Viruses: 3844362
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Entry
3844362 CDS
T40000
Symbol
L, LNYV_gp6
Name
(RefSeq) Lettuce necrotic yellows virus; RNA-dependent RNA polymerase
KO
K26704
Rhabdoviridae RNA-directed RNA polymerase
Virus
32612
Lettuce necrotic yellows virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Mononeg_RNA_pol
Mononeg_mRNAcap
Motif
Other DBs
NCBI-GeneID:
3844362
NCBI-ProteinID:
YP_425092
RS:
NC_007642
UniProt:
Q4W382
LinkDB
All DBs
Position
NC_007642:6357..12563
Genome browser
AA seq
2068 aa
AA seq
DB search
MDLWNEETTPKKNAYDSLPDYHLQNPLYAITDQLSMLKRGKRLNYRLTSSYKLMKSQSTD
IKEGDPILLKEWARNWFSETELYVVDQTLSDCENRLSLDETDDLHFDTHLLRESVRMWRC
EFPHDDWVRMRGMQNLLIVMNAISSRRPPPPRHTCIIPGLSKITVEGGVVLVTSSLLGFQ
PEGDKETTVFAADWVRAVSDVYTERFLVLSGAILGRCLSDEHYPQVLDLEFIINWGDTVL
RRKGNKGFKLLKAYEALVLGVVQGKSESDFIDPDRFLRNTLNDIIDDDKDLGAYAVLLIQ
RLQQIDSAHHLIQLFGLHRIWGHPLVDPAKGMEKMIIIGQKDIVRETSRPEVMGVHFKKL
MAQGYREKHGVYPNVKGNGELETLIKNNHDWKEVGSLDNDNHWRLLRFDKTFSIPESFNL
SMIVADKSVSPTLSELKENILRKKTVMNQELRRGVLRWINHDSIDPREFLEQVNDKKFPD
DHKIIGLRSKEREMNPTPRMFALMSHLMRVYVVITESMLSEHILPYFPQITMTDSQLDLT
KKTYSTVKNQAAKIRRSGALYDTKTVCMSLDFEKWNGHMRKESTFHVFEALGDLFGMENL
YNETYDIFKDSYFYLADGSYVPSMDAQGNFTPEPPYSFTGHKGGQEGLRQKGWTIFTVVC
LDWICRKHNCTYKIMGMGDNQVLQLTMYTYRVDASGKATERGREDMRRVLFGLFDDLLDV
FSDLGLPLKPLETWISEDLFVYGKYPVLKGVPLSMDLKKIMRIFPFSNQETMTIENALNT
IAGNAQAATQAAPFLGVSYLVGIFMISLCSHDMLVYHPLIAKGLREVLRENRTWGLKFKG
AHQVKTDIKGEMVDETNLRRLMMNVPRILGGYVSFNLYGLMMRGFPDPVSLAYSQLFSWG
VPTGGSDQRDYMLRWLKPIFMPERSMRLLVEDVSSVNLLAPVTPTAGLRRVVEQYLTDGR
VIKNAEFRDLMMSRDNELEDVISEHLCSGEHLHIRLIHDIMESTIFGYVKSITSKVTKSS
TIVSLAIGKAKGDPLTRLMSDEENYFRFFMWRSVINPHYDIPACPTDLAKQVRRIGWGKE
LIGVTVAYPWSFLKKTDCYESGCLCTCDDGFISLFLPDSPVTPQEWDRSIGKNPPYLGSM
TKEKVVISTGSKVYSGEPLVRRPINLMRVIGWFVPEESETAKIIMSCVSAVSDVNPLIFK
GMTEGTSGSEIHRFRDTSLKHGALCSSNYLYSTRYHVSTDTFTRYAKGAQNYDMLFQANL
CAIVETTHQYVLKTNQSKEPQRKTHHYKQTCYSCINPLDESFYDVKSSKLSQLIPSKKTN
KYLYVPEAKISMTLEHVPAKSWEFGTLSSDGFDQLSVNLRLQWLTDAVADNVVIDILNPA
GEESYTTTSLMDIKEHNRLFYLTIRPRDFYDQLCNRILILAEWRCMSLSDWKTPTTEAIS
RAAEAIIGDTPISRWYGVTGFFSWPSSMERYYVYPEIQEPDSIPVTALSACRSVRNSLLG
LLGSSRKFRGRNTRIFSEDAKASKLSLKLMVYDWVKKKKKCRACHREIGIMSAHQLSSTL
PNSIICPKGHYVTQGLKDLDIMRSRVTLDSLRKCCSSDEIPTEPMEKKITEWAPLTSTTC
RTLFDSSSMRSELIPYSPTGIESSINVQPIPKSDLYKLISLPTNAMYKYMEVISRNIEGI
