Viruses: 41324470
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Entry
41324470 CDS
T40000
Symbol
RdRp, FLA97_sLgp1
Name
(RefSeq) Schmallenberg virus; RNA-dependent RNA polymerase
KO
K25345
Peribunyaviridae RNA-directed RNA polymerase L [EC:
2.7.7.48
3.1.-.-]
Virus
1133363
Schmallenberg virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Bunya_RdRp
L_thumb_ring_vir
L_protein_N
Motif
Other DBs
NCBI-GeneID:
41324470
NCBI-ProteinID:
YP_009666911
RS:
NC_043583
UniProt:
T1WFU8
LinkDB
All DBs
Position
NC_043583:28..6792
Genome browser
AA seq
2254 aa
AA seq
DB search
METYKINIFRDRINQCRSAEEAKDIVADLLMARHDYFGREVCYYLDIEFRQDVPAYDILL
EFLPAGTAFNIRNCTPDNFIIHNGKLYIIDYKVSTDHAYGQKTYEKYTQIFGDALSELPF
DFEVVIIRADPLRDTIHVNSNQFLEIFGPLNINLDFTWFFNLRSLIYEKYKDDDRFLEIV
NQGEFTMTGPWIDEDTPELYSHPVFLEFYDSLDEMAKLTFHESMTFDATRGEKWNQNLQK
VINRYGNDYNIFVKEAAAGIFRCEGNYPKPNHDEITIGWNQMVQRVSTERNLTQDVSKQK
PSIHFIWGQPDETSNATTPKLIKIAKALQNISGESTYISAFRALGMLMDFSENTALYEAH
TSKLKSMARQTSKRIDTKLEPIKIGTATIYWEQQFKLDTEIMNTKDKSHLLKDFLGIGGH
VQFSKKTIDDLDTDKPTILDFNKKEVIDFCKFQYENVKKILSGDNNLERIGCYLEEYGAN
IASCSKDTWDQINQIGKSNYWACIKDFSVLMKNMLAVSQYNRHNTFRVVCCANNNLFGFV
MPSSDIKAKRSTLVYFLAVLHSTPQNVMHHGALHATFKTGSKYLSISKGMRLDKERCQRI
VSSPGLFMLTTLMFAGDNPTLNLTDVMNFTFHTSLSITKAMLSLTEPSRYMIMNSLAISS
HVRDYIAEKFGPYTKTSFSVVMANLIKRGCYMAYNQRDKVDMRNICLTDYEITQKGVRDN
RDLSSIWFEGYVSLKEYINQIYLPFYFNSKGLHEKHHVMIDLAKTILDIERDQRLNIPGI
WSTTPRKQTANLNITIYAVAKNLIMDTARHNYIRSRIENTNNLNRSICTISTFTSSKSCI
KVGDFEKEKSSATKKAADCMSKEIKKYTIANPEFVDEELLNATIRHSRYEDLKKAIPNYI
DIMSTKVFDSLYQKIKRKEIDDKPTVYHILSAMKNHTDFKFTFFNKGQKTAKDREIFVGE
FEAKMCLYLVERISKERCKLNPDEMISEPGDSKLKKLEELAESEIRFTAATMKQIKERYL
AEMGEASHMIAYKPHSVKIEINADMSKWSAQDVLFKYFWLFALDPALYLQEKERILYFLC
NYMQKKLILPDEMLCSILDQRIKHEDDIIYEMTNGLSQNWVNIKRNWLQGNLNYTSSYLH
SCSMNVYKDILKRAATLLEGEVLVNSMVHSDDNHTSIVMIQDKLDDDIVIEFSAKLFEKI
CLTFGNQANMKKTYITNFIKEFVSLFNIYGEPFSVYGRFILTSVGDCAFLGPYEDVASRL
SATQTAIKHGAPPSLAWTAIALTQWITHSTYNMLPGQINDPTSSLPSHDRFELPIELCGL
INSELPTIAIAGLEADNLSYLVRLSKRMSPIHLCREPIQHQYENIHTWDISKLTQCDIFR
LKLLRYMTLDSTMSSDDGMGETSEMRSRSLLTPRKFTTASSLSRLHSYADYQKTIQDQQK
IEELFEYFIANPQLLVTKGETCEEFCMSVLFRYNSRKFKESLSIQNPAQLFIEQVLFANK
PMIDYTSIHDRLFGIQDDPNINDATCIIGKKTFVETYQQIKIDVEKFTLDVEDIKTIYSF
CIMNDPILVACANNLLISIQGVEMQRLGMTCCYMPEIKSLKVIYHSPALVLRAYVTDNYE
QKGMEPDEMRRDIYHLEEFIEKTKLRTNMQGRIANNEIKLMKRDLKFEVQELTKFYQICY
EYVKSTEHKIKIFILPKKAYTPIDFCSLVTGNLISDNKWMVVHYLKQITVPAKKAQIATS
IDLEIQIAYECFRLIAHFADMFLNDDSKKAYINAIINTYTYKDVQVSSLYKKIKNSRLRS
KIIPLLYHLGDLQQIDVDRFDAEKAEEQITWNNWQTSREFTTGPIDLSIKGYGRSIRIVG
