Viruses: 5075774
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Entry
5075774 CDS
T40000
Symbol
PDV_s1gp1
Name
(RefSeq) Prune dwarf virus; putative viral replicase
KO
K26863
Ilarvirus methyltransferase/helicase
Virus
33760
Prune dwarf virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Vmethyltransf
Viral_helicase1
AAA_19
AAA_30
Chropara_Vmeth
Rad17
NB-ARC
Motif
Other DBs
NCBI-GeneID:
5075774
NCBI-ProteinID:
YP_611154
RS:
NC_008039
UniProt:
P89033
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All DBs
Position
NC_008039:39..3206
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AA seq
1055 aa
AA seq
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MTSSEITAANVHELLVKVLEKQCADETTTVGKAFSEKAKQSLNKTFGLNDESKQLKISFD
LTAEQQTLLKRHFPGRSVIFSNSSSSSHSFAAAHRLLETDFIYQCFGNTDETILDLGGNY
ISHLKQRRYNVHCCCPLLDVRDCARHTERLMQYTTYKTSRPDEVHEPNFCENTFQDCSLQ
GKYAMAIHSTSDLPLGELCESLRKKGVMKFICSVMIDPEMYIKDRGHIDHFNLDWHVDKD
KDRIYFDFVDAPCLGYDHKYSTLMEYLHYNAVDLGDAAFRVERKTDFHGVMIIDITYCSG
YKPGIELNAGRSCAWLTKLKSKTLVMATDITSVVHPSLEAVSRRHILVDTKVLSRVCEAS
FRQYKPNVDAQSAIQSICTMLSSATNHCIINGVTMIAGTPLKLVDYVPVATTIYYRVKKI
YDAIPRSLGMINNLRTTGEMLDYATKQKGGIPDDRKLFSDYAFEPLRCLLSYVGSTPTRV
ETYTRDDGSIEQCALYERWGNSWNLFKGFLSGYMEVEGFLVSDPQFFVPLTGVLHMKKLI
SDAGKVLSVKELLEEQRALVALKMREQIAEREKAEKSRREYEKAIIQLAAWTKAHPDAKV
PKGLSVEEPLMPDVVKKVTADEVVPDCNPYSDAISEAIDYLRSTAEISKSRLQQLGEHCR
WKKYGFSTVWAGDESRRIFLPKENRWVGPTSTRQVGPKAQYERGYTVNGYVNFTWDDAGN
VSDACVRSLREYEIVIVDDSCVFSSVEKVIPSLEKALKMNCDFSITIMDGVAGCGKTTKI
KSIASMVGDDIDLLLTSNRSSAIELKEAVEGSQLVKSRFIRTCDSYLMTNNAPKAKKMLF
DECFMQHAGVIYAAATIAGVSEVIAFGDTEQIPFISRNDMFLLKHHVLKGDHVKQTITYR
NPADTVYALSKFFYRKKTPVKTKRHILRSIKVKPINALSQVEVDASAVYVTHTQAEKASL
LATPSFKSCKIYTTHEVQGGSFDKVIFVRLTRTSNHLYSGKHPIMGACHGLVALSRHKSE
FIYYTLAGGDNDDILLKACQYAERADDSDIVKHYV
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgacttcttccgagatcactgctgccaatgtccatgaacttttggttaaagttctggaa
aagcaatgcgctgacgagactactaccgtcggtaaggctttctctgagaaagcgaaacag
tctttgaataagacattcggactaaatgatgagtccaagcaactgaagatttcttttgat
ttgacggctgaacagcagacgttactcaagagacattttccgggtcgatcggtgattttt
tcaaattcatcgagttcctcacacagtttcgcggcggctcaccgcttactggagacagac
tttatataccagtgttttggtaacactgatgaaacaatacttgatttgggtggaaattat
atttctcacctaaaacaaaggaggtacaacgtgcattgttgttgcccacttcttgacgtg
agagactgtgcccgccatactgagcgtctcatgcagtacactacctacaagactagcaga
cctgatgaagttcacgaaccaaatttttgtgagaacacattccaggactgctccttgcaa
ggtaagtatgccatggcaatccattccacttcggatttacccttaggtgaactctgtgag
agtttaaggaagaaaggagtgatgaagtttatatgttctgttatgatcgatcccgaaatg
tacattaaagacaggggtcacatagatcatttcaatctggattggcatgtggacaaggac
