Viruses: 41901161
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Entry
41901161 CDS
T40000
Symbol
P1192R, F8207_gp117
Name
(RefSeq) African swine fever virus; topoisomerase II
KO
K26426
Asfivirus DNA topoisomerase II [EC:
5.6.2.2
]
Virus
10497
African swine fever virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
Vog
Vog cluster
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
HATPase_c
DNA_gyraseB
Motif
Other DBs
NCBI-GeneID:
41901161
NCBI-ProteinID:
YP_009702359
RS:
NC_044941
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All DBs
Position
NC_044941:142258..145836
Genome browser
AA seq
1192 aa
AA seq
DB search
MEAFEISDFKEHAKKKSMWAGALNKVTISGLMGVFTEDEDLMALPIHRDHCPALLKIFDE
LIVNATDHERACHSKTKKVTYIKISFDKGVFSCENDGPGIPIAKHEQASLIAKRDVYVPE
VASCFFLAGTNINKAKDCIKGGTNGVGLKLAMVHSQWAILTTADGAQKYVQQINQRLDII
EPPTITPSREMFTRIELMPVYQELGYAEPLSETEQADLSAWIYLRACQCAAYVGKGTTIY
YNDKPCRTGSVMALAKMYTLLSAPNSTIHTATIKADAKPYSLHPLQVAAVVSPKFKKFEH
VSIINGVNCVKGEHVTFLKKTINEMVIKKFQQTIKDKNRKTTLRDSCSNIFVVIVGSIPG
IEWTGQRKDELSIAENVFKTHYSIPSSFLTSMTRSIVDILLQSISKKDNHKQVDVDKYTR
ARNAGGKRAQDCMLLAAEGDSALSLLRTGLTLGKSNPSGPSFDFCGMISLGGVIMNACKK
VTNITTDSGETIMVRNEQLTNNKVLQGIVQVLGLDFNCHYKTQEERAKLRYGCIVACVDQ
DLDGCGKILGLLLAYFHLFWPQLIIHGFVKRLLTPLIRVYEKGKTMPVEFYYEQEFDAWA
KKQTSLVNHTVKYYKGLAAHDTHEVKSMFKHFDNMVYTFTLDDSAKELFHIYFGGESELR
KRELCTGVVPLTETQTQSIHSVRRIPCSLHLQVDTKAYKLDAIERQIPNFLDGMTRARRK
ILAGGVKCFASNNRERKVFQFGGYVADHMFYHHGDMSLNTSIIKAAQYYPGSSHLYPVFI
GIGSFGSRHLGGKDAGSPRYISVQLASEFIKTMFPAEDSWLLPYVFEDGQRAEPEYYVPV
LPLAIMEYGANPSEGWKYTTWARQLEDILALVRAYVDKDNPKHELLHYAIKHKITILPLR
PSNYNFKGHLKRFGQYYYSYGTYDISEQRNIITITELPLRVPTVAYIESIKKSSNRMTFI
EEIIDYSSSETIEILVKLKPNSLNRIVEEFKETEEQDSIENFLRLRNCLHSHLNFVKPKG
GIIEFNSYYEILYAWLPYRRELYQKRLMREHAVLKLRIIMETAIVRYINESAELNLSHYE
DEKEASRILSEHGFPPLNHTLIISPEFASIEELNQKALQGCYTYILSLQARELLIAAKTR
RVEKIKKMQARLDKVEQLLQESPFPGASVWLEEIDAVEKAIIKGRNTQWKFH
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgtttgaaatcagcgatttcaaagagcatgcgaagaaaaaaagcatgtgggct
ggcgccctcaacaaagtcactatttcgggtcttatgggggtctttaccgaagatgaggac
cttatggcgttacccattcacagagaccactgtcccgctttgttaaaaatttttgacgag
ctcatcgtaaatgccacggatcatgaaagagcttgccatagcaaaacaaaaaaggtaacc
tacatcaaaatttcgtttgataaaggcgtgttttcttgcgaaaacgatggcccgggaatc
cccattgcaaagcatgagcaggccagtcttatcgccaagcgcgatgtgtatgttcccgag
gtggcttcatgcttctttctagccggaacgaacatcaataaggccaaggactgtatcaag
gggggaaccaacggcgtcgggctgaagctcgccatggtgcattcgcagtgggccattctt
accaccgccgacggcgcgcaaaagtatgttcaacaaatcaaccagcgcctagatatcatt
gagcctcctaccattacaccctccagggaaatgtttacacgtatcgagctcatgcccgta
taccaggaactagggtacgcggagcctctgtctgaaacggagcaagcagatctttccgcc
tggatttatcttcgcgcctgccaatgcgcggcctacgtgggaaaaggcaccaccatttat
tacaatgataagccttgccgcacgggctctgtgatggcgctggccaaaatgtacaccctg
ttgagcgcgcctaatagcacgatacatacggcgaccattaaggccgacgcaaaaccctat
agcctgcaccctctgcaggttgcggcggtcgtgtcccccaagtttaaaaaatttgaacac
