Viruses: 37627539 Help Entry 37627539          CDS       T40000                                  Symbol CA787_gp7 Name (RefSeq) Sena Madureira virus; polymerase   KO K26275   Rhabdoviridae RNA-directed RNA polymerase L [EC:2.7.7.48 3.6.1.- 2.7.7.88 2.1.1.375] Virus 1272957  Sena Madureira virus Taxonomy SSDB OrthologParalogGFITVOGVOG cluster Motif Pfam:  Mononeg_RNA_pol Methyltrans_Mon_2nd Mononeg_mRNAcap Methyltrans_Mon_1st Methyltrans_Mon_3rd Motif Other DBs NCBI-GeneID:  37627539 NCBI-ProteinID:  YP_009362110 RS:  NC_034529 UniProt:  A0A0D3R1A9 LinkDB All DBs Position NC_034529:5004..11300 Genome browser AA seq 2098 aa AA seqDB search MFKPDEFDINETENVYELSDDDLRKCNSKKTDLPSISRYDYNLDSPIIIDKIVSFFDYLH GRKTIQLYNDVEFKKYEIWLKSEKVNVKDIISPKNLSTIYEKMIINDWKVTDDWKSILIQ TLKDQDLTEEIFNSFKLYLFEKQSGVNKTTNLTGNINIMGTKFLFLHKLVILMNNCCCAR GKRLGELFGFYFHNLKNHKIPRCEDHYYRGYHEILEKILITKDFIFFGKTNTIVSRDHIL MFKDIILNRMNTFISNHIYEDYDLNDKLSKWLNAGDKCIINYGNDGYKIIKMIEPICNNI MSEIGNTLIEEFPSFPTFNEFINGEMTTLIREYPISEEFLRLTNSGSLKEVICKFGCYRF FGHPIINYLKGLEDLYELTHKIKNIDEKFIDKLASDMAYMVLEKKFREDKIWYIDELPKG HLLYEFRRDQIWPSAYIINTFGDNWHNLPLTKCFEIPEFIDPSELYSDKAHSLQLNELID HIKNNNKKPIPTRRVLTTLLHTENINWIDFLKKINDEGFDVNDLIIGLRAKERELKEGGR FFALMSWVLRNYFVVTEYLIKLHFIPLFEGLTMADDMNMVITKMIGKTAGQDKESCKKII TVANHLDYMKWNSNQRGESNNKIFRVLGEFLGMPKLIERTHEVFENSFIYFVNRPDLMTV RDGKIVNSTSHKVCWQGQLGGLEGLRQKGWTISSMLMLNRLPKRRNTMIRTLAQGDNQIV LTTYRPRIWTTENDRKTIYEEIKLNNNEIMKEVSKGAVKMGLEIKKEECMQSIGFLNYGK VLIIKGVIYPIISKRIARISSISNDQVPTMANILSTVSSCILSISHFSVNIEPILKMYGF FFPLLRNIWEQYDCILGDTVSDIVPTKSDERREYMIKMMFLDPSLGGVCGMSLNRYLIRS FPDPVTEGLSFWKIVYEHTEDKMIRDLCISFGRPKLADYKHSHFRKLLENPSSLNLPGAM SPVLVLKEQILLEMIEERHNFKNKIVKQSIDFYCEQNENIIRWLSDLHPWYPKFISEFYS ATFIGIVQSHIGMFQNARTIRNVMKGKIAEGFDKIMVNSEIDTIKQSISKTGYKGRDIWR CSTERADQLRREGWGRIIYGVTVVHPSEMYGLTGLGNISCDFCILGEEEFITTIVPKGFP KEMSNRGQYPSYLGSKTSESTSLVNPWEKESKIPLIRRAAHLRVAIGWFTDPQSYVASAI YENLLKLTGEEWKGNQSESFGRTGTSQHRYGCSRQSQGGYCAQNPVLSSHMITTTDTMGE IAKINCDFMYQASMLYCQFLTYERYKNCENHITVHHHIRCKGCIREIEEVEITAAREIVL PDVSDTIKSWLPPNCNFTEVKSLIEVSKIDVDDLKVEVLHVNAGKCVGFLYSQGKFERLK TYDESALFPLSLKGKINPIMFCRGIIIGVVYSCVLFLISRRMLNNKGSVKIMIESLGNYI LKSLSTDKAFISLSLNGEIEFYLSTIPHKIPPSYPSNNNDLGLILESGLKLILTRYLDKI YLDKDIKRQSIIVYPEMNDAESISSYGIGREILNILCKNDPPRKTQMNKIREMKSLMLEI GKSDTCSNWLQEKYKITVISSEVRHALKLHPHKYEKPMESLNWGNEYKGEIDYIPLSGTT