Viruses: 3882097
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Entry
3882097 CDS
T40000
Symbol
ORF1, AltMV_gp1
Name
(RefSeq) Potexvirus alternantherae; replicase
KO
K26615
Alphaflexiviridae RNA-directed RNA polymerase
Virus
85454
Potexvirus alternantherae
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Vmethyltransf
Viral_helicase1
RdRP_2
2OG-FeII_Oxy
2OG-FeII_Oxy_2
UvrD_C_2
AAA_14
Motif
Other DBs
NCBI-GeneID:
3882097
NCBI-ProteinID:
YP_459944
RS:
NC_007731
UniProt:
Q2TJB1
LinkDB
All DBs
Position
NC_007731:95..4720
Genome browser
AA seq
1541 aa
AA seq
DB search
MAHFRSVLDQMNDPSLRAVIQEEAYREIKKTIAETKQYNPYAQDPAAADSLEKLGIESNP
FSVRAHTHAAAKSIELDMYKITGYSLPKENPITFLFMKRSKLQYFHRGPQHGDLFLNAWI
EPKDVTRYDLEDLFKPSITPEIQTRVAFIGDTLHFLPLGAIREIFTNSQKLHTLYATMVL
PPEAMHRMHSIHPSIYELEFHERNFIYKPGGHAGASYCHEYSQLQWLKVGKFEWCDKKYQ
KHYVTSQILETKGANHLFVFQRGNFATPTYRTFGVETKFVTLPPIFLPKKYNARYPIKKT
VAQQLFLYIKSVKTVTERDIWAKVRQIIKTAELQSYSAKELALIVNYYLLISKLDSVTCF
DNVLTGGALKKLFKPIVAWWSTFKGKIFGKEEFEQLMEALEWVDVSLSYRVETYSQANPN
NQPKVMFGYEWLSTETGTPGTEEDVAPETPQEDEDPHEKYIQALQILTKALDQESAPPPT
EPAQSSSINDPQQEEHLRSSHDLHTDESPSCSGSLSSYACHCPCGTELKIFSAEFPPIPP
LSHGDRLKNREAFFFSRDGTPYSYTGGSHVSRGWPAFLDQILATAELVRPLPHFNQCLIQ
KYQRGASIPFHSDNEPCYDVDHQVLTINLTGEAEFKTSCKAGSGSCTLVENQFHLSPPGF
QKTHKHSVVSLSAGRVSLTFRSTVKQGVTSEEGDYVEPDNLPWKAWLEKLRNLGFRGTQL
QYDPNGALISPIESIKSLPKCSPEKVNPSLLKMLNSQARAPTPFSPSPIRAKAYSSDVKN
SRIGALLRQQGKDWGHRFDSLVENGQRQLAISVIHGAGGSGKSRALQMYLKDNPDADVTI
VLPTNELRLDWLKKLPTFPADQIKTFEKALLAPTKPTVIFDDYGKLPAGYIEAFSFYMSS
AELLVLTGDSKQSVHHESNENAMSSLIEPFTLEADKYSRYYINATHRNKRDLANKLGVYS
EVTGITSITQGNHPVPGLHLLVPSLYKKQAFSEMGHKASTYAGCQGLTAPRVQILLSEET
SMCSREVIYTALSRAVHSIHFVNCGPNNQAFWAKLESTPYLKAFLSTLREDAAPVVKPKE
EAPAPVDPPKTHIPVDSAMPIYEDLLDQMPEKHEREIFSEKHGHSNCVQTEDTFVQMFSH
QQAKDETLLWATIEARLVISNPKANWQEFMEKKPIGDVLFGFYREAMGLPTEPIAFEPQL
WESCIHEIQRTYLAKPINMLKNGQARQSPDYDPNMISLFLKSQWVKKMEKLGALKIKPGQ
TIASFHQATVMLFGTMARYMRRMREIFQPKNIAINCEMTPEDLTDWAVGPAGQWKFAGPS
LANDFTAFDQSQDGAMLQFEVLKAKHHSIPEDVLDAYLHIKTNSKIFLGTLAIMRLTGEG
PTFDANTECNIAFTHAKFQIPKGTAQLYAGDDSAIDGNPTVRESFRLVEQKLKLRSKPAI
AMQEKGDWAEFCGYRITPKGFIKDPKKLHASLVLEKKKGNLRNVLRSYELDLALAYQHRD
ELHELLSEEELRLHYDTVRTLVKSGGGEVLKTFLPKDESLY
NT seq
4626 nt
NT seq
+upstream
nt +downstream
nt
atggcccactttcgttccgttcttgaccaaatgaatgatcccagccttcgggcggtcatt
caagaagaagcttaccgcgaaattaaaaaaactatcgcggaaactaaacagtacaatcct
