Viruses: 41900281
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Entry
41900281 CDS
T40000
Symbol
CVA-1_088R, F8205_gp025
Name
(RefSeq) Paramecium bursaria Chlorella virus CVA-1; Chlorovirus glycoprotein repeat domain-containing protein
Virus
42683
Paramecium bursaria Chlorella virus CVA-1
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Chlorovi_GP_rpt
Motif
Other DBs
NCBI-GeneID:
41900281
NCBI-ProteinID:
YP_009701716
RS:
NC_044937
UniProt:
M1HVD5
LinkDB
All DBs
Position
NC_044937:38300..42808
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AA seq
1502 aa
AA seq
DB search
MFNSSTFRKNILKYAGINFDTGDVTVRNQLTVVSNTNFIGNYTGLPAISRSDVNGNLLGN
FVDVTGNITTGFFFGDGSQITGISNGPLPSVIRTDVQGNLTGTNANITGTMSTGSFFLGN
GTFISNVVTVLPKNANADILRGNVTAAGNVDASNATARILRVSGSTFVTGQVNVTGNVSA
SYLFGNGAFLTGVTADLPDSANMNIVGNVVASNVTASNVSTEILRLNGPATVNGQVTVVG
NVSGNLSGNGAFLTSIFTGNLSRDVIGNVTAPGNISAGLFVGRGDFLQLNGSTIQPQGNV
LDQAERLALNASIGTIVTQEDVNRQFMLTSLPPSSNTNWLQFSGNNFPVASLFGRLGDVV
LISGTDIQSIQGQSIAGSGDITSANIDIRGNVLAPANVIVTNVSTITLTAGNATVTGQVN
VSGNTSALYYFGDASGITDAAYVLPRRGNIDIQGNVISNGNVNAANVSANIGVINGNLFV
AGQVTVNGGNVSSASYFLGDGSRLHGVIPTFSATSAINIIGNVSAPGNVIAANVVANLLR
VYGNAVVSGQVDASSNISANYFIGNGLFLTGVNVVLINSQVVNINGNVRASGNVDAANVM
ANNMRITGNVFVAGQVNVTGNVAAPFFYGNGLTLTGITATLTAGQVMNINGNVSAPANVN
AEGVSANTILSVTGNAIITSQVNVIGNVVSSGFFFGSGSALTNVPATVTAGQAINIFGNV
VAPGNVNAENVVANVLIVNGNVVVGGQVNITGNIVANTFTGIGNLLSNIRLFGTQNVNIS
GNVFSAGNVDASNIFANSLVVRGNAIMGELNISGNISAPFYFGDGSRITNIPACTAPTSI
CFVQPSSGFTSNTFCLDYAPTNGWSFVLPSNGAPSTIGIQTYSLPLDPSRPFSQLPGNVT
QTVSTPWAFSNGIWTSNVTLTSNGQFGPNTFNMGFSNFFGRYLGNSSNTAISSVSTPVNA
LGLVSNVFANLNSVNIVASYVNPNTGDISMCVAGTENSVSNPFMGLGLSNNSIYYIRCNK
NFTTVNGFNTIATPTPGTKKGMTYRNQMSGYFVSETEMYFALQSDVVTFTPDNLSVYNTD
IYSEDTIRNAPFPYIARINPNTRTTNWVVGLVQTDIRTPAFQISISPDRTKVFTTMQSVR
TTNIGLNFNYWRSDTTVQNQAIFNANLRTTTTTTSGTLYDALSIGIWAANGLPINNTLSQ
ITANVAIGSAIPIDVRTSSDAWSEDSNTAYYTFGSYETANVPYLWRTYNNSSNTWTVRSS
FDTGGNTLLNNLQYWMMRAPVGNPDTGAWVANIISIGNAFTPSYFIRPGGMTYSGEGNLW
FTASIYKNTSYTGNTRFTFAGNAITTPTINTSGLGFVGLWKILDSNGSYSSLTLLSNTSE
VANTSKYTACTSGFQTISVGRNVAKGTGVVKIQCISNISNISFITPAGNVFCQGLTNPSN
TRLISFDVYPNLSINGFNALSNIVAANASVGDNLQFGNAIDYNYSLNTLTTNFARLNIDG
IV
NT seq
4509 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacagttcaacatttagaaagaacattctcaaatacgcaggtataaattttgac
acaggcgatgtcacagtccgaaaccagctcacagtcgtatcgaatacaaacttcataggc
