Viruses: 4191997 Help Entry 4191997           CDS       T40000                                  Symbol CMVX_gp1 Name (RefSeq) Malva mosaic virus; ORF 1   KO K26615   Alphaflexiviridae RNA-directed RNA polymerase Virus 392174  Malva mosaic virus Taxonomy SSDB OrthologParalogGFITVOGVOG cluster Motif Pfam:  Vmethyltransf Viral_helicase1 2OG-FeII_Oxy_2 RdRP_2 AAA_22 AAA_19 Motif Other DBs NCBI-GeneID:  4191997 NCBI-ProteinID:  YP_667844 RS:  NC_008251 UniProt:  Q0Z8V5 LinkDB All DBs Position NC_008251:82..4797 Genome browser AA seq 1571 aa AA seqDB search MAKVRASLERIRDPSVQTALSEAAYTHVRPVLKEALVNCPYALTDAEADCLENFGITINP YATQTHTHAACKAIENRMLEIVGKHLPKEKVTMLFLKKSKLRYLRRAAALNDVFINKDME PKDLFRYDRDTIRNSLQNVDTSLAYMSDTLHFMNFNSVAQLFVDSPKLTTLLATVVLPVE ALHRRSSLYPALYSINYHPQGFEYIPGNHGGGAYFHPYDTLDWLKVRKILAKDFYHLDEK FTLTFQMVESIGANHLFIIHKADMITPGMRTFCRDSLVTLPKIFCPDSMNANRPLSKTKA MQLMLYCKSVKQVTERDIYAKFRQIIPTIELELYEPDEIIHLCNYLNFMTQLSSITSYED LLGNSLWRRLTQPIKAQVKKFLDFFRGQDDFTKLLGVLKWEAFSYSLCPSDFHATFISKS AQDFATSQEVPIDEAVETIRHCRNNPNFVSLDDFEVSSLPDFLSPPAQMEDFSTDESVDD TPTCPTTNLPNQDVPEEHQVVIHNSDWQVDTILPIIRNLPYTQLKGRKCYFLTTSPDIDY GHDSVSYQACPWDEVLSDILLTTGQRANACLIQVYEQDAKIPLHRDDEKVYAGHPILTMN FGQASFSFSNGETFELTDGQWFVMSGKYLTQYKHAAFAKSVGRISLTFRTHVKTLAGHPI SSRSLEPTLNDVVEPEEATKNDVSDAPEVPKSFRNPLSSQASEPIPSTTDSLPWNAWKPL LKEHGFEGDQQQLDSSGFMILPITDIKKVPHVPYPSEVPEALQKALIAIKRYPVAITLDH KRAGSYASDIKNSRTGKLLAQKDDKWKAAFAYKMQHEDHVVVGTVIHGCGGSGKSHTLQN WMRTLKADQSDVTVVTPTILLRNDWSTKLPILPAETFKTFEKAIVQPCNPVVIFDDYTKL PPGIIEALVMHHRNVSFIILTGDSRQSVYHEMNPEAYISALPEAVEVFEPYCEFYVNASH RNVKQLANKLGVYSEREGKLKVNFASHHLKASRTPILVPSTMKRNAMADMGHHSMTYAGC QGLTAPKVQILLDNHTQFCSDRVLYTCLSRAVDTIHFINTGPTTGDYWTKLESTPYLKAF IDTYRDEKTELYNSSPADDSPTEPEAPKTHFPVAPKPLLEPLVAELADKESREIFSRSTG YSNTIQTNDPVVQLFQHQQAKDETLYWATIEARLSISTPEENLREFKMKADVGDILFMNY AKLMQLPAEPVPFEERLWEISAAEVRNTYLSKPIGNLVNAATRQSPDFPANKIALFLKSQ WVKKVEKLGAIKVKPGQTIASFHARNGDVVRYDARYIRKMRARFQPDNIFINCEATPEDL NKFVKTKWHFNRPAHTNDFTAFDQSQDGAMLQFEVMKAKFFNIPADIIEGYIYIKLNAVI FLGTLGIMRLSGEGPTFDANTECSIAYNATRFHIEDDTAQVYAGDDMALDRISTEKSSFA KLAHQLKLTSKPQFPRQVRGDYAEFCGWVLTPAGILKHSLKMQASIQLQKKINNIAQSAR SYALDLRYAYQMGMNYRSTSLKKKQISTSSLSETCICCTRRTCWLTAVLAHPETLSCLSY AVPRQHKNATI NT seq 4716 nt NT seq  +upstreamnt  +downstreamnt atggcaaaagttagagcgtcgttggaaaggattagagacccatcagtccaaactgcactc tcggaggcagcttacactcatgtccgtcctgtcctaaaagaagccttggtcaattgccct