EDNKLTAAEMQLSRVRSDIVSRHGQALLNKPHGLKLEKMEPVTDLNPKLWYIAYQLREKK
RYHYGVFSTSYIEEHNSRIEASRIRKTNKWIPVCPIAISKQSSDGKPSLAKIPMLNIGEI
KFTKLQIAVDDHAMIRKAPFSKMVFFDGPPIQSGGIDIGKLMKNQNILNLRLDNIQSITL
LDLCRIFSCRGSKVDQDAFEFLSDEPLDEDVIDELDSSPALVVSYTKKSTKSNSFKNVIV
RALIRECDIFEDIMDITDDGFTSDSNLEVLENLTWILNMLATNQWSTELLACIHMCLYRN
EMDHIYHNFQVPEIFVDNPISLNVKWDEVIMFLNILRDRDYKFEPWVSILNHSLTKAIEY
AYKKMEEERKQKSTGINKFLKGKKMGGRSKFDFQ
NT seq
6765 nt
NT seq
+upstream
nt +downstream
nt
atggagacatacaagattaacatttttagagataggatcaaccagtgtcgaagtgctgaa
gaagccaaagacattgttgctgatcttctcatggctagacatgactactttggtagagag
gtatgttattacctggatatcgaattccggcaggatgttccagcttacgacatacttctt
gaatttctgccagctggcactgctttcaacattcgcaattgtacaccagacaattttatc
attcacaatggcaagctttatatcattgactataaagtatcaactgatcatgcatatggt
caaaaaacttatgaaaagtacacccagatctttggagacgcattgtcagaattgccgttt
gattttgaagttgtgatcatccgtgctgaccctctgcgagatactatccatgttaattca
aatcaattcttggaaatatttgggccgctcaacataaaccttgattttacttggttcttt
aatttgcgatccctgatatatgagaaatataaggatgacgacagattcctagaaattgtg
aatcaaggtgaatttacgatgactggaccctggattgatgaggataccccggagctctat
tcacaccctgtctttttggaattctatgattctttagatgagatggctaaactgacattc
catgagtctatgacatttgatgcaactcgcggtgagaaatggaatcaaaatctacaaaag
gttataaatagatatggcaatgattataacatttttgtgaaagaggccgctgcaggaatc
tttagatgtgaagggaactacccaaaaccaaatcatgatgaaatcacaatcggttggaat
caaatggttcaaagagtgagtactgagagaaacctgactcaagatgtcagcaagcaaaaa
ccatctattcatttcatatggggtcaacctgacgaaacatcaaatgcgacaacaccaaaa
ctaatcaagattgcaaaagcactccaaaatatttctggcgagtctacatatataagcgca
ttcagagcattgggtatgcttatggacttttctgagaacacagctttatatgaagcacac
actagcaaactaaaaagtatggcaagacagacatcgaaaagaattgatactaaactggaa
ccaatcaaaataggcacggcgacaatttattgggaacagcagtttaaactggatactgaa
ataatgaatacaaaagacaaatcacatttgctaaaagattttcttggcatagggggtcac
gtgcaattttcaaaaaagaccattgacgatttggatactgacaaacctactatattagat
ttcaacaaaaaggaagtcattgatttttgcaaattccagtatgaaaatgtaaagaaaata
ctatccggagataataatctagagcgtataggatgttatttagaagaatatggtgcaaat
attgcatcatgttcaaaggatacatgggatcagattaaccagatagggaagtcaaattac
tgggcttgtattaaagatttttcagtcttgatgaaaaatatgttggcagtttctcaatat
aataggcacaatacttttcgtgtagtgtgttgtgcaaacaataatctgtttgggtttgta
atgccttcttctgatattaaagcaaagcgatccacacttgtttacttcttagctgtgttg
cattctactcctcagaatgtgatgcaccacggtgcattgcatgcgacatttaaaactggt
tcaaaataccttagtatctctaaaggaatgcgtttagataaagaacgatgtcaacgcata
gttagttcaccgggactttttatgttgactacattgatgtttgcaggagacaatccgaca
ctcaatttgactgatgtcatgaattttacattccacacttccctgtctataaccaaagct
atgctgtcattgacagaaccatcaagatatatgataatgaattcattagccatatccagt
