Viruses: 41324355 Help Entry 41324355          CDS       T40000                                  Symbol FLB09_sLgp1 Name (RefSeq) Cache Valley virus; polymerase   KO K25345   Peribunyaviridae RNA-directed RNA polymerase L [EC:2.7.7.48 3.1.-.-] Virus 80935  Cache Valley virus Taxonomy SSDB OrthologParalogGFITVOGVOG cluster Motif Pfam:  Bunya_RdRp L_thumb_ring_vir L_protein_N Motif Other DBs NCBI-GeneID:  41324355 NCBI-ProteinID:  YP_009666950 RS:  NC_043618 UniProt:  A0A240FC80 LinkDB All DBs Position NC_043618:49..6765 Genome browser AA seq 2238 aa AA seqDB search MEDQMYDQFLKRIQSAKTATVAKDISTDILEARHDYFGRELCASIGIEFRNNVLLDEIIL DVAPGINLMNFNIPNVTPDNYIWDDDFLIIMDYKVSVGNDSTEITYKKYTTLILPVMEQI GIPTEIAIIRANPVTYQISIIGENFKAKYPNIPIQLDFSKFFELRKLLLDKFADDEEFLL MIAHGDFTLTAPWCMDDTPELYDHPIYKEFIGSMPPRFVNLFDEAISFSAYSAERWNSLL YTAKAKTEQDYQEFLSEKSHAIFNMNGEYMKPTQSEIDKGWELMSRRISEERDIITDINK QKPSIHFIWAKNANRKLSSATAKLIFLSNSLQSIIEPSTWTDSLKAIGKSMDIDGNVGAY ENLCMERKLIARSTGKKIDNKRLEAIKIGNALVLWEQQFILANDLFKGQERQKFFKNFLG IGKHKNFKDKTTTDLELDKPKILDFNNTIVLMAARSMINKNKTFLAQTNTLENLHPIMGV FSDQIKEASEDTFNTLKKINKTCFWQCITDISMLMRNILSVSQYNRHNTFRVAMCANDSM YALVFPSSDIKTKRATVVFSVVCIHQEKQSIMDAGALFTTLELKTKNFISISKAIRLDKE RCQRIVSSPGLFLLSALLLYNNNPNISLVDVLNFAFYTSLSITKSMLSLTEPSRYMIMNS LAISSHVKDYISEKFSPYTKTLFSVYMVNLIKRGCSSANEQSSKIQLRNIYLSDYEITQK GVNDERNLESIWFPGRVNLKEYINQIYLPFYFNAKGLHEKHHVMIDLAKTVLEIEMTQRM DDLGIWSKHGKKQHVNLPILIHSLAKSLILDTSRHNHLRNRVESRNNFKRSITTISTFTS SKSCIKIGDFREIKAKNLATSVKSQQKACEKYRLSNPLFLVDEESTLETRHCSYEDLVAK IPNYRDYISVKVFDRLYELFKLKELDDRPFIDQAMEMMQKHKDFSFTFFNKGQKTAKDRE IFVGEFEAKMCMYVIERISKERCKLNTDEMISEPGDSKLRILEKKAEEEIRYIVEKTKDS IQKGDPTKALKLEINADMSKWSAQDVFYKYFWLIVLDPILYPNEKKRMLFFMCNYMQKVL ILPDDLLSNILDQKTPYNNDLILNSTNGLNANFVNIKRNWLQGNFNYISSYVHSCAMMVY KDIFKETMKLLDGDCLVNSMVHSDDNQTSLAIMQNKVKDDMVIQFAAHTFESVCLTFGCQ ANMKKTYITHTCKEFVSLFNLHGEPLSIYGRFLLPSVGDCAYIGPYEDLASRLSATQQSI KHGCPPSLAWLAISCSHWITHLTYNMLDEQVNCPTNHLPFTNRKDIPVELNGYINAPLYL ISLVGLEAGNLWFLIEMLKKLVPIDKQRETIQTQCQWLAQLGNLTESEKFRFKILRYLTL DTEVSTDSNMGETSDMRSRSLLTPRKFTTPGSLNKLVSYLDFKNSMSNDDYKETLSYMLQ NPELLVTKGENKEQFMTSVLYRYNSKRFKESLSIQNPAQLFIEQVLFSHKPIIDYSSIFD KLSSLVESDIIADLPEIIGRVTFPQAYQMIVRDINHLPLDLEDISIVYKYCILNDPLMIT AANTSLLCVKGTPQDRNGLSANQMPEFRNMKLIHHSPALVLKAFSKGTTDLPGAEPTELE KDLHHLNEFLESTGIKEKIGQNMDNPPKHLTGMEITMYKIRELTKLYQLCYDYIKSTEHK VKVFILPMKAYTSVDFCTLVQGNTISDDKWFTMHYLKQILSGSAKGNIVTTSTTEQIIAN ECFRVLTHFADSFVEEASRLSFITEVVDNFSYKNIPVNSLYNTILGSNLRLDFIPLLFRM QALTQADLNKFDALKTNERVSWNNWQTNRSLNSGVIDLTISGYLRSIRIVGEDKILKIAE