MNCKTAFVTGNGLGGTSKVLSNMWPGRIITSTLLDTGDAIPQVYPNCDKGSSSYARGTVI
SDLMVTRVNDVNHLLWGEDWKPVFQSYETDLCISDIEINGELNGESRQTMIATVTMAHDW
KMVIMKDYIYNMREMENRLSILLPVFKSLELITCNSRQRVMPEVWWIMKARRSSGKLLGY
HRSVIRQIWDGVKEGINTADWAMESVFSEINRTIASTADMIAMTIRLKAFFSLPIVGSVL
PYKGSYTRLLGYLQRGKKPEDISLITSDDGKRLYLSDYEKVRSVLFGLAVGMCSSATERD
RMLDESEYWAIDWIPSGPHIWLPYLFKGVERSTLIHVYDYIPMLTLIMKRERLLFKSSSD
IIEFKYTNNRDSCCFPITKTAKIKFNIK
NT seq
6207 nt
NT seq
+upstream
nt +downstream
nt
atggacctatggaatgaagaaacaacgcccaagaagaacgcatatgactctcttccagac
tatcatctccaaaaccccctatatgctataaccgatcagttatcaatgttgaagagagga
aagcgcttgaattataggttgacttcgtcatacaaactaatgaaatcccaaagcaccgat
ataaaagaaggagatccaatcttgctgaaagagtgggcgaggaactggttttcagagaca
gagctttacgtggttgaccagaccctatccgactgtgagaaccgattgtcactggacgaa
actgatgacttgcactttgatacccacttattgagagaatctgtcagaatgtggagatgt
gaattccctcatgatgattgggttagaatgcgagggatgcagaacttgctaatagtgatg
aacgctatctcaagcagaagaccaccaccccctaggcacacttgcattatacctgggtta
tcaaagatcactgtggagggaggtgtagttttagtgacaagctcattgttagggtttcaa
ccagagggagataaagagacaactgtattcgctgctgattgggtaagggctgtatctgat
gtttacacagagagattcttagtgctgtctggggctatcttgggaagatgtctctctgat
gaacactacccccaagtgttggacctggaattcatcatcaattggggagatacagtactg
agaagaaaagggaacaaaggatttaaattgttgaaagcatatgaggccctggttttgggt
gttgttcaaggaaagagtgaatcagactttatagatccggataggtttctaaggaacaca
ttaaatgatataattgatgatgataaagacctgggagcctatgctgtgctattgattcag
agactacaacagattgattccgcacaccatttgattcagttattcggcctacacaggatc
tggggtcatccgctggtggatccggcaaaaggcatggaaaagatgataataataggtcag
aaagatattgtcagggaaacctcaagaccagaggttatgggcgttcatttcaaaaaattg
atggctcagggatacagggagaagcatggtgtttatccaaatgtcaaaggtaatggagaa
ctagagaccttgataaagaataatcatgactggaaagaggtcggatctctagataatgac
aatcattggaggttgttgagatttgacaaaactttctcaatcccagaatccttcaatctc
tctatgatagtggcagacaagagcgtatcccctactctatctgaactcaaagaaaacata
ttaaggaaaaaaaccgtgatgaatcaagaattgaggcgtggggtgctccgttggattaat
catgattctatcgatccccgagagttcttagagcaagtcaacgacaaaaagttccctgat
gatcacaaaattatcggattgaggtcgaaagagcgagaaatgaacccaacccctagaatg
tttgccctcatgtcacatttgatgagggtttatgttgtcataacagaatctatgctgtca
gaacacatcttgccatatttccctcaaataacgatgacagactcccaattggacttaacg
aagaaaacttacagcacggtcaaaaatcaggcagcaaaaatcagaagatcaggggctctg
tacgacaccaaaacagtatgcatgtctctggattttgagaaatggaatggtcatatgaga
aaagagtccacatttcatgtgttcgaggctctaggagatttgtttgggatggagaacttg
