Viruses: 41902104
Help
Entry
41902104 CDS
T40000
Symbol
F8221_gp079
Name
(RefSeq) African swine fever virus; pEP1242L
KO
K26373
Asfivirus DNA-directed RNA polymerase RPB2 [EC:
2.7.7.6
]
Virus
10497
African swine fever virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
Vog
Vog cluster
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
41902104
NCBI-ProteinID:
YP_009703296
RS:
NC_044955
LinkDB
All DBs
Position
NC_044955:complement(62052..65780)
Genome browser
AA seq
1242 aa
AA seq
DB search
MEPLRPQITYGPIETVDNEELTEADMLSFISAAVNSTGLIGYNIKSFDDLMDNGIPQIVK
QMFNVDITYKDQRDHTEIDKLRESVQIQFNFTDVNIERPQHRNYSQGNKINLLPNKARLC
GLSYSGPVNLAAEVILTAHYSNGRQEVKRASIPPFQVSTFPIMRGSNRCHTHHLSKTAKK
EIGEDPNEPGGYFIARGGEWVVDLLENIRFNTLHIHYHTMQQGNNEIIRGEFISQPGGAF
ENSSQIIIRYMTTGAITIEINSTKFSKLRIPWYLIFRMFGMTGDDSIIEQVVFDLESNSP
VNTFMIEILEKSIHVLDPIFQPVQHELNREKIIQFLSEKVSKFVSNPSAYKSDENAVQYL
NERQLTILDKILLPHMGQTADTRVRKLRFLGLLIHKILLVIMNVFPPTDRDSYRTKRVHG
SGVSLAKAFKAIFNTSVIAPIINGFKELLKQTAFEELTQRNIIEAFSAALSKNTASDLNR
SMEQSIISGNKTIMVRQRPIVNRVSTQSLERKNLLNTISALRTVNTHNTTNASKQTERAD
MMRRVHASYPGYICVAQSADTGEKVGMSKQLAITANVCTAGEVLSLKQRLLSDPAIQQLA
DVSNKDIVRKGLARVFINGEWIGCCTNAFELAQRYRMFRREGKIVHPHTTIYWDSMVDEV
EFWLDVGRLTRPLLIVDNNIEKYNQACYKAAEARKKGDKDWEKHKIPFIQNTRFTSQMAK
DILAGTLTLEDLVAQGICEFITPEEAENCLVAFSIIELRKHKHDVTRRFTHVDVPQAILG
LAALVSPYANCTQPARVTYETNQGRQTGGWYCFSWPYRVDMNRFFQFYNEMPLVKTIAHN
YVIPNGLNTIVAYMIYGGYNQEDSVIVSQSFIDRGGFAGTFYREEKVELESDIESFGKPD
PLITKNLKPGANYEKLVDGFVPVGTVVKKGDIIIGKVAKIRGEKDELNKYIDRSVMYGFD
EPAVVDAVMRPHGPNDEIFGLMRLRYERNLNIGDKMSSRSGNKGIAALALPTSDMPFTED
GLQPDLIVNPHSHPSRMTNGQMIETTVGLANALQGVVTDGTAFLPINVQLLSERLAQEGL
RFNGCQKMFNGQTGEYFDAAIFIGPTYHQRLQKFVLDDRYAVASYGPTDALTGQPLDGKR
SHGGLRLGEMEHWVLTAQGAMQTIIEKSHDDSDGCISYICRNCGEPAIYNASHPIYKCMN
CDVQADIGMVDSRRSSIVFQHEMQAANVNITSVLSPRVFQPA
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atggaacccttgcggccgcaaataacctacggccccattgaaaccgtggataatgaggag
cttacagaggctgatatgctgagctttatctccgctgcagtaaactctacaggattgata
gggtataacatcaaaagcttcgacgatcttatggacaatggaatcccgcaaattgtaaaa
caaatgtttaacgtggatattacttataaagaccaacgcgaccatactgaaatagataag
cttcgggaatcggttcagatccaatttaactttacagatgtgaacattgaacgcccgcaa
catcgaaactattcacagggaaacaagataaatttactacctaataaggcacgcctgtgt
ggcctttcctattcgggccctgttaatctagccgccgaggttattttaacggcgcactac
agcaatggtcggcaggaggtaaaacgagcaagtattcctccatttcaggtgtccacattt
cccatcatgcggggcagcaaccgctgccacactcatcacctatcaaaaaccgcaaaaaaa
gaaataggagaagaccctaatgaacccggcggctactttatagcccgaggcggggaatgg
gtcgtagacctcttagaaaacatccgctttaacacgcttcacatccattatcataccatg
caacaagggaataatgaaatcattcgcggcgagtttatctctcaaccaggaggtgccttc
gaaaatagctctcaaattattatacgctacatgactactggtgccattaccattgaaatc
aatagcaccaagttctcaaaacttcgcataccttggtatctcatctttcgcatgtttgga
atgacaggcgatgacagcatcattgagcaagtggtattcgatctggaatccaactcccct
gtgaataccttcatgatagaaattctggaaaaatccattcatgttttagaccccatattt
caaccggtccaacacgagctgaaccgagaaaaaattatccagtttttatctgagaaggtt