LTIPNFYPNTVFHAGNKLLNSRHGLKFEFMSEQVLDDKFSYYITYQKKRAHMYTYQVSTI EHIYRRNQEGLAARGNRYNRMVPVCPVVLSVRDELFRMSMNNVFSLNMTNFTMSRLYISP DEMATIKKAHMSKMMFFNGPDIKAGIINLTALMRTQELLSLNYDNICKSSIVPFCRILSC EGSEDNGELIFLSDEVMDFTISEEIESMPIFTIKYQKRGNEKMTYKNAISKLVSHGVEEI TTVFDFSKDGFYSKKNLGIINTLCSIINLLETNEWSSILLNSFHIAMLLEGMDREFHLFS LPSAFFNNVASGNINWTKLLKFIKSLPKIHNEPWSMMMERFIEKTIYLIEKELNKEANFS DFLDELEFQTGKSMFSFF NT seq 6717 nt NT seq  +upstreamnt  +downstreamnt atggaggaccaaatgtatgatcaattcctcaagaggattcaatcagctaaaacagccact gtagcaaaggacatcagcactgacattttggaagcacgtcatgattattttggtcgagaa ctttgtgcttcaataggcatagagtttagaaacaacgttctcttagatgagatcatcctg gatgttgcacctggaattaacctgatgaacttcaatataccaaatgttacacctgataat tacatctgggatgatgatttcctaattataatggattacaaagtctcagtagggaatgat agtacagaaataacatacaaaaaatatacaaccctgattctaccagttatggagcaaata ggtataccaactgaaatagcaatcataagggcaaaccctgtgacatatcagatcagtata ataggtgaaaattttaaagctaaatatccaaatatacccatacagctagatttttcaaag ttttttgagttgaggaaattattactggacaagtttgcagatgatgaggagtttctactt atgattgctcatggtgactttacactgacagcaccatggtgtatggatgatactccagaa ttgtatgaccacccaatttataaagaattcataggatccatgccccctagatttgtgaac ttattcgatgaagccatttcattcagtgcctattctgctgaacgctggaacagcctgttg tatactgcaaaagcaaagacagaacaagattatcaagagttcctctcagaaaagtcacat gctatatttaacatgaatggtgaatatatgaaacccacgcaatctgaaattgataaaggc tgggaattaatgagccgaagaatttctgaagaaagggatatcataacagatataaataaa cagaagccgtccatacattttatatgggcaaaaaatgctaataggaaactaagtagtgca actgcaaagctcatatttttgtcaaactctttacagtctatcattgagccttcaacttgg acagattcattaaaagcaattggcaaaagtatggatatagatggcaacgttggagcatat gagaatctctgtatggaaaggaagttgatagccagatcaacaggaaaaaagatagacaat aagaggctagaagccattaaaataggaaatgcattagtgctttgggagcaacaatttatc ttggcaaatgatctcttcaaaggacaggaaagacaaaaattctttaagaatttcttaggt attgggaaacacaaaaatttcaaagacaaaactacaactgacctagaactagataagcca aagatattagacttcaacaataccattgtcctgatggcagcaaggtcaatgataaacaaa aacaaaacattcttggcacaaactaatacattggaaaatctacatccaataatgggggta ttctcagaccaaataaaggaggcttcagaagatacatttaacacattaaaaaagattaat aaaacatgtttttggcaatgcataacagacatctcaatgttaatgagaaatattctttca gtatcacaatataacaggcataatactttcagagtagctatgtgtgcaaatgactctatg tatgccctcgtgttcccttcttcagacatcaagacaaaaagagcaacagttgttttctca gtagtctgtattcatcaagaaaagcaatctattatggatgcaggtgccttatttacaact ttagaattaaaaacaaaaaactttatatctattagcaaggctattaggctagataaagaa agatgccagagaatagtgtcatccccaggcttattccttctaagtgctctattattgtat aataataacccaaacatatctcttgtagatgttttaaattttgcattttatacaagttta tctataactaaaagtatgttatctttaactgaaccatctagatatatgataatgaactct