Viruses: 37629289
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Entry
37629289 CDS
T40000
Symbol
D1Y26_sLgp1
Name
(RefSeq) Orthotospovirus polygonianuli; viral polymerase
KO
K26280
Tospoviridae RNA-directed RNA polymerase L [EC:
2.7.7.48
3.1.-.-]
Virus
3052582
Orthotospovirus polygonianuli
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Bunya_RdRp
CUE
Motif
Other DBs
NCBI-GeneID:
37629289
NCBI-ProteinID:
YP_009513000
RS:
NC_039204
UniProt:
A0A059U205
LinkDB
All DBs
Position
NC_039204:complement(231..8861)
Genome browser
AA seq
2876 aa
AA seq
DB search
MNLQNVHSFLEITGQITVFLNDLREKLMVLSNVIQKKYKDGSAPISSGLKAIMSMSCTID
EIADMKATYYQSTMSIDQKEMEKKIFIFIDRYKELELMRHDLFGVLASSKLHFAPKHRHD
VVMKDCILSYLEYCSEKEDISNRIEDLDGLTSQLVFQHQTPDNYVIYKETTGEKACLMIY
DWKVSVDTMTENKTSENYYTSIWKTFKDVKVDGEPFLSKFPIFVTIVVLQPMNFMPIVAT
TCRVLEEMRNSPYRTFVDRRNAASRAKLISSRNLKDLAGQDGSKFISFYSECQAFKNLLM
TNIGDYMNRTDEVFFSHWSHEYKETSLKDNLMSRDVVEIINSLANDTIKKELIVNFIFGN
YVFHSKTMSDLHRKDKFEGYKSNCKLLKIKPKKTEEDLKVYLENNEAGFALFESLYSKHM
DKIKTDMLLKKSQEKEIKSIEDSFNINAENYQAEYPGCFTNDLQETKTNFSVCWSPSVEK
ISVKEMNFNNSIVENFRQCFDGEETLIHNKSYGGKFSQGEFSNTLFRLVKACLKDLSCDT
TGQNKIVAEDVVDIKDGSIKISRESKEKSWKEIGDIKTRNGNEFTISERTSKETRSSFFK
GLTLMNINMGKKRKNDHKLELIEKLKQSRVVNEELSLKEGEYDVSSSPEVVNIAVGSVSH
NKKLIRHDNPDVQYWCDSMIQSMYALHGFDTREKDSGKINAVYSEYCNEPEKFFSKGKLI
ESEINISKNLHKVSQSLAVYSYSEDMMQLAKGLMVADRFMRKTDFKILTCANTSMVCLAF
KGDGLNTGKSGVPCITVHKVSELLQPYFASLYTKELVVSFKSGDFYINIMRPQRLNQVRL
LSLFKAPSKVPVCFSQYCLLSTEVKRWISRKDIDLLDCPSNLLPFLKNILFSSVVIGTVT
KLSRMGIFDFMRYAGFLPLSDYSNIKEYIAEKFDPDITNVVDCYFVTGIKNLLLKMEGIN
LSNSIKPLTIDQENDMSGGINDLNIICPITGSTLKTIECLYNNVYLAIYMMPKSLHTHIH
NLTSLLNVPAEWEVKFRTKMGFDLNEEIVPKKEMFNDSGPFSIDGALNVKTLFDYYLKTV
DNVGSTRSNIESKEEFLSTPYKIKTLTSSKKCSKAEIIKNSEIKQCLSNCLGRDPETISG
KDEYVLKGVLKCFVEDKDALRNFMTLEEMDESDYFHFFTRLTTGENKAVMKTSFDKFYYN
SHPTTVETFIKVRYGHVSTTTVLKSKKVSEELYDLIKEYNKIIELDLEALENLGRGLSGS
KMTFMQLLEFVLMRTRTNAGNTDFLVSVFEKMQRTKMDREIYLMSMRIKMMLYFIEHTFK
HIAQSDPSEAISISGDYKIKTLASLSYDTITNYNTSLQKGLECKMAFLSADQSKWSASDL
TYKYILAVLMNPVLTTGEINMMCECILMYVKLKRVCIPTDVFLNLKRGQTTYGSHGTAIS
ALTENLETNTFPVSMNWLQGNLNYLSSVYHSCAMLGFEKALKTNSDFEFTVRWMVHSDDN
ATSVVVKGDMKKFLSKFNCENLSEFLFRSIQSHFKSYCITLNPKKSYASESEVEFISERI
INGAVIPLYCRHLANCCTESSHNSYFDDLMSLSIHITMLLRKGCPNELITFAYSAIQCQA
LSIYSMLPGEENDIIAIGKQVGFPLAKEEIPTCAGGWMRAPVEMLSILGPSSNDQYIYYK
ILIEFFKQKDFTSLKTQVNSLGYVSQRINDLNKRIAKDTLTKEDIKMICMVNLFKTSLIS
EDSDSLSIGMKFQTMMTQIIKLPSYVSEGSLMKNSSFQDFCKLFPNLKKNFDLLDSLKPI
QIDEDGAGNFSDDNSMLSRIQMEELYKHMSKHPEALLIAPMNDKDYILANLYTYSSISKR