aaagacagaatttattttgactttgtcgatgcaccctgtttagggtatgaccataagtat
tctacacttatggagtatttgcattacaatgctgttgatctaggtgatgccgcctttcgt
gtcgagcggaaaaccgattttcatggggtcatgattatcgatatcacctattgctccggg
tataaacctggaattgagttgaatgcaggaagatcctgtgcctggttgaccaaattgaag
tcaaaaactttggtcatggctactgatattacgtcagtagtacacccttctttagaagcg
gtgtccagaagacacatactggttgacacgaaggtcttatccagagtgtgtgaggcttca
ttccgacagtacaaacctaatgtcgatgcgcaaagtgctattcagagtatttgcacgatg
ctttcttcagctactaaccattgtataatcaatggtgttaccatgatcgcaggtactccc
ctcaaattggttgattacgtacctgttgccaccactatttattatagggtgaagaagatc
tatgatgccattccaaggtcattgggaatgatcaacaatctgagaacaactggggaaatg
ttggattatgccaccaaacagaagggtggtattcctgatgataggaaactgttttccgac
tatgcctttgaacccttgcgatgtttgctttcgtatgttggttctactcccactcgtgtg
gaaacctacactcgtgatgatggttcaattgagcaatgtgctctttatgaacgttggggc
aattcctggaacctttttaagggttttttgtcgggatatatggaagtcgaagggtttctt
gtctccgatccacaattcttcgttccacttactggagttcttcatatgaagaaattgata
agtgatgctgggaaggtccttagtgttaaggaattgctcgaggaacaacgcgctcttgtt
gccttaaagatgcgcgagcagattgctgaaagagaaaaagctgaaaagagtcgccgagag
tatgaaaaggcgattattcaattggctgcttggaccaaagcacatcctgatgctaaggtt
ccaaagggactttccgtggaagaaccattgatgccggacgttgtcaagaaagtgacggcc
gatgaagtagtaccagattgcaacccttattcggatgctatatctgaagccatcgactat
ttaaggtcgacagctgaaatttcaaaaagcaggttacaacaacttggtgaacattgcagg
tggaagaaatatgggttctcaacagtttgggctggagatgaatccagaagaatttttcta
cctaaggagaatagatgggtaggacccacatctactcgccaagttggtcccaaagctcaa
tatgagagaggttataccgttaacggttatgtgaatttcacgtgggatgatgccggaaat
gtttccgatgcctgcgtacgatctctcagagaatacgaaatcgtcattgttgatgattcc
tgtgttttctcatcagtggagaaggtaataccttcactggaaaaagctttgaagatgaac
tgtgatttttcaatcacaattatggacggtgttgctggttgtggaaaaactaccaagatt
aagtctattgcctctatggttggagatgatatagacttactcctaacttccaacagatcc
tcagcaattgagttgaaagaagctgttgaagggtcccagttagttaaaagtaggttcatt
cgaacttgcgattcctatctgatgacaaacaatgctcctaaagcaaagaaaatgttgttt
gatgagtgtttcatgcaacatgctggggtgatatatgctgctgccacaattgccggtgtg
tcagaggttatagcctttggtgacactgaacaaataccattcatttccaggaatgatatg
tttctcctgaagcaccatgttttgaaaggtgaccatgtaaaacaaacaattacataccga
aatcctgctgatacggtatatgctttgtctaagttcttctatagaaagaagacgcctgtt
aagacgaaaagacacattcttaggtctattaaagttaaacctataaatgctctatctcag
gttgaggtggatgcctccgctgtgtatgttacgcatactcaagctgagaaggccagttta
ttggctactccgagtttcaaatcttgtaagatttatacaactcatgaggttcaagggggt
agttttgacaaagttatatttgtcagacttactagaaccagtaatcatttatactctggt
aagcaccctataatgggagcttgccatggactcgtggctttgtcaagacacaagtcggaa
ttcatttattacaccctagctggaggggataatgatgatattcttttgaaagcctgtcaa
tacgctgaaagagcggatgacagtgatattgtcaaacattatgtttga
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