tacaacgagacttatgacatcttcaaagacagttacttttacctggctgatggatcatat
gttccttctatggacgctcaagggaacttcacacccgagcccccgtattcattcacagga
cataagggggggcaagaaggactgagacaaaaaggctggaccattttcacggttgtgtgc
ttggactggatatgtaggaaacataactgcacttataagattatgggtatgggagataat
caagtcctccagttaacaatgtacacctatagggtagatgcatcaggaaaagcaacagag
agagggagagaagatatgcggagagtgttgtttgggttgttcgacgatttgttggatgtg
ttctctgatctgggactacccctgaaaccgctagagacatggatatcagaagacttattt
gtttatgggaagtatccagtgttgaaaggagtgcccctcagtatggacttgaagaagata
atgaggatatttccgttttccaatcaggagacgatgacaatagagaatgcactcaacacc
atagccgggaatgctcaagctgcaacacaagctgcaccatttttaggagtatcatatttg
gtagggattttcatgatatctctgtgttctcatgatatgctagtttatcatcctctgatc
gcaaaggggctgagggaagtgttgagggaaaacaggacttggggattgaagttcaaggga
gcacatcaagtcaaaactgatatcaaaggggaaatggtcgacgaaacaaaccttagaaga
ttgatgatgaatgtccctcgcattttgggagggtatgtcagctttaacttgtatggactc
atgatgagaggctttccagatcctgtgtccttagcatatagccagttgttctcgtggggt
gttccaaccggaggttcggatcagagggattacatgctgagatggttaaagcctatcttt
atgccggaaagatcaatgagattgcttgtggaagacgtatctagcgtgaatttgttagcc
ccagtgaccccaactgctgggctccgaagagtagtagagcaatatttgactgatgggagg
gtgatcaaaaatgctgaattccgagatcttatgatgagtagggacaacgagttagaagac
gtgatctcagaacatttatgctcaggggagcatctacacatcagattaattcatgacata
atggaatccaccatttttggatatgtcaagagcatcacgagcaaagtgacgaaatcatca
acaatcgtaagtttggcgataggaaaagctaaaggtgaccctctaacaaggttgatgagt
gatgaagagaattactttagattctttatgtggcgatccgtcatcaatccgcattatgat
atccctgcttgtcctaccgacctagcaaagcaagtgaggaggatagggtgggggaaagag
ctgatcggtgttacagtggcatatccctggtcgtttcttaaaaagactgactgttacgag
agcggatgtttatgtacatgtgatgatggcttcatttcattattcttgccagactctcca
gtgacgccccaagagtgggatagatctatagggaagaatcctccctacttgggaagtatg
actaaagagaaagtcgtgatatcaactggatcaaaggtgtactcaggggaaccattggtg
agacgaccaataaatttgatgagggtaatagggtggtttgtcccagaggaaagcgagact
gcaaagatcattatgtcatgtgtatctgctgtgagtgatgtcaatcctctaatatttaag
ggcatgacagaagggactagtgggtcagagattcatcgattccgagatacaagcttgaaa
catggggccctttgttcttccaattatctgtattctacccgatatcatgtttcaacagac
acattcacacgatatgccaaaggagcccagaattatgacatgttatttcaagccaacctc
tgtgccatagttgagaccacacaccagtatgtactgaagactaatcagagcaaggagcct
caaaggaagacccatcactacaaacagacgtgttattcttgtataaatccattggatgag
agtttctatgatgtcaagagcagcaaattgagtcagctgataccgagcaaaaaaacaaac
aaatatctttatgtccctgaagcaaagatatccatgacccttgaacatgtcccagccaaa
tcatgggaattcggaaccttatccagtgatgggtttgatcagctctcagtaaatctgcgg
