctg
ccctacatcaagcagtacgtgcccgtgggactggtctttaaagcccttggaaagacggca
agggaggccgtggccatgtgtgggctggggtctttttcgggagacgaggtctcgtgcagg
acggtccaccaccagagcatggcggccctcctcatggagcagcacgcgtccgcccccgag
gaccccgtggcggatctggccaagcacgtccccgacggcaggtccgtctactcgaagcag
gccgaaggcgcgaagcaggccaaatacgccgatcgggcctctgtggaagaggaccgcaac
gccaagggctccaaggaggactacgtcaggcacgtcctggccggagaaatatttcttcac
ggcggagacgctgcggagcacctggggtggatggtcaagaggatggcggacgcggcgtcg
ggtatagggacctgcacagacagggacgacctggccaacaagagggtggacgccaccggg
cccctcatcgccttcctcctggacgggctcctgaagcagtacgtcaagctgtttgtaaag
tccgcggggtgtcagaagaacctgtgcccctacacagttttgcaaaactctatggtcatg
accaacagcctgcacatgtgcttcgccacaggcaactggacagtcaagaggctcggcccc
ccttcttatgtgagggtcggtgtgtctcaggtcctctcgaacaacaactacggagccagg
gtgagccacctcaggcgcatcatgcacgccgtgagcttcaggggtaaaaacatcaggatg
aggcagctccactcttctcactacgggttcctgtgtccctacgagacgcccgagggagaa
aaggtgggtatagtactcaacatggccgagggggcggggttctccctggagacacccagg
gaggttgtgctggccaccgtcaggctgggaaagggcctgccgggcttctttgagggcgct
cccgccaggctggcgtggtccggcgctgcggggtccgcgtccgtggacgtggacggggtc
ctgtgcggcgtgacgggtgaccccgtggggttcgtgagggaggccaggctctgtctcccc
ggtgtgagcgtagtgtggaaaaaggtggagagggagatacacctccttgggtgccaggga
aggttcgtgaggagggtactggacccagaggggatcagggggtccggatacgacagtcct
ccggcccccgaggagagggatatagagatggaccccgctccctcctcgtccccgtcggac
tctctcccttgccctccaggagtctatgtgtgcgcccaggagctgtctgtgtgctctctt
ggggacggagagtacgccgaccctcccgcctctgagatactgactgacgccatgtcttcg
gtcatacccttttacgatcacacccagagccccaggaacgcctaccagtccaacatgggg
aagcaggccataggcttccccgccgtaaactgctcagacaggtacgacgccaccctgcac
aggctggactacccccaaaagagcctggtggactctaggtccgtaaagaggctgggtttt
gacgagatggcccacggggccctgccggtggtggccatcatgacggcgggaggcttcaac
caagaggacagcgtggtcctcaacgcctcctcgttggacaggggcctcttttcctgcgtc
acctacaggaccgtgtcctgcgccgacaagaggaggacaaagtacgacagcgaggtggtg
tgcctccccgactggggcctgaggaacagagagtgggactacgacctgctgggagacgac
ggggtgatagacccgtcgtgcgcgggggccatcgccaggagggtagagggaaagagaaag
gcggccaagaggcccgcgggccagaggacgggaggaggtcccgcgggactgtgcgacgcc
ctgtggataccggcgggcacggtcctggtggggaaggtgtctcactccctgggaccggga
ggcaaccccgtgaggagggacgcatccctgactgtgaagcagtccgaagagggctacctg
gacagggtgactgtggatgtggactctgatggcaagaagctcgtcaaggtgaggctgagg
acccccaggcacccagagatgggcgacaagtttgcgtcgttcactgcgcaaaaggggaca
tgcggagccgtcctgacccaggaggacatgcccttcgacaaggacggggtggtgcccgac
ctcatcatcaacccccacgcctttccctccaggatgaccgtaaactacctcttgcagatg
tgcttcgggaccgcggcgtgcaagctgggcaagacctacgacgccaccgccttcgaaagg
gaggacgtggtgagggacattgcggaagcggcgaaagaggctggcatagactgctgggac
agtgtcctccactcgggctcgacgggcaggaggctccccacaaagatctttatggcgcct
tgtccctaccagaggctcagacacatggtgtctggaaagatgcatagtaggacccacgga
cccaccgacgctctcaccaggcagcccgtggcgggcaggtccagggaggggggcataaag
atcggggagatggagcagtggtgcaaaatctctcacggggcctcagagtccctgaaagag
tctgtgtacgacatgagcgacaagtacgaggtcccggtgtgcaaagagtgcggcaggatc
tcggaccacttcgagtactgcaggatgtgcgacgcgacggacgtgtctttggtgaagctc
ccctacacgaccaagattctgtttcaggaactgaggtccatcgggatttccatagccttc
aagtga
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