tccaaatttgtctcaaacccatctgcttacaaaagcgatgaaaatgcggtacaatacttg
aatgaaagacaacttactattttagacaaaatattgttgccacacatgggccaaaccgca
gatacacgtgtacgaaaactgcgctttttaggcctgcttattcataaaatacttcttgtc
attatgaatgtgtttccacccacggaccgtgatagctaccgcaccaagcgggtgcacggc
tcaggggtctcgcttgctaaggcctttaaggctatttttaatacatccgtgatagcaccc
atcatcaatgggttcaaagaacttcttaaacaaacagcttttgaggagctaacccagcga
aacattatcgaggcattttctgccgctttatcaaaaaataccgcctccgatctcaatcgc
agtatggaacagtctatcatttcaggaaataaaaccatcatggtgcgacagcgccccatt
gtaaacagagtatctactcaaagtttggaaagaaaaaatttattaaatacgatttcagcg
ttgcgtacggtaaatactcataacaccaccaacgcatccaaacaaacagaaagggctgac
atgatgcgtcgcgtgcacgcatcttatcctggatacatctgcgtagcccagtcagccgat
actggtgaaaaagtaggtatgtctaaacagttagccattaccgccaatgtctgtaccgct
ggagaagtactttcgttaaaacaacgccttctatcagatccggccattcaacagttagcc
gatgtttccaacaaggacattgtacgaaagggcctagcgcgcgtatttatcaacggagaa
tggattggctgctgcaccaacgcctttgagcttgctcagcggtatagaatgtttcgccgt
gagggcaagattgtgcatccccataccaccatctactgggatagcatggtagacgaagta
gaattctggttggacgtcggtaggctgacccgccccctgctcattgtagataataatatt
gaaaaatacaatcaagcctgttacaaggccgcagaggccagaaaaaaaggcgataaagac
tgggaaaaacataaaatccctttcattcaaaatacgcgatttacgtctcaaatggcaaaa
gacattttagccggaacacttacacttgaagatctcgtagcgcagggcatctgtgaattc
attacccccgaagaagcggaaaactgtcttgttgccttctctatcatcgagctacgcaag
cacaaacatgatgtaacacgtcgtttcacacacgtggacgtgccccaagctattttgggc
cttgccgccctagtgtccccctacgcaaactgtacccaacctgctcgtgttacttatgaa
acaaatcagggtaggcagacggggggttggtactgcttcagctggccatatcgtgtagac
atgaaccgtttcttccagttttacaatgaaatgccgcttgtaaagaccatagcacataac
tatgtcatacccaacgggcttaataccattgtggcctatatgatctacggcggctacaat
caggaggactctgtgatcgtgtcgcagtcctttattgacaggggcggctttgccggcacc
ttctaccgagaagaaaaagtagaattagaaagcgatatagagtcgtttgggaagcccgac
cctttaatcaccaaaaatcttaagccgggtgctaattacgaaaagcttgtagatgggttt
gtgcccgtgggaacggtggtcaaaaagggcgacatcattataggaaaagtggccaaaata
cggggcgaaaaagacgaactcaacaaatacatcgaccggtctgtcatgtacggcttcgat
gagccggccgtcgtggatgctgtgatgcgtccccatgggcccaatgacgagatctttggc
ctcatgcgcctgcgctatgaaagaaatctcaatataggcgacaagatgagttctcgcagc
gggaacaagggcattgcggcgctggccctgcccacctcagacatgcccttcacagaggac
ggactgcagcccgatctcattgtaaacccccactcacatccctcccgaatgaccaacggt
caaatgatagaaaccacggttggtctagcaaatgccctacagggggtggtaacagacggc
accgcattcctgcctattaacgtgcagcttctttcagaaagactggcgcaagaaggtcta
cgcttcaatggatgccaaaaaatgttcaacggccagaccggcgagtactttgatgcggcc
atcttcataggaccgacctatcaccagcgcctgcaaaaatttgtgctggatgaccgatac
gccgttgcaagctatgggcccacggatgccctcacaggccagccgttggacggcaaacga
tcgcacggaggtcttcgtctgggagaaatggagcattgggtgcttacggcgcagggcgcc
atgcaaaccatcatagaaaaatcgcacgacgactcggatggctgcatctcctacatctgt
agaaactgtggcgagcctgccatctataacgcgagtcatcccatctacaagtgcatgaac
tgtgatgtccaggccgatatcggcatggtagatagccgtcgctcctccatcgtatttcaa
cacgaaatgcaggcggccaatgttaatattacatccgtgctttcaccaagagtatttcaa
ccggcttaa
DBGET
integrated database retrieval system