catgttagagattatatagcagaaaaatttggcccttatacaaagaccagcttctctgta
gtaatggcaaacttgattaaaaggggatgttatatggcatataatcaaagagataaagta
gacatgaggaatatctgcctaacagattatgaaataacccaaaaaggtgtgagagataac
agagacctatcatcaatctggtttgaaggctatgtatcactaaaagaatatattaaccaa
atatatctaccattttacttcaattcaaaaggtttgcatgaaaagcatcatgttatgata
gatctggctaagacaatcttagatatagaaagggaccagagattaaatatcccaggaata
tggtctacaacacctagaaaacaaactgcaaatttaaatataactatctatgcagttgca
aaaaatctaataatggacactgctagacataattatattagatcacggatagaaaacaca
aacaacttaaatagatcgatatgcactatttctacattcaccagctctaaatcatgtatt
aaagtaggcgactttgagaaagaaaaaagctcagcaacaaaaaaggctgcagattgcatg
tcaaaagagataaagaagtatacaattgcaaacccagaatttgttgatgaagagttacta
aatgcaactataagacattcacgctatgaagacttaaaaaaagcaatcccgaattatatt
gacattatgtcaactaaagtatttgattctctgtaccagaaaataaaaaggaaggagata
gatgataaacccactgtgtatcatatactctctgctatgaagaatcacacagattttaag
tttacattctttaacaaaggccaaaaaacagcaaaggatagggaaatattcgtaggcgaa
tttgaggcaaaaatgtgcttgtatttagtggagaggatatctaaagaacgctgtaagttg
aatccagatgagatgattagtgaaccaggcgattctaaattgaaaaaattagaagagctt
gcagagtctgaaatacgattcacagcagcaactatgaaacagatcaaagaacgctattta
gcagaaatgggagaagcaagccatatgatcgcatataaaccacattctgttaagattgaa
atcaatgcagacatgtcaaaatggagtgcccaagatgttttattcaaatatttctggttg
tttgcattagatcccgcactttatctgcaagaaaaagaaaggatattgtacttcctatgc
aattatatgcaaaaaaagctaattctgcctgatgaaatgctctgtagcatccttgaccaa
cgtatcaaacatgaggatgatataatatatgaaatgaccaatggcttatcgcaaaattgg
gtcaatattaaacggaactggctgcaggggaatctcaattacacaagtagctacctacat
tcatgttctatgaatgtttataaggatattctaaagagagcagccactttactagaaggg
gaagttttagtcaattctatggttcattctgatgacaatcacacttcaatagtgatgatc
caagataaattagatgatgatattgttattgaattttctgcaaaactatttgaaaaaata
tgtctaacttttggaaatcaagcaaatatgaagaagacatatataacaaatttcataaag
gagttcgtttcactttttaatatttatggtgagccattttctgtttatggtcgctttatt
ttgacatctgttggcgattgtgcttttcttggaccatatgaggatgttgccagtaggttg
tctgcaacgcagacagcaattaagcatggagcacctccatcacttgcatggactgctatt
gcattaactcagtggataacacatagcacatataacatgcttccaggtcaaatcaatgat
cctacttcatctttacctagtcatgatagatttgagctgcctatagaattgtgtggctta
ataaattcagaattacccactatagctatagcaggtttggaagcagataatctaagttat
ttagttaggttatcaaaaagaatgtcccctatacatctttgccgtgaaccaatccagcat
caatatgagaatatacatacatgggatataagtaaactgacacaatgtgatattttcaga
cttaagcttttaagatacatgacgttagactcaactatgtcatctgatgatggaatgggc
gaaactagtgaaatgagatctaggtctcttctgacaccaagaaaattcactactgcaagt
tcgttatctagattgcattcatatgctgattatcaaaaaacaatacaagaccaacagaaa
attgaagaattatttgaatattttatagccaaccctcaactattggttacaaaaggtgag
acttgtgaagagttctgtatgtctgtattgttcagatacaacagtcgtaaatttaaagaa
