Viruses: 41901758
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Entry
41901758 CDS
T40000
Symbol
F8212_gp060
Name
(RefSeq) African swine fever virus; BA71V-EP1242L
KO
K26373
Asfivirus DNA-directed RNA polymerase RPB2 [EC:
2.7.7.6
]
Virus
10497
African swine fever virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
Vog
Vog cluster
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_5
C1_2
Motif
Other DBs
NCBI-GeneID:
41901758
NCBI-ProteinID:
YP_009702952
RS:
NC_044946
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All DBs
Position
NC_044946:complement(62979..66707)
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AA seq
1242 aa
AA seq
DB search
MEPLRPQITYGPIETVDNEELTEADMLSFISAAVNSTGLIGYNIKSFDDLMDNGIPQIVK
QMFNVDITYKDQRDHTEIDKLRESVQIQFNFTDVNIERPQHRNYSQGNKINLLPNKARLC
GLSYSGPVKLAAEVILTAHYSNGRQEVKRASIPPFQVSTFPIMRGSNRCHTHDLSKTAKK
EIGEDPNEPGGYFIARGGEWVVDLLENIRFNTLHIHYHTMQQGNNEIIRGEFISQPGGAF
ENSSQIIIRYMTTGAITIEINSTKFSKLRIPWYLIFRMFGMTGDDSIIEQVVFDLESNSP
VNTFMVEILEKSIHVSDPIFQPVQHELNREKIIQFLSEKVSKFVSNPSAYKSDENAVQYL
NERQLTILDKILLPHMGQTADTRVRKLRFLGLLIHKILLVIMNVFPPTDRDSYRTKRVHG
SGVSLAKAFKAIFNTSVIAPIINGFKELLKQTAFEELTQRNIIEAFSAALSKNTASDLNR
SMEQSIISGNKTIMVRQRPIVNRVSTQSLERKNLLNTISALRTVNTHSTTNASKQTERAD
MMRRVHASYPGYICVAQSADTGEKVGMSKQLAITANVCTAGEVLSLKQRLLSDPAIQQLA
DVSNKDIVRKGLARVFINGEWIGCCTNAFELAQRYRMFRREGKIVHPHTTIYWDSMVDEV
EFWLDVGRLTRPLLIVDNNIEKYNEACYKAAEARKKGDKDWEKHKISFVQNTRFTSQMAK
AILAGTLTLEDLVAQGICEFITPEEAENCLVAFSITELRKHKHDVTRRFTHVDVPQAILG
LAALVSPYANCTQPARVTYETNQGRQTGGWYCFSWPYRVDMNRFFQFYNEMPLVKTIAHN
YVIPNGLNTIVAYMIYGGYNQEDSVIVSQSFIDRGGFAGTFYREEKVELESDIESFGKPD
PLITKNLKPGANYEKLVDGFVPVGTVVKKGDIIIGKVAKIRGEKDELNKYIDRSVMYGFD
EPAVVDAVMRPHGPNDEIFGLMRLRYERNLNIGDKMSSRSGNKGIAALALPTSDMPFTED
GLQPDLIVNPHSHPSRMTNGQMIETTVGLANALQGVVTDGTAFLPINVQLLSERLAQEGL
RFNGCQKMFNGQTGEYFDAAIFIGPTYHQRLQKFVLDDRYAVASYGPTDALTGQPLDGKR
SHGGLRLGEMEHWVLTAQGAMQTIIEKSHDDSDGCISYICRNCGEPAIYNASHPIYKCMN
CDVQADISMVDSRRSSIVFQHEMRAANVNITSVLSPRVFQPA
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atggaacccttgcggccgcaaataacctacggccccattgaaaccgtggataatgaggag
cttacagaggctgatatgctgagctttatctccgccgcagtaaactctactgggttgata
ggatataacatcaaaagcttcgatgatcttatggacaatggaattccgcaaattgtaaaa
caaatgttcaacgtagatattacctataaggaccaacgcgaccatactgaaatagataag
cttcgggaatctgttcagatccaatttaactttaccgatgtgaacattgaacgcccgcaa
caccgaaactattcacagggaaacaagataaatttactgcccaataaggcacgcctgtgt
ggtctttcctattcaggccctgttaaactggccgccgaggttattttaacggcgcattat
agcaatggccggcaggaggtgaaacgagcaagcattcctccttttcaggtatctacattt
cccatcatgcggggcagtaatcgctgccacacgcatgacctatccaaaactgcaaaaaaa
gaaataggagaagaccctaatgaacccggcggttactttatagcccgagggggggaatgg
gtcgtggaccttttggaaaacatccgctttaacacgcttcacatccattaccataccatg
cagcaaggaaacaatgaaatcattcgcggcgagtttatctcgcaaccaggaggtgccttt
gaaaatagctctcaaatcattatacgctacatgactaccggcgctattaccattgaaatc
aatagcaccaagttctcaaagcttcgcataccctggtacctcatctttcgcatgtttggg
atgacaggcgatgacagcatcattgagcaagtggtattcgatctagaatccaactcccct