KEDHLVINQPPRIRNPLLSSIRTGMLATGSHYKIRTILKHFHLDVRDALCGGDGSGGICA MIMRTYTNSRTIFNSLMDIAGEDLRGCKPSPPSAIVSASKDPTRCVNLYTCWEKPSDLSK DETWSYFLHLKKNHNLSINLMTFDMQVTEEEIQDDIDANFIKYGLPILENTCLVIYKTYI HRLLKPNNFIDKIWPHFENVYLARTNLSSSHTSEIYILMKNIQTININSRVDWGDCQRWI QNSYCYKSCREELDRGRTLIGQDLDVGIPTQLLSDPAQDLVNCFQSLGITNRVSLIIGKT IKSNIKSSQINVCTSACNILIYNVNNPDNTLRYVPSNTDVENIGTLFCGFGLYISLMMND FRLYQVVIWIINTYFWVWYDRGLLSLRSAKYQKTVKLNQRISPIQHICRSLLRMCNKYED KQKKSKDFFYHLFRSDFNEEFIDNKIQFFNSVNNFVRPEYVITLDECKEEISELTYMD NT seq 6297 nt NT seq  +upstreamnt  +downstreamnt atgtttaaaccagatgaatttgacataaatgaaacagaaaatgtatatgaactgtctgat gatgatctcaggaagtgcaacagcaagaaaactgatttaccaagtatatcaagatatgat tacaacttggactctccaatcataattgataaaattgtcagtttcttcgattatcttcat ggcaggaaaactattcaattatacaatgatgtagaatttaagaaatacgaaatatggttg aagtctgaaaaagtaaatgtcaaggacatcatttctccaaaaaacttaagcacaatatac gaaaagatgatcatcaatgattggaaagtgacagacgattggaaatctatacttatacaa acattaaaagaccaagatctcactgaggagatattcaacagtttcaaattatatcttttc gaaaaacaatcaggtgtgaataaaacgacgaatcttacaggtaacatcaatataatggga acaaaattcttattcttacataaattggtgattttgatgaataattgctgttgtgcaaga gggaagagattaggtgaactctttggattttatttccacaatttaaagaatcataaaatc cctagatgtgaagaccactattataggggttatcatgaaatactagaaaaaatcttgatc acaaaagatttcatattttttggaaaaactaatactattgttagtagggatcacatttta atgtttaaagatataatattgaatagaatgaacacattcattagtaatcacatttacgag gattatgacttaaatgataaattgtcaaaatggttgaatgccggggataagtgtattatc aattatggaaatgacggatacaagattataaaaatgatagaacctatctgcaacaacata atgagtgaaatcgggaatacattaattgaagaatttccatctttcccgacttttaatgag tttataaatggagaaatgactacacttataagggaatatccaatctctgaagaattccta cgcttaacaaactcaggttctctcaaagaagtaatatgcaaatttggctgttatagattc ttcggtcatccaataataaattacttaaaaggtttagaagatttgtatgagttaacacac aaaatcaagaatattgatgagaagtttattgataaattagcaagtgacatggcatatatg gtgttagagaaaaaatttagagaagacaaaatatggtacatagatgaactacctaaagga catcttctttatgagtttagaagagatcaaatatggccctcagcatacataattaacacc ttcggggataattggcataacttacctttgacaaaatgttttgagattcctgaatttata gatccatcagaactatattctgacaaagcacattcacttcaattaaatgaattaattgat cacatcaaaaacaacaacaaaaaaccaataccaacaagaagggttcttacaactttactg cacaccgagaatataaactggatagactttttaaagaaaataaatgatgaaggatttgat gtaaatgatttaataatcggtttgagagcaaaagaaagagaattaaaagaaggtggaagg ttctttgcgttaatgtcttgggtattaagaaattattttgtggtaactgaatatttaata aaattacattttattcctctctttgaaggtttaactatggctgatgatatgaatatggtt attactaaaatgatagggaaaactgccggacaagataaagagtcgtgtaaaaagataatc