aattacactggacttcctgcaatcagcagaagcgacgtcaatggaaatctactaggaaac
tttgttgatgtcactggcaatataacgacaggattctttttcggagatggctcgcagatc
acagggattagtaatggacccctcccgtctgtcattagaacggatgtgcaaggaaacctc
actggaacgaacgcgaacatcacaggaactatgtctacaggttcattcttcctgggaaat
gggacttttataagcaacgtggtaactgttcttcctaaaaacgcaaatgccgatatcctt
agaggcaatgtcactgcggcaggaaacgtggatgcaagcaatgcgaccgcaaggatattg
cgagtatctggaagcacatttgtaacaggacaagtcaatgtcaccggaaatgtctcggcg
agttacttgtttggcaatggtgcgtttctgacaggcgtcacggcggacctcccagactcc
gcaaatatgaacattgtaggaaatgttgttgcttctaatgtcacagcatccaatgtatcc
acagaaattctcagactcaatggccccgcgaccgttaatggtcaagtaacagttgttggc
aatgttagtgggaatttatcaggcaacggagccttcttgaccagcatatttaccggaaac
ctatcaagagatgtcataggtaatgttacagcacctggcaatatctccgcaggtctgttt
gttggtcgcggtgatttcctgcagctgaacggttctacaattcagccacagggaaacgtc
ctcgaccaagcagagcggttggcgctcaatgcgtctataggaacgatcgtcacacaggaa
gatgttaaccgccagtttatgttgacaagtttacctccatcgtcaaataccaactggtta
caattcagcggtaacaactttcccgtagcttctctttttggcagactaggagacgttgtg
ctcatcagcggtacagatattcagagcatccaaggacaatctattgcgggttcgggagac
atcaccagcgcaaacatcgacatacgaggcaatgtgttggctcctgcaaatgtcattgta
acaaatgtgagcacgatcacgcttactgctggcaatgcaactgtcactggccaagtgaat
gtctctggcaacacatctgcattgtactattttggcgatgcttcgggcatcactgacgcg
gcgtatgttctccccagaagaggaaacatcgatatccagggaaatgttatttcaaatgga
aacgtgaatgcggcaaacgtgtctgcaaacatcggagtgataaatgggaacttgtttgtt
gccggtcaagtcaccgtgaacgggggaaatgtgagtagcgcaagctatttcttaggagat
ggttctcggcttcacggagtcattccaaccttttcggcaacgtccgcaataaacatcatc
ggaaatgtgtctgctccagggaatgtgattgccgcaaacgttgtggcaaatcttctaaga
gtatatggaaatgcagttgtctctggccaagttgatgcatcgtcaaatatatctgcaaac
tatttcataggtaatggattgtttttaactggtgtcaatgtcgttctgataaacagtcaa
gtcgtgaacattaacggaaacgtgagggcatctggaaatgtagacgcggcaaacgtcatg
gcgaacaatatgagaataaccggaaacgtgtttgtagctggccaagtaaatgtcactgga
aacgtggctgctccattcttttatggaaatggtctgactttgactggtatcacggctact
ctaacggctggccaagtgatgaacattaacggaaacgtgtctgctcctgcaaatgtcaat
gcagaaggtgtatctgcaaataccatcttgtcagtaactggaaatgctatcatcactagt
caagtaaatgtcataggaaacgtggtctcaagtggtttctttttcggaagtggttctgca
cttacaaatgttccagcaactgtcacggcgggacaagccataaatatttttggtaatgtt
gttgctcccgggaacgtgaatgctgaaaacgtggttgccaatgttttgatagtaaatggt
aatgttgttgttgggggtcaggtgaacatcactggaaatatagtggccaacaccttcacg
ggaattggcaacttattgagcaacatacgtctattcggaacgcagaatgtgaacatatct