ttagccatctccagtcatgtaaaagattatatatctgaaaagttctcaccctatactaag acactttttagcgtctatatggtaaatttaatcaagagaggttgtagctctgccaatgaa caatccagcaaaatacagttgaggaatatttatctttcagattatgaaataacacagaaa ggtgtaaacgatgagaggaacttggaatctatatggttccccggtagagtaaacctcaaa gaatatatcaatcagatttacttacctttttattttaacgcaaaaggccttcatgaaaag catcatgttatgatagatctagccaagacagttcttgaaatagaaatgactcagaggatg gatgacttgggcatatggtctaagcatggaaagaaacaacatgttaatctaccaatattg attcattccctagctaaatcattaattttagacacttctagacataatcatttgagaaac agagtggagagccgcaacaatttcaagagaagtataacaaccattagtacatttaccagc tcaaaatcatgcattaagattggagatttcagggagatcaaggcaaaaaacctagccaca tcagtaaaatctcaacagaaagcttgtgagaagtaccgcttatcgaatcctttattttta gtagatgaggaatctacattagaaaccagacattgcagctatgaagatttagttgcaaag atcccgaattatagagattacatttctgttaaagtatttgatagattatatgagttattc aaattaaaagaattagatgataggccatttatagatcaggctatggagatgatgcaaaag cacaaggacttttcatttacattctttaataaaggacaaaagacagcaaaggacagagaa atatttgtaggtgagtttgaagcaaaaatgtgtatgtatgttatagagagaatctctaaa gaaagatgtaagttaaatacagatgaaatgattagtgaaccaggagattcaaaattgagg atcttggagaaaaaagcagaggaagagataagatacatcgtggagaagacgaaggatagt attcagaaaggtgatcctacaaaagcattgaaactagagattaatgctgatatgtcgaaa tggagtgcgcaagatgttttctataagtatttttggcttatagttttggatccaatactt tacccgaatgagaaaaagaggatgttatttttcatgtgtaattatatgcagaaagtgctg atcttaccagatgatttgctatccaacatattagatcaaaaaactccatacaacaatgat ttaattctaaactcaactaatggtttaaatgccaactttgtaaacataaaaaggaattgg ttacaagggaattttaattacatctctagctatgtacatagttgtgcaatgatggtttac aaagatattttcaaagagactatgaagttgctggacggagattgtctggtaaattctatg gttcattcggacgacaatcagacatcccttgccattatgcaaaataaagtcaaagatgac atggttatacaatttgctgcacatacatttgaatctgtctgtctcacttttggatgccag gcaaatatgaaaaaaacatatataacccatacatgcaaagagtttgtgtcactttttaac ttacatggtgagccattgtctatatatgggagattcttactacctagtgtaggagattgt gcatatatagggccatatgaagatctggcaagtaggctatcagccacacaacaaagcata aagcatggatgcccacctagcttagcatggcttgcaataagctgcagccattggataact catttaacatataacatgctagatgagcaagtgaattgcccaacaaatcatttaccattt acaaatagaaaggatataccagttgagctaaatggctatatcaatgcgccattatacctt atatcattagtaggccttgaagctggcaacctatggtttcttatagagatgttgaagaaa ttggtaccaattgataagcaaagagaaacaatacagactcaatgccagtggctagctcaa ttaggtaatctaacagaatcagaaaaatttagattcaaaattctaagatatctgacactt gacacagaagtaagtacagactcgaacatgggggagaccagtgacatgagaagtaggtcc ttgttgacaccaagaaagttcaccactccaggatcattaaataaattagtttcatatcta gacttcaaaaattctatgtctaatgatgattataaagaaacattgagttatatgttacaa aatccagagctattagttacaaaaggtgagaataaagaacaatttatgacatcagtattg