gtaaataccttcatggtagaaatcttggaaaaatccattcatgtttcagaccctatattt
cagccggtccaacacgagctgaaccgggaaaaaattatccagtttttatccgagaaggtt
tctaaatttgtctccaacccgtctgcttacaaaagcgatgaaaacgcggtacaatacttg
aatgaaagacagcttactattttagacaaaatattgctgccacacatgggccaaaccgca
gatacacgtgtacgaaagctgcgctttttaggcctgcttattcataaaatacttcttgtc
attatgaacgtatttccgcccacggaccgcgatagctaccgcaccaagcgggtgcacggc
tcaggggtttcgcttgccaaagcttttaaagctatctttaacacatccgttatagcaccc
atcatcaatgggttcaaagaacttcttaaacaaacagcctttgaggagctgacccagcga
aacattatcgaggcgttttctgccgctttatcaaaaaacaccgcctccgatctcaaccgc
agtatggaacagtctatcatttcaggaaataaaaccatcatggtgcggcagcgccctatt
gtaaacagagtatctacccaaagcttggaaagaaaaaatttgttaaatactatttcagcg
ttgcgtacggtaaatacccatagcaccaccaacgcatccaaacaaacggaaagagctgac
atgatgcgtcgcgtgcatgcatcctacccaggatacatctgcgtagcccagtcagccgat
actggcgaaaaagtaggcatgtccaaacaattagccatcaccgccaatgtctgcactgcc
ggggaagtactttcgttaaaacaacgcctcctatcagatccggccattcaacagttagcc
gatgtttctaacaaggacattgtacgaaagggtctagcacgcgtatttatcaacggagag
tggatcggctgctgtaccaacgcctttgagcttgctcagcggtatagaatgtttcgccgt
gaaggcaagatcgtacatccccataccaccatctactgggatagcatggtagatgaagta
gaattctggttggacgtcggcaggctgacccgccctctgctcattgtagataataacatt
gaaaaatataatgaggcttgctacaaggctgcagaggccagaaaaaaaggcgataaagac
tgggaaaaacataaaatatctttcgttcaaaatacgcgatttacgtctcaaatggcaaaa
gctattttagccggaacgcttacacttgaagatctcgtagcgcagggcatctgtgagttc
attacccctgaggaggcagaaaattgtcttgtcgccttctccattactgaactgcgcaag
cacaaacacgatgtgacgcgtcgcttcacgcacgtagacgtacctcaagccattttgggc
cttgccgccctcgtctctccctacgcaaactgcacccaacctgcgcgtgttacctatgaa
acaaaccaaggccgacaaaccgggggctggtattgctttagttggccatatcgtgtagat
atgaaccgcttcttccagttttacaatgaaatgccgcttgtaaagaccatagcacataac
tatgtcattcctaacgggctaaataccattgtggcctatatgatctacggcggttacaat
caggaggactctgtgatcgtgtcacagtcctttattgacaggggcggctttgccggcacc
ttctaccgagaagaaaaagtagaattagaaagcgacatagagtcgtttggaaagcccgat
cccttaatcaccaaaaatcttaagcccggtgccaattatgaaaagcttgtagatggattc
gtgcccgtaggaacggtggtcaaaaaaggcgacatcatcataggaaaagtggccaaaata
cggggcgaaaaagacgaactcaacaaatacatcgatcggtctgtcatgtacggcttcgat
gagccggccgtcgtagatgctgtgatgcgtccccatggacccaatgacgagatcttcggc
ctcatgcgtctgcgctatgaaagaaatctcaatattggtgacaagatgagttctcgcagc
gggaacaagggcattgcggcgctggccttgcccacctcagatatgcctttcacagaggac
ggactgcagcccgacctcattgtaaacccacattcacatccctcccgaatgaccaatggt
caaatgatagaaacgacggttggtctagcaaatgctctacagggagtagtaacagacggc
accgcatttctgcccattaatgtgcagcttctttcagaaagactggcgcaagaaggttta
cgcttcaatggatgccaaaaaatgttcaacggccagaccggtgagtactttgacgcggcc
atcttcataggaccaacctaccaccagcgcctgcaaaaatttgtgctggatgatcggtac
gccgttgcaagctatgggcccacggatgccctcacaggccagccgttggacggcaaacga
tcgcacggaggtcttcgcctgggagagatggagcattgggtgcttacggcgcagggcgcc
atgcaaaccatcatagaaaaatcgcacgatgactcggatggctgcatctcctacatctgt
agaaactgtggcgagcctgccatctataacgcgagtcatcccatctacaagtgcatgaac
tgcgatgtccaggccgatatcagcatggtggatagccgtcgttcctccatcgtatttcaa
cacgaaatgcgagcggccaacgttaatattacatccgtactttcaccaagagtatttcag
ccggcttaa
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