tacgcccaggatccagcggcggctgactcattagagaaattaggaatagaatctaacccc
ttctcagtccgcgcccatacacacgcggccgcgaagtctatagaattagacatgtacaaa
atcacgggttactccctcccaaaggagaatccaatcacttttcttttcatgaagaggtcc
aaacttcaatacttccacagaggcccacagcatggagacttgttcctcaacgcttggatt
gagccaaaggacgttaccaggtacgacttagaagacctcttcaaaccttccatcacccca
gaaatccaaactagagtggcattcattggagacacactacacttccttcccctaggggct
atcagagagatatttacaaactcccaaaaacttcacactctctatgcaacaatggtactg
ccccccgaagccatgcacagaatgcactcaattcaccccagcatctacgagctagaattc
catgaaagaaatttcatatacaagccgggaggacatgccggggcgtcttattgccacgaa
tactcacaacttcagtggctcaaggtcgggaaatttgagtggtgcgacaaaaaatatcag
aagcactatgtgacatcacagattctggaaaccaagggtgcaaatcaccttttcgtgttc
cagcgcggcaatttcgccacccctacctaccgaactttcggggtagagacaaaatttgtc
acactcccacccatattcctcccaaagaaatacaacgcgcggtatccgataaagaaaact
gtggcacagcagctatttctctacatcaagtctgtgaaaacagtcacggagagagacatc
tgggccaaagtgagacagatcataaagaccgctgagctccaaagctactcggcaaaagaa
ctcgcactcattgtcaactactacttgctcatttccaagctggactctgtcacatgtttc
gacaatgtgcttacagggggtgcgctcaagaaactcttcaaacccattgtggcttggtgg
tccaccttcaaaggcaagattttcgggaaggaggagttcgaacaacttatggaggcgctc
gagtgggttgacgtgtcactgtcctacagagtggagacatacagccaagccaacccaaac
aatcaacccaaggtgatgttcgggtatgagtggctcagcacagaaacgggaaccccaggg
acagaggaggacgtcgctcccgaaaccccacaagaggacgaggacccacatgaaaagtat
atccaggccctccaaatactgacgaaggccctcgatcaggagagcgccccaccaccaaca
gaaccagcccaaagctccagcatcaatgatccacaacaggaggagcacctccgctcatcc
cacgacctccacactgatgaatctccaagctgctcaggaagcttgagttcttatgcttgc
cactgcccatgcggcactgagctcaaaattttttcagccgagtttccacccattccccca
ctatcacacggcgatcggctaaaaaatagggaagcattcttcttctcaagagatggcact
ccctacagctacactgggggttcccacgtgtccagaggatggccggctttccttgaccag
atcctggccactgctgagttggtgaggcctctcccccacttcaaccaatgcctcatccaa
aaataccaaaggggcgcctccatccccttccacagcgacaatgagccatgctacgatgtg
gaccaccaagtgctcacaatcaacctcaccggcgaagcggaattcaaaactagctgcaaa
gccggttcagggagttgcacgctggtagagaaccagttccacctatcccccccaggcttc
caaaagacgcataagcacagtgtagtctcacttagtgcggggcgagtctcccttacattc
cgctccactgtcaagcagggtgttacctctgaagagggcgattatgttgagcccgacaat
ctgccatggaaggcctggctcgagaaattgagaaacctgggattcaggggcacacagttg
caatatgatccaaatggagccttgatctcaccaatcgaaagcatcaagtcacttccgaag
tgctccccggagaaggtcaacccctccctcctcaagatgctgaatagtcaggctcgcgca
ccaactccattttcgccgagccccatcagagcaaaagcctattcctcagacgttaagaac
tcccgaattggcgcattactccgacagcagggcaaggattggggccaccgtttcgattca