NQMSNQSTEKLALDRILRSKAKTFVDPNSKVMMTYRENMSSKLKEIMDKSSNDYKIITTI
SDMMVKDMNFEMIISLMENSVANASIPKANYNFRWFVTEKVPSAIEGSPGLIVMSAIYGM
EYLVELGLKKLPLTENSICILHDIFGNRKTFDDVKKHLTSKETDMKTDEFMLADNLKRTV
LSLNYMIQSQNKLLSLNTCFSRKNFPFYSKYNLGKTFITNTLALWSTIYSRTTNINFYTN
LNFIIDRNSRMIVSLQRDMSLEKLLDCCSYVSDRLQSLFPDMKIEDIRSILSKLNFNSVN
LLQKVTSEMKSVKRAISQIKTASHVTLSYRPQLMAMSRYAAWLYNFGYINEREFKFVIEQ
VRQSEVNYIKTDEQDTRGYYVSGISYKIGIKTLHNYAQLEMTNRDIAIQLNSPYEFIRGE
DNRMWDTHVKSVYKLLQKLLIDKQSVLKTFLNMKVDVMPNEFCIHESSQKTLLIYINETN
RVVTLDRVKFKGKVKYNYSNEFTWSLMENNYNYMLRKAEAGECFSELYKTIDSNSSLMEN
ILANLKSSLIYNSDMENMVQNAVEGIDDEENKDIFINSLNQIYDLAYKGLKECKSSEEFE
TYLRDNEFDDLVNTHKEMLELICQELSDTDTRIQSVVDKLRVWSNSLSNFGDLCVMLKFS
MINDSKGIRTYKATGVDFHSLSASESMICSDYDIFEMLKLIKACEACHTSNSTLNLIAFR
DIKNTRYIPPHKRLYGGVVHFSYPLKLNNDVMSRFYEHKTISLNDIEITESVREILKQNG
FTITGSNVKLEPDMLELNPITVTDEHSTFDSVSRQMRLTKKKSSYLIPANTLLLGELMKF
LMLCIKGNEYDVQKMLSAHFDFSIERDDRIDSLIKCIMTLKSSGYVQKYFSNDKEEEILL
GVATSLENFMILSTPHGKFVEPFDAQKLIKSALAEKDKDMKLKVLLRIRSYISSKLDYLN
EQCIYKNTTNIEISDLVFSSINHIDKEISELRTFDKTVYHDEFNEYLKTAEGTSSD
NT seq
8631 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttcaaaatgtacacagcttcctagaaatcacaggccagattaccgttttcctg
aatgacttaagggaaaaacttatggttctgtccaatgttatacaaaaaaagtataaggat
ggatcagctccaatttcctctggactcaaagcaatcatgagcatgtcttgcactatcgat
gaaatagcagacatgaaggccacttattaccaaagcacgatgtctattgaccagaaagaa
atggaaaagaagatattcatctttatagacagatacaaagaactagagctaatgaggcat
gacctctttggagtcttagctagctctaagctccattttgctccgaaacacagacatgat
gtagtcatgaaagactgcatcttgagctatttggaatactgttcagaaaaggaagacata
agcaacaggatagaagaccttgatggcttaacttcccagttagtcttccaacaccaaacc
cctgacaattatgttatttataaggaaacaacaggggagaaagcatgtctgatgatttat
gactggaaagtttcagttgacactatgacagaaaacaaaacttctgaaaattattacaca
agtatatggaagacatttaaagatgtaaaagttgacggtgagccatttctgtcaaaattc
cccatatttgtcacaatagtagttctgcagcccatgaactttatgccaatagtggccaca
acctgcagagtgctggaagagatgagaaactctccatataggacatttgtagatagaaga
aatgctgcatctagagcgaagctaatttcctctaggaacttaaaagacctggctggccaa
gatgggtcaaaattcatttcattctattcagaatgccaggctttcaagaatctcttaatg
acaaacattggagactacatgaacagaactgatgaagtcttctttagccattggtcacat
gagtacaaagaaacatctctcaaggacaacctaatgagccgagatgttgttgagattata
aactcattagccaatgacactatcaaaaaggagttgatagtgaatttcatttttggaaat
tatgttttccacagcaagacaatgagtgacttgcatagaaaagataaatttgaggggtac
aaatctaactgcaagttgctaaaaatcaagccaaagaagactgaagaagatctgaaagtg
tatctagagaacaatgaagctggctttgctctttttgagagcttatactcaaaacacatg
gacaagataaaaacagacatgctgctgaagaaaagccaagaaaaggagataaaatctatt
gaagattcattcaatataaatgccgaaaattaccaggcagagtatccaggctgcttcaca