actgttgccaaccatttagattatatgaaatggaacagtaatcagagaggagaatcaaac aataagatattcagagtactcggtgaatttttaggaatgccaaagctgatcgagaggaca catgaagtgtttgaaaattcctttatttactttgtaaatagacctgacttgatgactgtg agagatggaaagatagtcaattccacgtcccacaaggtgtgttggcaaggtcaattagga ggattagaaggtctaaggcaaaaaggatggacaatatcatctatgttaatgcttaataga cttccaaaaagaagaaatactatgatcagaacacttgcacaaggagataaccaaattgtt cttactacatatcgccccagaatttggactacagagaatgacagaaaaactatatacgaa gaaattaaacttaataataatgaaattatgaaagaggtatctaaaggtgctgtaaaaatg ggattagaaatcaaaaaagaagaatgtatgcaaagtataggttttttaaattatggaaaa gtactgatcattaaaggagtgatatatcccattatctctaaaagaatagcaagaataagt tcaattagtaatgatcaagttcccacaatggcaaatatcctttcaactgttagttcttgt atattatccattagtcatttcagtgtgaacattgaacctatactcaaaatgtatggtttt ttcttccccctccttagaaacatatgggaacaatatgattgtattttaggagatacagtt tctgatattgtccctacaaaatcagatgagagaagagaatatatgattaaaatgatgttt ctggatccatctttgggcggtgtatgtggaatgtcattaaatcgttatttaataagaagt ttccctgatcccgttacagaaggattatctttttggaaaatcgtatatgaacatactgaa gataaaatgattcgtgatctgtgtatttcttttggaagaccaaagttagctgattataaa cattctcacttcagaaagttattagaaaatccaagttcacttaatttaccaggtgcaatg tctccggttttagttctgaaagagcaaatattgttggaaatgatagaagaacgacataac ttcaaaaacaaaatagttaaacagagtatagacttttactgtgaacaaaatgaaaatatt attagatggttaagtgaccttcacccttggtatccaaaatttatatctgaattttattct gctacgtttattggaattgttcaatcacatatcgggatgtttcaaaatgcaagaaccatt agaaatgtcatgaaggggaaaattgctgaaggatttgacaaaatcatggtcaattctgaa attgacaccattaagcagagtatttcaaaaacaggatataaaggacgagacatctggcga tgtagtactgaaagggctgatcaattaagaagagagggatgggggagaataatatacggg gtcacagtcgtacacccatcagagatgtatggattaactggattaggaaacataagttgt gatttttgtatattgggagaagaagaatttataactaccattgtgccaaaaggtttccct aaagaaatgagtaatcgaggacaatatcctagttatttaggatccaaaacatcagaaagt acttcattagttaatccttgggaaaaagaatctaaaataccattaataagaagagcagct catctcagagtggcaataggttggttcactgatcctcaatcatatgtagcaagtgccatt tacgagaacttacttaagcttacaggtgaggaatggaagggaaaccaaagcgaatcattt ggtcggactggtacttctcaacatcgttatggatgtagtagacaaagtcaagggggatat tgtgctcaaaaccccgttctatccagtcatatgatcactactactgataccatgggagaa atagctaaaataaactgtgactttatgtaccaggcatctatgttatattgtcaattttta acatatgaaaggtacaaaaattgtgaaaatcatataactgtgcatcaccatataagatgc aagggttgcattagagagatcgaggaagtagagattactgctgcaagagagattgtgctt cctgatgtatcagacacaattaaatcttggctacccccaaattgcaattttactgaagtt aaatcccttatagaagtaagtaagatagatgttgatgacttaaaagtagaggttctacat