gtgtccattatcaacggggtaaattgtgtaaaaggagaacatgttacctttttgaaaaag
accattaatgaaatggtcattaaaaaatttcaacagacgattaaagataaaaaccgcaaa
acaacattacgtgacagctgttcaaacatctttgtcgttatagtgggttccattccaggc
atagaatggaccggccagcggaaggatgaacttagcatcgcagaaaatgtttttaaaacg
cattactccatcccttctagttttttaacaagcatgacaaggtctatcgtggatattctt
ctgcaatccatttctaaaaaagataaccataaacaggtcgacgtagacaaatatacgcgt
gcccgcaatgcgggagggaaaagggcgcaggactgcatgctactcgcggcggaaggggat
agcgcactttccctgttgcgcacgggactgaccctgggaaagtccaacccaagcgggccc
tcctttgacttctgcggcatgatctccctgggaggggtcatcatgaatgcctgcaaaaag
gtgacaaacattacaacggactctggagaaaccatcatggtgcgcaacgaacagcttacc
aataataaagtgttgcagggaattgtgcaggtattgggtctagacttcaactgccattac
aaaacgcaggaagagcgagcaaagctgagatacggctgcattgttgcgtgcgttgatcaa
gatctggatgggtgtggaaaaatccttggactgctgctggcctactttcacctgttttgg
cctcagcttattatccatggtttcgtaaaacgactgcttaccccgctgatacgtgtgtac
gaaaagggcaagactatgcccgtagaattttactatgaacaggagtttgatgcctgggca
aaaaagcagaccagcttagtcaatcatactgtaaaatattacaagggattggcggcgcat
gacacccatgaagtaaaaagcatgttcaaacattttgacaacatggtgtacacgtttacc
ctggatgactcggcaaaggagttgtttcatatttattttggcggggagtcggagttgcga
aaaagagagctttgcaccggcgtggtgccgctcactgaaacccagacgcagtccattcat
agtgtccgacgaattccttgcagcctgcatctgcaggtagataccaaggcttacaagctg
gatgccatcgagcggcagattcccaacttcttagacggaatgacgcgggcgcggcgcaaa
attttagccgggggggtgaaatgcttcgcttccaacaaccgtgaacgaaaggtttttcag
ttcgggggctacgttgcggatcacatgttttatcaccatggcgacatgtcgttaaacaca
agtattataaaagccgcccagtattacccgggctcctcccacctctatccagtattcata
ggcataggaagcttcggctccaggcacctgggaggaaaggatgcaggatccccaagatac
atcagtgtgcagcttgcgtctgaatttattaaaacaatgttccccgcggaggactcatgg
cttctcccctacgtctttgaggacggccagcgggcggaaccagagtactacgtgcctgta
ttgccgcttgctattatggagtacggcgccaacccatcggagggctggaagtacaccact
tgggcccggcaactggaagacattttggccttggtgagggcctacgtcgacaaagacaac
ccaaaacacgagctactgcactatgcaataaaacataagattactatactcccgctgcgg
ccctccaattacaatttcaagggccatttgaagcggtttggccaatactactacagctac
ggcacgtacgacatctcagagcagcgaaatataattactattacggagcttcctctgcgt
gttcctacggttgcatatatcgaaagtataaaaaaatcgagtaaccgcatgacatttatt
gaagaaatcatcgactacagtagttcagaaaccattgaaattctggtgaaactaaagcca
aatagtctcaaccgtatcgtggaagaatttaaggagactgaagagcaagattccatagaa
aattttctgcgcctgcgcaattgtttacattcgcatctaaactttgtaaaacctaaaggt
ggtattatcgagtttaactcatattatgaaattttatatgcgtggctaccttacaggcgt
gagctttaccaaaagcgtcttatgcgtgagcacgcggtgcttaagctgcgcattatcatg
gaaactgctattgtacgctacatcaatgagtctgcagagctaaatctttcccattatgag
gatgaaaaggaggcaagccgcattctaagcgagcatggatttcccccgctgaaccacacg
ctgatcatttcccctgagtttgcctctatagaggaactcaatcaaaaagcgctgcagggc
tgttatacctatatactatctttgcaggctcgagaattgcttatcgcagccaaaactcgt
cgggtggaaaaaataaaaaaaatgcaagctcgtcttgataaggttgagcagcttttgcag
gagtctccctttcccggcgccagcgtatggctggaggaaattgatgcggtggaaaaggct
attataaaaggaagaaatactcagtggaaatttcattaa
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