aatgacctgcaagaaaccaagacaaacttttcagtttgctggtccccgtctgttgaaaaa
atatctgtcaaagaaatgaacttcaacaacagcattgttgaaaacttcagacagtgtttt
gatggagaagaaactcttatacataataagagttatggtgggaaattcagccaaggggaa
ttctccaacactctttttaggctggttaaagcttgcctaaaagatttaagctgtgacact
acaggtcaaaacaaaattgtggctgaagatgtagtggacattaaagatggaagtatcaag
atatcgagagagagcaaagaaaaaagctggaaagagattggtgatatcaaaacaagaaac
gggaatgagttcacaatcagtgagagaaccagcaaagagaccagatccagctttttcaaa
ggattgactctaatgaatatcaacatgggcaaaaaaagaaaaaatgaccataaactagaa
ctgatagaaaaactgaagcagtctagagtggtcaacgaagagctatcactcaaggagggt
gaatatgatgtctcatcaagcccagaagttgtaaacattgctgtgggctcagtttcccac
aacaaaaagttgataagacacgacaacccggatgtccagtattggtgtgactccatgata
cagagcatgtatgcattgcatgggttcgatacaagagaaaaagactccggaaagatcaat
gcagtttattcagagtactgcaacgagccagagaaattcttctctaagggtaagctcatt
gagtcagaaataaacatctctaaaaatctgcacaaagtatcacagtctcttgctgtttat
tcttacagcgaggacatgatgcagctggcaaaagggctgatggtagctgacaggttcatg
agaaaaactgatttcaagatcttaacctgtgctaacacaagcatggtttgcttagccttc
aagggggatgggctaaacaccgggaaatcaggtgtgccgtgcattacagtacacaaagtc
tctgaactgcttcagccatactttgcatctttatacacaaaagagcttgtggtctccttc
aagtcaggagacttctacattaatataatgagacctcagaggcttaatcaagtcagacta
ctgagcttatttaaagcaccaagcaaggtgccagtttgtttttcccagtactgcctgctc
agcacagaggtgaagagatggatatccaggaaggacattgatctgctagactgcccttcc
aatctgctccctttcctcaaaaacatattattctcatcagtggtcataggcacagtcaca
aagctgagtaggatgggaatatttgatttcatgaggtatgctgggtttcttcctttatca
gattactcaaatataaaagagtatatagcagagaaatttgatcctgatataaccaacgtg
gtggattgttactttgtaacaggaatcaaaaatctgttactgaaaatggaaggcattaac
ctgagtaacagtattaagccattgaccatagaccaggaaaatgacatgtctgggggcata
aatgaccttaatataatatgccctataacagggtctacccttaagactatagagtgccta
tataataatgtatatttggccatatacatgatgccaaaatcccttcacacacacatacac
aatctgacttctctgttgaatgtgcctgctgaatgggaggtcaagttcagaacaaaaatg
ggctttgacctaaatgaagagattgtgccaaaaaaagagatgttcaatgactcaggacca
ttctctatagacggggctctgaatgtcaagacactctttgactattatttgaagactgtg
gataatgtcggatcaaccagatctaacattgaatccaaagaggaatttctctctacccca
tataaaataaaaactttgacctcttctaaaaaatgctcgaaagcagagatcattaagaac
tctgaaatcaagcagtgcttatcaaactgcctaggcagagatcctgaaacaatcagcggg
aaggatgaatatgtcctcaagggagttctgaaatgctttgtagaagacaaagatgctttg
aggaacttcatgaccctagaagaaatggatgaatctgattatttccatttcttcaccaga
ctcacaacaggtgagaacaaagcagtgatgaaaacaagctttgacaaattttactataac
agccacccaacaacagtagagactttcataaaagtcaggtatggtcatgtgtccaccacc
acagtgctaaaatcaaaaaaggtcagtgaagagctttatgatctgattaaagaatataac
aagatcattgagctagacctagaggcattggagaaccttggcagaggtttgtccgggagc