tatgcactgaccgacgcggaagcagattgtttagaaaattttggtattacaataaaccca tacgccactcaaacccacactcacgcagcttgtaaagcaatagagaatagaatgttagag atagtaggcaagcacttgcccaaagagaaagttaccatgctcttcctaaagaaaagtaaa ttaaggtatctgcgcagagccgctgccctaaatgacgttttcattaacaaagacatggaa ccaaaagacctctttaggtatgatagagatacaataagaaatagtcttcaaaatgtagac actagtttagcttacatgtctgacacactacatttcatgaactttaactcagtagctcag ctctttgtggattctccaaaattgaccactttattggcaacagtagtgttaccagtagaa gcgctacatcgcagatcgtctctatatccagcgttatattcaatcaactaccacccacaa gggtttgaatatattcctgggaaccatggaggaggggcttactttcacccatatgacacc ttagattggctgaaagtccgcaagatccttgcaaaagacttttatcatcttgatgagaaa tttactttaacattccagatggtagaaagcatcggggccaatcacctcttcatcattcac aaagccgacatgataactcccggcatgagaacattctgcagagactctctggtgacttta ccaaaaatcttttgccctgattcgatgaacgctaacagacctttatcgaaaaccaaagct atgcaattgatgttgtattgcaaatctgttaagcaagttacggagagagacatctatgct aaattccgacaaattattcctaccatagagttggaactgtatgaaccagacgagataatt cacctttgcaactatctcaacttcatgactcaactcagttctataacctcctacgaagat ttgttgggtaacagtttatggcgtagactcactcagccaatcaaggctcaggttaaaaaa tttttggacttcttccgcggtcaagatgatttcaccaaattgctcggcgtactaaaatgg gaagcttttagctactccctgtgtccctccgattttcacgccactttcatcagcaaatct gctcaagattttgcgacatcacaagaagtccccattgacgaagctgttgagacaatacga cattgtcgcaataatcccaactttgtcagtctggatgattttgaagtgtcgagtctacca gattttttatctcccccagcccaaatggaggacttttctacagatgaaagtgtggatgac acaccgacgtgcccgacaaccaaccttcctaaccaggacgttccggaagaacatcaagtg gtgatccacaacagcgattggcaggtagacacaatattgcctatcatacgcaacctacca tacacacaactgaagggtcgaaaatgttactttttgaccacctcacccgacatagattat gggcacgactctgttagctaccaagcttgtccttgggatgaagttcttagtgacatcttg ctaactacaggacaaagagcaaatgcatgcctcatccaggtttacgagcaagatgccaaa ataccattacacagagatgatgagaaagtttacgcagggcatcccattctaactatgaac tttggccaggcatctttctcgttttccaatggagaaacttttgaactaacagacggtcag tggttcgtcatgagtggcaagtacttgacacagtataaacatgcagcttttgctaagtct gtcggaaggatatccctgaccttccgaacacatgttaagacactggcaggccaccccatt tcgagtcgtagccttgaacctacgctgaatgacgtagttgaaccggaagaggctactaag aacgatgtctcagatgctcctgaagtgccaaaatcttttagaaatccactgagttcacaa gcatcggagccaatcccgtcaaccactgactcacttccctggaatgcttggaagccttta ctcaaggaacatggcttcgaaggcgatcaacagcagctggactcatctgggttcatgatt ttgcccattacggacatcaagaaagtgccacatgtaccctaccccagtgaagtgccagaa gctttacagaaagctttgatagccatcaaacgctaccccgtggctataactctagaccac aagagagcgggttcttatgcttctgacatcaagaatagccggacagggaaactgttagca caaaaagatgataaatggaaagcagcatttgcttacaagatgcagcacgaagaccatgtg