gtcaatgcaggaaaatgtgtaggttttctttatagccaaggcaaatttgaaagattaaag acatatgatgaaagtgctttattccctctgtcactaaaaggcaagataaatccaattatg ttttgtagggggataataataggtgtggtatattcttgtgtattattcttaatatccaga aggatgttaaacaacaaaggaagtgttaaaattatgatagaatctttaggcaattatata ctaaaatctttgtctacagacaaagcttttatttcactgagtctcaatggtgaaattgaa ttttatctctctacaattccacataaaattcctcccagttatccatcaaataacaatgat ttaggtcttatcttggaatctggtttgaaactgatattgactagatatttagacaaaata tatctggataaagatattaagagacaaagtattattgtatatccagagatgaatgatgca gaatctatcagttcctacggaataggtagagaaattcttaacatattatgcaagaatgat cctccaaggaaaactcaaatgaataaaataagagagatgaaaagtttgatgttagaaatt ggaaaaagtgacacatgtagtaattggctacaagaaaaatacaagattacagtgatttct agtgaagtcagacatgcactgaaacttcatcctcataaatatgaaaaacctatggaaagt ctaaattgggggaatgaatataaaggagaaattgattacatcccgttatcaggaactacc aaagaagatcatcttgttataaatcaaccacctcgcattagaaatccccttctatcctca ataagaactggaatgctagcaactggttcccattacaagattcgaactatccttaaacac tttcatcttgatgtcagagacgcattgtgtggaggagatggaagtggaggaatttgtgca atgataatgaggacatatactaacagtagaacaatttttaacagtttaatggacatagca ggagaagatttaagaggttgtaaaccttcccctccatcagcaattgtgagcgcttcgaaa gatccaacaagatgtgttaacttatacacatgctgggaaaaaccttcagacctatcaaaa gatgaaacatggtcatactttttacatctcaagaaaaatcataatttaagtattaatttg atgacttttgacatgcaagttactgaagaagaaatacaagatgacatagatgcaaatttt atcaaatatggccttcctattttagaaaatacgtgtttggttatatacaagacatatatt cacagattacttaaacccaataatttcatagataaaatatggcctcattttgaaaatgtc tatcttgcaagaacaaatctttcctcttctcatacgagtgagatttatatattaatgaaa aatattcagactattaatattaatagtagagtagattggggagattgtcagaggtggatt caaaactcatattgttacaagtcttgcagagaagaattagatcgaggtaggactttgatt ggtcaagatctagatgttggaatccctacacaattactatcagatccagctcaagacctt gtgaattgcttccagagtttaggcataacaaacagagtctctcttatcatcggtaagaca atcaaatcaaatataaagtcatctcaaatcaatgtgtgcactagtgcatgcaatatccta atttataatgtaaataatcctgataatacattaagatatgtacctagcaatacagatgtt gaaaacattgggactttgttttgtggatttggattgtatatatccttgatgatgaatgat ttcagactgtatcaagttgtaatatggataattaacacttatttctgggtttggtatgac aggggattgttatctttaagaagtgcaaagtatcaaaaaacagtgaagttaaaccaaaga atttctcccattcaacacatttgtagatcattgttgagaatgtgtaacaagtatgaagac aaacaaaagaagagtaaagacttcttctaccatctgtttcggtcagatttcaacgaagaa ttcattgataataaaattcaatttttcaattccgttaataattttgtgaggccggaatat gttattacccttgatgaatgtaaagaagagatttctgaacttacatacatggactga

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