Viruses: 40076652
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Entry
40076652 CDS
T40000
Symbol
rtcB, FDH44_gp189
Name
(RefSeq) Sphingobium phage Lacusarx; tRNA splicing ligase
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Virus
1980139
Sphingobium phage Lacusarx
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
RtcB
DUF4514
Motif
Other DBs
NCBI-GeneID:
40076652
NCBI-ProteinID:
YP_009600818
RS:
NC_041927
UniProt:
A0A1W6DX78
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Position
NC_041927:79481..80785
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AA seq
434 aa
AA seq
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MKIEMVPHDHGRGLIKMWEPEGYPFEAEAMAQLRNLSKMPFVHKHVAAMPDAHMGKGACV
GTVIATKGVIIPAAVGVDIGCGMMALRTNLTASMLPDSLSHIRGMIEAAVPHGRTDNGGK
NDRGAWGETPKSFFDRWNYLSSGYAKLVEKHPKINHWAVDRHLGTLGTGNHFIELCLDED
QFVWVMLHSGSRGVGNKIGTYFIEAAKREMERYHIDRFLPDQDLSYLVEHTEVYDDYVEA
VEWAQEYAMENRKAMMGAVLNVMHKVLPPFMVTEQAVNCHHNYVTREHHFGENVWVTRKG
AVQARKGTLGIIPGSMGTGSFIVEGLGNADSFCSCSHGAGRVMSRTQAKKMITMEEHAKA
MVGIEARLDADIIDESPAAYKPIGAVMVGIEARLDADIIDESPAAYKPIGAVMDAQSDLV
EIKHRLRQVLNVKG
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgagatggtcccgcacgaccacggacgcggcctgatcaagatgtgggagccc
gagggttaccccttcgaggccgaggcaatggcgcagctccgcaacctgtcgaagatgccg
ttcgtccacaagcatgtcgctgcgatgcctgacgcccacatgggcaagggcgcctgcgtc
ggcactgtcatcgccaccaagggcgtgatcattccggctgcggtcggcgtggacatcggt
tgcgggatgatggcactgcggaccaacctgaccgccagcatgttgcctgacagtctgtcg
catattcgcggaatgatcgaggcggcggtgccccatggccgcaccgacaacggcggcaag
aacgatcgcggggcgtggggcgagaccccgaagagcttcttcgatcgctggaactatctg
tcgagcggctatgccaagctggtcgagaagcatccaaagatcaaccattgggccgtcgat
cggcatctcggcactctcgggactggtaaccacttcattgaactgtgcctcgacgaagac
cagttcgtgtgggtgatgttgcactcgggctcgcgaggcgtcggcaacaagatcggcacc
tacttcatcgaagcggccaagcgcgagatggagcggtatcacatcgaccgcttcttgccg
gatcaggacctttcctatctggtcgagcataccgaggtctacgacgattatgtcgaggcc
gtcgagtgggcgcaggaatatgcgatggagaaccgcaaggcgatgatgggcgcggtcctc
aacgtcatgcacaaggtgcttccgccgttcatggtgaccgagcaggccgtcaattgccat
cacaactacgtcacccgcgagcatcatttcggcgagaacgtctgggtgacgcgcaagggc
gccgtgcaggctcgtaagggcaccctcggcatcatccccggctcgatgggcaccggcagc
ttcatcgtcgaaggtctgggcaacgcggacagcttctgttcgtgcagccacggcgccggg
cgcgtgatgagccgcactcaggccaagaagatgatcacgatggaggagcacgcgaaggcg
atggtcggaattgaggctcggctggacgcagacatcatcgacgagagtccggcggcctac
aaaccgatcggggcggtgatggtcggaattgaggctcggctggacgcagacatcatcgac
gagagtccggcggcctacaaaccgatcggggcggtgatggatgcccagagtgatctcgtc
gagatcaagcatcggctccgtcaggtgctcaacgtaaagggataa
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