gtggtcggtacagtcatacacggttgtggaggatcagggaaatctcataccctacaaaac tggatgaggactttgaaggcagaccagagtgatgtaactgtagtcacaccaaccattttg ttacgaaatgattggagcactaagttacccatcttgccagcagaaaccttcaaaactttt gagaaagccattgtgcagccatgtaacccagtagtcatcttcgatgattacacgaagctt ccgcctggcatcattgaagcacttgtgatgcaccatcgtaatgtgagcttcattattcta actggagacagtaggcagtctgtgtaccatgaaatgaatcctgaggcttacatctccgct ttaccagaagctgttgaagtttttgagccttattgcgaattctacgtcaatgcctcacac aggaatgtaaaacagctggctaataaattaggcgtatattcggagagagaaggcaaattg aaagtcaatttcgcctcccatcatttgaaagcttccagaacccctattttggtgccatct actatgaaaaggaacgccatggctgacatgggccaccacagcatgacctatgcaggctgc caaggcctgactgccccaaaagtgcaaatcctcttagacaaccacacccaattttgttcc gacagggtgttgtatacctgcctttcccgagctgtggacacaattcatttcattaacaca ggtcccaccactggggattattggactaagctggaaagtactccatacctgaaagctttc atcgacacgtacagggacgagaaaacggaattgtacaacagctcacctgccgatgatagc ccaactgaaccagaggctccgaaaactcacttcccagttgccccaaaaccacttttggaa cctctggtggctgaactagctgataaagagagtagagaaattttttctcgcagcacaggg tattcaaacaccattcaaactaacgaccccgtggtgcagcttttccaacatcaacaggcg aaagacgagacattgtattgggcaactattgaagcccgactctctatctctacccccgag gagaaccttagagagttcaaaatgaaagctgatgttggggatattctcttcatgaattat gccaagctaatgcaactaccagcagaacccgtaccattcgaagaaaggctttgggagatc tcagcggcagaggtgcgcaatacctatctgagtaagccaataggaaatttggtgaatgca gctactaggcagagcccagatttccctgcgaacaaaattgcgctcttcctcaaatcccag tgggtcaagaaggttgaaaagctgggtgctataaaagtcaaacctggccagaccattgcc tcctttcatgcaagaaacggtgatgttgtacggtacgatgcaagatacatacgcaagatg agggcccggtttcagcccgataatatctttattaactgtgaagctacgcccgaagatcta aacaaatttgttaagaccaagtggcacttcaacagacctgcccacacaaatgatttcaca gcgtttgaccaatctcaagatggcgctatgctacaatttgaagttatgaaagccaagttc ttcaatataccagcagacattattgaaggatacatatacataaagctaaacgctgtgatt ttccttggcactttgggcatcatgaggctttcaggggagggacccactttcgatgccaac actgaatgttccattgcatataatgccaccagatttcatattgaagatgacacagcacaa gtgtatgcaggagacgatatggccttagatagaatcagcacagaaaagagcagttttgca aagctggcacatcaactcaaattgacgtccaaacctcaatttccaagacaggtccgtggg gattatgcagagttttgtggttgggtgttgactccagctgggattttgaagcattctctt aaaatgcaggcctcgatccaactccaaaagaagatcaacaacatagcacagagtgctagg tcttatgctttggatctgcgatatgcctatcaaatggggatgaattacaggagcacctca ctgaagaagaagcagatttccaccagcagtctatcagagacatgcatctgttgcaccagg aggacgtgttggttaacggcagtgctagcccacccagagacactgagttgcctaagctat gcggttccacggcaacacaaaaacgcaacaatttga

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