cttcaatggttaacagacgcagtggcggataatgtggtgatagatatattgaacccagcg
ggagaagaatcgtatactacaacctcattgatggacatcaaagagcacaacagactgttc
tacctaacaataagacccagggatttttacgaccaattgtgcaacaggattcttatattg
gcagaatggagatgcatgagcttatctgattggaagacaccaaccacggaagctatatca
agagccgcagaagcaataataggagatacacctatatcaagatggtatggggtaactggg
ttcttctcctggccctcttctatggagagatattacgtttatccggagattcaagaacct
gactcaatcccagttacagccttgtccgcttgccgctctgttagaaacagccttctgggt
ctccttggaagttcgaggaagtttagagggagaaacacacgaatattctcagaagacgcc
aaagcctctaaattatctctcaaattgatggtttatgattgggtaaagaagaagaagaag
tgtcgagcatgtcatcgagagatagggatcatgtctgctcatcagttatcatcaacactc
cctaactccataatttgtcccaagggtcattatgtgacacaaggacttaaagatttagat
atcatgcgtagcagagtgacactcgacagtctcagaaaatgttgcagctctgatgagatt
cccacggaaccaatggagaagaagataacggagtgggcgcctcttacatcaacaacatgc
agaacactctttgattcatcctcgatgaggtctgagctcataccctacagtccgacaggc
atagagtcttcaataaacgttcagcctataccgaaatcagatttgtacaaattgatatct
ttgcctactaatgctatgtacaaatacatggaggtgatttccagaaatatagagggcatc
atgaactgtaaaactgcatttgtgacaggaaatgggttaggaggaacaagcaaggtgttg
agcaacatgtggcctgggcggatcataacatctacgttactggatactggtgatgccata
ccgcaagtgtatcctaattgtgataagggctcatcatcttatgcaagaggaactgtgatc
tctgatttgatggttactagagtgaatgatgtcaatcacttattgtggggagaggactgg
aagcctgtatttcaatcttatgaaacagatctttgtatctctgacattgaaataaatggg
gagcttaatggtgaaagcaggcaaactatgatagctacggtaacgatggcacatgattgg
aagatggtcatcatgaaagattatatttacaacatgagagagatggagaatcgactgagt
atattgttgcccgtttttaagagtttagagctgataacatgcaactcaagacagagagtg
atgccagaggtttggtggatcatgaaagccagacggtcctccggcaaattgttgggctat
cacaggagtgttatcaggcagatatgggatggggtcaaggaggggataaatacagcggat
tgggcaatggaatctgtattctctgaaatcaacaggacaatagcatcgacagcagacatg
atagccatgacaataagactaaaagctttcttttctctgcctattgtggggtctgttctg
ccatataaaggatcgtatacaagactgttaggataccttcaaagaggaaagaaacctgag
gacatatcgctgataacgtcggatgatgggaagcggctatatctatccgattatgagaag
gttaggagtgtcctttttgggctagctgtgggaatgtgttcttcagccactgagagggac
aggatgctagatgaatctgagtattgggctatcgattggatcccgtcaggtcctcatata
tggttgccttatctgttcaaaggagtggaacgatcaacattgatccatgtttatgactat
atacctatgttaaccttgataatgaaaagagagagattgctattcaaaagttcttcagat
ataatagagtttaagtatacaaataacagagatagttgctgtttccctataacaaagact
gctaaaatcaaatttaatattaaataa
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integrated database retrieval system