ctcgtggagaatgggcaaagacagctagccatcagtgtgatccatggggccggcggctct
gggaaatcaagggcgttgcagatgtacctaaaagacaacccagatgctgatgtcacgata
gtgctgccaactaacgagcttaggctagactggttgaagaaattacccaccttcccagct
gaccagatcaaaaccttcgaaaaggccttgctggcccccacgaagcccacagtcatcttc
gatgattacggcaaactgccggccgggtatattgaggccttctcgttctacatgtcctcg
gctgaacttctggtgctcaccggtgattccaagcaaagtgtgcaccacgagtctaatgag
aatgcgatgagcagcctcattgaacccttcaccctggaagctgacaagtactcacgctac
tacatcaatgccacacacagaaacaagcgtgatctggctaacaagctaggggtctactcg
gaggtcacgggaataacatccatcacccaaggcaaccaccctgtgccgggacttcacctg
cttgtcccctcactctacaagaagcaagctttcagcgagatgggccacaaggcctccacc
tatgcgggctgtcagggtctcacagccccacgcgtgcaaattctgctctcagaagagact
agtatgtgttcccgcgaagttatttacaccgccctctcccgagccgttcattccattcac
tttgtcaactgcggcccaaacaatcaggctttttgggccaagctggagagcacaccttat
ctgaaagctttcctctccacgctccgagaagacgcggcacccgtcgtgaaaccgaaggag
gaagcaccagccccagttgatcccccaaagacccacatcccagttgattcagccatgcca
atctatgaggacctactggatcagatgccggaaaagcatgagagggagatcttttcagaa
aagcatgggcacagcaattgcgtgcaaacggaggatacctttgtgcaaatgttcagtcac
cagcaggctaaggacgaaacccttctctgggccaccatcgaggcgagactggtcatttcc
aaccccaaggccaattggcaagaattcatggagaaaaaacccattggagatgtgctcttc
ggtttctacagagaagcgatggggttgcccactgaacctattgcctttgaaccacagctt
tgggagtcttgcatccatgagatccagcgtacctacttggcaaagcccatcaacatgctg
aagaatggacaggcccggcaatcccccgattatgatccgaatatgatatctctctttctg
aagtcccagtgggtgaagaaaatggagaagttgggtgccttaaagattaagcccggacaa
actattgcctccttccaccaggccactgtcatgctgtttggcacgatggccaggtacatg
aggagaatgcgggagatcttccagcctaagaacattgccatcaactgcgagatgacccca
gaagatctcacagactgggccgtgggtcctgccggccagtggaaattcgccggcccctct
ctagccaatgacttcacagcattcgatcagtcacaagatggggcgatgcttcagtttgag
gtccttaaagccaagcaccacagcattccagaggatgtcttggatgcctatctgcatatc
aaaacaaactcgaagatcttcttaggtacattggccattatgagactcacgggcgagggc
cccactttcgatgcaaacactgagtgtaacatcgctttcacccatgcaaaatttcagatt
ccgaagggtacagcccagctttacgcgggagatgactcggcaattgatggcaaccccaca
gtgagagagagtttcagattggttgagcagaaattgaagctgaggtcaaaaccggcgatc
gcgatgcaggaaaaaggagactgggcggagttctgtggatacaggattacgcccaaaggt
ttcatcaaggatccaaagaaacttcacgcgagtctggtgcttgaaaagaagaaaggcaat
ttgaggaatgtgctgaggtcttatgagcttgacctggccctggcatatcagcaccgggat
gaacttcacgaattactctctgaggaggagctgcgtcttcactacgacacggttcgtacg
ctagttaagtcaggtggaggagaggttttgaaaacttttcttcccaaagatgaatcactt
tattaa
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