aaaatgaccttcatgcagctgcttgagtttgtgctgatgagaaccaggacaaatgctgga
aacacagacttcttagtttctgtgtttgagaaaatgcagagaactaagatggacagagaa
atatatctcatgagcatgaggatcaaaatgatgttgtatttcattgaacacacgttcaag
cacatagcacaatctgacccttctgaggccatatctatttctggtgattataaaataaaa
acattggcttcgttgtcctatgacacgataaccaactacaacacctcactccagaaaggt
ttggaatgcaaaatggccttcctttctgctgatcagtcaaaatggtctgcttcagatctg
acttataaatacattttggcagtgttgatgaacccagttctgacaacaggggagatcaac
atgatgtgtgagtgcattctgatgtatgtcaagctgaagagggtctgcatacccacagat
gtttttttgaacctcaaaagagggcaaaccacatatggctcccatgggactgccatatct
gcactgacagaaaatctggaaacaaacacctttccagtatccatgaactggctacaagga
aatctgaattacttgtcctcagtttaccattcttgtgccatgcttgggtttgagaaggca
ctgaagactaacagtgattttgaattcactgtaaggtggatggttcattcagatgacaat
gccacctctgtcgttgtaaagggtgacatgaagaaattcttgtccaagttcaattgtgag
aacttgtctgaatttcttttcagaagcattcagtcacactttaaaagctattgtataacc
ctgaatcccaagaagagttatgcatcagaatctgaagtggaattcatctcagaacgaatc
ataaatggtgctgtcataccactatactgcagacaccttgcaaactgctgcactgaatca
tctcacaacagctactttgatgatctgatgtcgctatccatacacatcaccatgcttctg
cgcaagggttgccccaatgagcttataacatttgcttattcagccatacagtgccaagct
ctaagcatatactctatgctgcctggggaagagaacgacatcattgctatagggaaacaa
gtggggttccctcttgcaaaggaagagataccaacatgtgctggaggctggatgagagca
cctgtggagatgctctctatattagggccatcatcaaatgaccagtacatctattacaaa
atcttgatagagttcttcaaacaaaaagattttacttcccttaaaactcaagttaatagt
ttggggtatgtgtctcaaagaataaatgatctaaacaaaagaatagctaaggacacgctt
accaaggaagatatcaagatgatatgcatggtaaatctgtttaaaaccagcttgatatca
gaggatagcgacagcctcagcataggaatgaaattccagaccatgatgactcaaataatt
aagctgccgagctatgtcagtgagggttctctgatgaagaactctagtttccaggatttt
tgcaagctatttccaaacctgaaaaagaactttgacctgttggattctttgaaaccaatc
cagatcgatgaggatggagctggtaatttctctgatgataactccatgctctcaaggatc
caaatggaagagctgtacaagcatatgtctaagcatcctgaagctctcctgatagctcct
atgaacgacaaagattatatacttgctaatctttacacgtatagcagcatcagcaagagg
aatcagatgtccaatcaatcaactgagaaactggcattggacaggatattgagatccaaa
gctaagacctttgttgatcccaattcaaaagtcatgatgacatatagagagaatatgtca
tcaaagctaaaagagatcatggacaaatcatccaatgactataaaattatcaccaccatc
tctgacatgatggtcaaggatatgaactttgagatgatcatatccctcatggagaattct
gttgccaatgcttccattccaaaggccaattacaatttcaggtggtttgtcaccgaaaaa
gtgcctagtgcgatagaagggtcccctggtctgatcgtgatgtctgctatttatgggatg
gaatatcttgtggagctagggctgaagaaattgcctttgacagagaactccatctgcata
ctccatgatatatttggcaataggaagacatttgatgatgtcaaaaaacatttgacatct
aaagaaacagacatgaaaacagatgaattcatgttggctgacaatctgaaaaggacagtt
ctttctttgaactacatgatccaatctcagaacaagctgttgtccttaaacacctgcttt
tctaggaagaatttccctttctactccaagtacaatttagggaaaacatttataacaaac