tatcgttacaattccaagcgatttaaagaaagtctatctatccaaaatccagctcaatta tttatagagcaagtacttttctcccataaaccaatcattgactatagcagtatctttgat aagttgagttctttagtggaatctgacataattgctgatttgccggaaatcatcggtagg gtcacatttccacaagcataccagatgatagttagggacatcaatcatctacccttagat ctggaggacataagtatagtgtataaatactgtatattaaatgacccactgatgataact gcagcaaacacttctctactgtgtgtcaaagggacaccacaagataggaatggattgagt gctaaccagatgccggaattcagaaatatgaaattaatacatcattctcctgcattggta ttaaaagccttcagtaaagggacaactgatctacccggtgctgagccaacagagcttgag aaagacttacaccacttgaatgagtttttagaaagcactggtatcaaagaaaaaataggg caaaatatggataacccacccaagcatttaactgggatggaaattacaatgtacaagatc agagaattaacaaagttgtatcaattgtgctatgattatataaaatctactgagcacaag gttaaagtctttatattgccaatgaaagcatatacatctgtggacttttgcacattagtt cagggtaatactatttctgatgataaatggttcacgatgcattatttgaaacaaattcta agtggatcagcaaagggcaatatagtaactacaagtacaactgagcaaattatagcaaat gaatgttttagggtattaacacactttgcagattcatttgtggaggaggcaagtcgtttg agttttatcacagaggtagtagataatttttcatataagaatataccagttaattcatta tacaatacaattttaggaagcaatttgagattggattttatcccattactttttagaatg caagcactaacacaggcagatttgaacaaattcgatgctctaaagacaaatgaaagagtg tcctggaataattggcagactaatagatctcttaattcaggtgtcatagatttaacaatc tcaggttacctgaggtctataagaattgttggtgaagataaaatcttaaagattgcagag ttaacaataccgaatttttacccaaatacagttttccatgcggggaataaactattgaat tctagacatggtttgaaattcgaatttatgtcagagcaagttctagatgataaatttagt tattatatcacataccaaaaaaaacgtgcccatatgtatacatatcaagtatcgacaata gaacatatatatagaagaaaccaggaaggccttgctgctagaggaaatagatacaaccga atggtcccagtgtgcccagttgtactgtcagttcgagatgaattgttccgaatgagtatg aacaatgtttttagtttaaatatgaccaattttactatgtccaggttatatatctcacca gatgaaatggcaactataaagaaagctcatatgtcaaaaatgatgttctttaatgggcca gacataaaggcaggtataataaatttaacagctctaatgaggacacaagagcttctatca ttaaattatgataatatttgtaaatccagtatagttccattttgtagaatactttcatgt gaagggagtgaagataatggggaattaatatttctatcagatgaagtgatggattttaca atatctgaagaaatagaatctatgccaatattcactattaaatatcaaaagaggggaaat gagaaaatgacatataaaaatgcaatatctaagttagtctcacatggtgttgaagaaatc acaacagtctttgacttttctaaagatgggttttattcgaagaaaaaccttggaataata aataccctatgctcaataataaatctactggaaacgaatgagtggtcgtcgattctttta aattcatttcatattgctatgttgttagaggggatggacagggaattccacctcttttcc ctaccatctgcatttttcaataatgtagcctctgggaacataaactggacaaaactttta aaattcatcaaatccctcccaaaaatccacaatgagccttggtcaatgatgatggagagg tttatagaaaagacaatatatttaatagaaaaggagttgaataaggaggccaattttagc gatttcctagatgagctagagttccagacaggaaaatcaatgtttagttttttctag

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