ggcaacgtattttctgccggaaatgtggatgcttccaacatttttgcaaactctttggtg
gttcgtggaaatgcaatcatgggagaattaaacatctcgggaaacattagcgctccgttc
tactttggtgatggatctcggatcacaaacataccagcctgcactgctcccacgagcata
tgcttcgtccaaccttcttcgggtttcacgtctaatacgttctgcctagactacgctcct
acgaacggatggtcttttgtattgccatcaaatggcgctccatccacgattggaattcag
acatactctttaccccttgacccatctcgtccattttctcaattaccagggaatgtgacg
cagaccgtgtctactccttgggcgttctccaatggtatttggacatcaaatgtgacgctc
acgtcaaatggtcagttcggacctaatactttcaacatgggtttcagcaacttcttcgga
agatatcttggaaactcgagcaatacggccatatcttcagtgtctactccggttaatgct
cttggtcttgtttctaatgtgtttgcaaatctcaattctgttaatattgtcgcatcatac
gtaaatccaaataccggagatatttcgatgtgtgtggcggggacggaaaattctgtatct
aatccattcatgggattaggactctccaataattccatatactacataagatgcaataaa
aacttcacgactgttaatggtttcaacacaatagctacaccaactcctggaaccaaaaaa
ggaatgacatataggaatcaaatgtcaggttattttgtgagcgaaaccgaaatgtatttt
gctttacaaagcgatgtagtgacattcacccccgataatttaagcgtttataatactgac
atatattctgaagatactataagaaacgccccctttccatatatcgcaagaatcaaccca
aatacgcgaacgaccaattgggtggttggtttagtccaaactgatattagaactcccgca
ttccagatatccatatctccggacaggactaaagtttttactactatgcaaagtgtacga
actacaaacataggattaaattttaattactggcggtctgatactacggtacaaaaccaa
gctatttttaatgcaaatttacgaacaacaacgaccacaacatcgggaaccttatatgac
gctctttctataggcatttgggctgccaatggattacctattaacaacacgctctctcaa
attaccgcgaatgttgccataggttctgcaattcccatagatgtccggacgtcgtctgat
gcatggtccgaagactccaacacagcatattatacatttggttcatacgaaactgcaaat
gttccctatctatggagaacttataacaattcttcaaacacatggaccgtcaggtcatca
ttcgatacgggtggaaacacgctattgaacaacttacaatattggatgatgagagcccct
gtgggaaacccagatacaggggcatgggtagcaaacataatttctataggtaacgcgttc
accccgtcatacttcatacgtcctggaggaatgacgtactcaggagaaggaaacctgtgg
ttcacggcgagtatttacaaaaacacatcatacacgggcaacacaagatttactttcgcc
ggaaatgctatcacgaccccgacgatcaacacgagtggtcttggttttgttggtttgtgg
aagatcttagattcaaatggttcatattctagtttaacgttgttgtcaaacacatccgaa
gtggcaaatactagtaaatacacggcatgtacatcgggattccaaacgatatccgtgggt
agaaacgtggcaaaaggaacaggagtcgtgaagatccaatgcattagtaacatttctaac
atatcttttataacaccagctggcaacgtattctgccaaggactcacgaaccccagcaac
acaagactcataagttttgatgtatatcctaacctttcgataaatggtttcaatgctctg
agcaatatagtggctgcaaacgcatccgttggcgacaacctgcagtttggaaatgcaata
gattataactattctctcaatacattgaccactaactttgcaagactgaacattgacggc
atcgtgtaa
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integrated database retrieval system