tcattgtctattcaaaacccagctcagctcttcatagaacaagtattgtttgcaaataaa
ccaatgatagactatacaagtattcatgataggttgtttggtatacaagatgacccaaat
ataaatgatgctacatgtattattggcaagaagacttttgttgaaacatatcagcaaata
aaaattgatgtagaaaaatttacacttgatgtagaggatataaagacgatatatagcttc
tgtataatgaacgaccctatattagttgcttgtgcaaacaacttgttaatttcaatacag
ggagtggagatgcaacgattgggtatgacatgctgttatatgccggagattaagagcctt
aaagtaatttatcatagtcctgctctcgtattacgtgcttatgtaacagataactatgag
caaaaagggatggagccagatgaaatgcggagagatatatatcatttagaagaatttata
gagaagacaaaattgaggacaaatatgcaagggagaattgcaaataatgaaattaagtta
atgaagcgagatttgaaatttgaagtgcaggaattgactaaattctatcagatctgttat
gaatatgtgaaatcaacagaacacaaaattaaaatattcatccttccaaaaaaggcttac
actcccattgatttctgctcattagtaacaggtaatctgatatcagacaacaaatggatg
gttgttcactatttaaaacaaataactgtcccagcaaagaaggcacaaatagccacatct
atagatctggaaatacaaatagcctacgaatgtttcaggctaattgcacattttgctgat
atgttcctaaatgatgactccaaaaaagcttatattaatgcaattattaacacatataca
tacaaggatgttcaagtatccagtctctacaagaaaatcaaaaattcgagactacgttca
aaaattataccattattatatcacctgggcgatttgcaacaaatagacgttgacagattt
gatgcagaaaaagcagaagagcagatcacatggaataactggcaaacatctcgagaattt
actactggtccaattgatctatcaatcaaaggttatggacggtcaataaggatcgtaggt
gaggacaacaagcttacagctgcagaaatgcaattgtcaagagtgagaagtgatatagta
tcaaggcatggacaggctttattgaacaaacctcatgggctaaaattagagaaaatggaa
ccagtgactgatctaaatccaaaattatggtatattgcataccaattgcgtgagaaaaag
cggtatcactatggggtctttagtacatcttatatagaagagcataactcaaggatagaa
gcatctcggatacgtaagactaataaatggataccagtttgccctattgctatatcaaaa
caatcatctgatggaaagcctagtcttgcaaaaatccctatgttaaatattggggagatt
aaatttacaaaactacagattgcagtagatgatcatgcaatgattaggaaagccccattt
agtaagatggtgttctttgatggcccacccatacagagtggtggcattgacattggaaag
cttatgaagaaccaaaatattctcaatttgaggttagataatatacagagtataacatta
ttagatttgtgccgcatattttcatgccgagggtctaaagtggatcaagatgcatttgaa
ttcttatctgatgaacctttggatgaagatgttattgatgaattagatagctcacctgca
ttagtggtatcttacacaaagaaatcaaccaaatccaatagtttcaaaaatgttatagtt
agagcattgataagagaatgtgatatatttgaagatataatggacataacagacgatgga
ttcacatctgatagcaatctagaggtgttagaaaacttaacatggattttaaatatgctc
gcaacaaatcagtggtctacagaactgttagcatgcatacacatgtgtttatatcgcaat
gagatggatcatatctatcacaattttcaagttccagaaatatttgtcgacaatccaatc
tcattaaatgtaaagtgggatgaagtaattatgttcttaaacatactgcgagacagagat
tacaaatttgagccatgggtgtctatactgaatcattccttaactaaagctatagagtat
gcttacaaaaagatggaagaggagaggaagcagaaatcaacaggcatcaacaaattctta
aagggtaaaaaaatgggtggcagatcaaagtttgatttccagtag
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integrated database retrieval system
