Viruses: 5075771
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Entry
5075771 CDS
T40000
Symbol
PDV_s2gp1
Name
(RefSeq) Prune dwarf virus; polymerase P2
KO
K26630
Ilarvirus RNA-directed RNA polymerase
Virus
33760
Prune dwarf virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
RdRP_2
RdRP_1
RdRP_3
Motif
Other DBs
NCBI-GeneID:
5075771
NCBI-ProteinID:
YP_611151
RS:
NC_008037
UniProt:
Q91NQ3
LinkDB
All DBs
Position
NC_008037:32..2398
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AA seq
788 aa
AA seq
DB search
MDSLLEFLLPSHDEDAIELVDTNSVKPSFSLSDSSGDVSPIYRSLCKFFGFLMIRDTVVR
PDKFTGEFITLPFVIDRLRMTFDLEDDYAFPVDDCSYDLELTDAQLDYAEVLQQQKDFFS
ESLGKVVVDYDFSLDSEDPSIKDVVKIPDEISEDFPQENVPAEIVADVPQIVSDDVEEQV
VAGELIPSCETVNENVCVEVKFPTHLAPKFLATHLPDVDRVILVDGDTVDGFDKLISRND
WFFLKKLLPNIPLPSDGDVLLSGIKPTSPGVLQFALDELFPYHNLVDDRFFQELVECNDI
ALELDDCSFDLSHFVSWDKGKSGVDSTLMTGQTSNRQSTFREVALSVKKRNMNVPILNTV
LNVEDVSNKIVNRFFETVVDINLLTTLPDVISIGEVNYFSDYLKGKAINDDELYVDPICL
VSMDKYRHMIKSQLKPVEDNSLMFERPLAATITFHDKGKVMSTSPIFLAAATRLFACLNE
KISIPSGKYHQLFSLDAERFDSVRFWKEVDFSKFDKSQQELHHEIQRKIFLRLGVPQEFV
NTWFTSHCRSHISDASGLRFSVNYQRRAGDACTYLGNTIVTLAALCYVYDLRSSNVAMVV
ASGDDSLIGSYSELDRSFEHLFSTLFNFEAKFPHNQPFICSKFLLTMPTKGGGKQVVAVP
NPAKLLIKLGVKSMTVDKFDDWFQSWLDLIHYFDDYYLIEVVCSMTSYRYIRRPSQFLVS
AISSLKSLFANKKKCKDFLFPGLRDKNPDLSMRLDTPIKIRDVTSKRTRGKKKMKENSHF
QIDGKVGG
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atggattccctacttgagtttttgctaccttcgcatgatgaagatgcaattgaattggtt
gatactaattcagttaagcctagcttcagtttgtctgattctagtggggatgtttctcct
atttacaggtcgttgtgcaaattttttggatttcttatgatccgagatactgttgtcaga
cctgataaatttactggtgagttcataacgttacctttcgttatagatcggttgagaatg
acattcgatttggaagatgattatgccttccctgtggatgattgttcatacgatctggaa
cttactgatgctcagcttgattacgctgaagttcttcaacaacagaaagatttcttttca
gaaagtcttggtaaggttgttgttgattatgacttttcccttgatagtgaagatccttct
atcaaggatgttgtaaaaatacccgatgaaatttcggaagattttcctcaagaaaatgta
ccagccgaaattgtggctgatgttccacaaattgttagtgatgacgtcgaagagcaagtc
gtagctggagaattgatacccagttgcgaaactgtcaatgagaatgtttgtgtggaagta
aaatttcccacacatcttgcccctaaattcctggcaacacatttaccggatgttgatagg
gttattcttgttgatggtgatactgttgatgggtttgataaactcatcagtagaaatgat
tggttcttcttgaagaagttattacccaacattccattaccttctgatggagatgtgttg
ttgtcgggaattaaaccgacttcacctggagttcttcaattcgctctcgacgagttgttt
ccctaccataacttggtagacgatagatttttccaagaattggtcgagtgtaatgatatt
gcacttgaacttgatgactgctctttcgacttgtcccattttgtttcgtgggacaaaggt
aagtctggagtggattccaccttaatgacaggtcagacttccaataggcaaagtaccttt
agagaggtggcactgtcggtgaaaaaaaggaacatgaacgttcctattctcaacactgta
ttgaatgtcgaagacgtcagtaacaaaattgtgaatagattcttcgaaactgtggttgat
atcaatttattgaccacattgccagacgttatttccattggtgaggttaattacttttct
gattatttgaaaggtaaagccatcaatgatgatgaattgtatgttgatcctatttgtctt
gtgtctatggataaatacagacacatgatcaaatcccaactcaaaccggttgaagataac
agtctgatgtttgagagacctttggcagctactattacctttcatgataaaggtaaagtt
atgtcaacatctcccattttcttggcggcagcaactcggttgtttgcttgtctaaatgaa
aagatttcaattcctagtgggaagtatcatcagttattctctctagatgctgaaagattt
gattcggtgcgtttctggaaggaagtggatttttcgaagttcgataaatctcaacaggaa
ttgcatcatgaaatccagagaaaaattttccttaggttgggagtccctcaggaatttgtt
aatacctggtttaccagtcattgtagatctcatatttctgatgcctctgggttaagattt
tcggtcaattaccagagaagagcgggagatgcttgtacctatttaggtaacactattgtc
actctcgcggccctttgttacgtttatgatctacgatcttcaaacgttgctatggtggtt
gcttctggtgacgacagtttgattgggagttattccgaattggacagaagttttgaacat
ttgttctctactttgttcaatttcgaagcaaaatttccacataatcaaccgtttatatgc
agtaagtttttacttactatgcccacgaaaggtggaggaaagcaagttgttgcagtaccg
aacccagctaagttgttaatcaaactcggggttaaatcgatgacagtcgacaaatttgac
gattggttccaaagttggttggacttgatccactactttgacgattattatcttatagaa
gtggtttgttctatgacctcttataggtatattaggcgcccttctcagtttttggtttcg
gctatttctagtctgaaatctttatttgctaataagaagaaatgtaaagacttcttattt
cctgggttaagagataaaaatccagatttatccatgcgtttggatacccctataaaaata
agggatgttacctctaagagaactagaggtaaaaagaagatgaaagaaaattctcatttt
caaatagatggtaaggtcggtggatga
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