accctggctctgtggagtacaatctacagtaggaccaccaacatcaacttttacacaaac
ttgaacttcatcattgatagaaattcaagaatgattgtctctttgcagagagacatgagc
ctggagaaattgctggattgctgctcatatgtctctgacagactgcagagcttgtttcca
gatatgaaaatagaagacatcaggagcatcttgtcaaaactgaacttcaattctgtaaac
cttctccaaaaagtgacttctgaaatgaagtctgtaaaaagggccatatctcaaataaaa
acagcaagccatgtcactttgtcatacaggccacagctcatggccatgagcaggtatgca
gcatggctatataactttggctacatcaatgaaagagagttcaaatttgtaatagaacag
gtcaggcaaagtgaagtaaactatattaagacagacgagcaagataccagaggatattat
gtctctgggatatcctacaaaataggtatcaaaacgctgcataactatgctcagctggag
atgacaaacagagatatagcaatccagctgaattcaccttatgaattcattagaggggaa
gacaacagaatgtgggatacccatgttaagtctgtttacaagcttttgcaaaaactgctt
attgacaaacagagcgtcctgaagacctttttaaacatgaaggttgatgtgatgcctaat
gaattctgtatacatgaaagttcccagaagaccttgttaatatacataaatgaaaccaac
agagtggttactctagacagagtaaaattcaagggaaaggtaaagtacaactactccaat
gagttcacatggtctctcatggagaacaattataattatatgttgagaaaagcagaagca
ggagagtgcttttcagagctgtacaaaacaatagacagcaatagcagcctgatggagaac
atactggcaaatctcaagtctagtctgatttacaactcagacatggagaacatggtgcaa
aatgctgttgagggcatagatgatgaagaaaataaagatatcttcattaattctcttaac
cagatatatgatcttgcctacaaaggcctgaaagaatgcaaatcgtcagaagagtttgaa
acatacttgagagacaatgaatttgatgatttagtcaacacacataaagagatgctggaa
ctgatctgccaagagctttcagatacagataccagaatccaatctgttgttgacaaattg
agagtgtggtcaaacagtttgtccaactttggagatctgtgtgtaatgctcaaattctcc
atgataaatgattccaagggaataaggacatacaaggccactggtgtggacttccactct
ctctctgctagcgaatccatgatatgttcagattatgacatctttgaaatgctgaagctt
attaaagcttgtgaagcttgccacacaagcaattctaccttaaatttaatagccttccga
gacataaaaaacactagatatatacctcctcataagagattatatggaggagttgtccac
ttttcttaccctctgaagttgaacaacgatgttatgtctaggttttatgagcacaagaca
atatctctcaatgacatagagataacagaatcagtgagagaaatcttaaagcagaatggg
ttcacaatcactggttcgaatgtcaagttggaacctgacatgctggaactcaatcctatt
acagtgactgatgagcacagcacttttgacagtgtttccaggcaaatgaggctcaccaag
aaaaagagctcatatttgataccagcaaacacccttcttcttggagagctcatgaaattc
ttgatgctgtgcatcaaaggtaatgagtatgatgttcaaaaaatgctcagtgcccatttt
gatttctctattgaaagagatgataggatagacagcttgataaaatgcataatgacatta
aaatcaagtgggtatgtgcagaaatatttctccaatgataaagaggaagaaatattgctt
ggggtggccacaagcttagaaaatttcatgatattgtcgacccctcatgggaaatttgta
gagccttttgatgctcaaaagctgataaaatctgctcttgcagagaaagataaagatatg
aagctcaaagttcttctaaggataagatcatacatttcatccaaactggattacctaaac
gagcaatgtatatacaaaaacacaactaacatagagataagtgacctggtattcagctcg
attaatcatatagataaagaaatatctgaactaagaactttcgacaaaacagtctatcat
gatgaattcaatgaatatttaaagactgcagaaggaacaagttctgattga
DBGET
integrated database retrieval system
