Viruses: 5075896
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Entry
5075896 CDS
T40000
Symbol
CVYV_gp1
Name
(RefSeq) Cucumber vein yellowing virus; gp1
Virus
137475
Cucumber vein yellowing virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
RdRP_1
Poty_coat
Poty_PP
Peptidase_C4
DUF3725
Peptidase_S30
Helicase_C
DEAD
Peptidase_S76
ResIII
SPT_ssu-like
Motif
Other DBs
NCBI-GeneID:
5075896
NCBI-ProteinID:
YP_224077
RS:
NC_006941
UniProt:
Q592M4
LinkDB
All DBs
Position
NC_006941:68..9514
Genome browser
AA seq
3148 aa
AA seq
DB search
MAEVYSFVPKTDYEKRMVKRFGTDKFLQFREQCPLSQVRKCWTHFKVCDGACYAYLLVHF
TEEGAREFLELSAGRRKLVLDNVRRALCSALYYNPNEEDFECECGNSNTSWKRVCEDCEQ
VYAYSEMNLLQELSKIARGLSCYINELKNFTIHDIADEVSYAEKSRRMTTVESGFKTVGE
ISLRTEVVEAVISEKPVESVTVKAVVAEKPVEASDNSRVAMEEKKPQTKQVWKMVTGKPK
PTVIPECKPEAPTKKEIQTCLDLVVQIGDFIINTRTREFKMVDEENECTEKVEETEVKEP
VVENPNKDTVVLNDFFKNFQFNEERRSKIYTDKHGNVRYGKRPMKKRKRGKKVELVSDKI
ITKIETPEEVQPVYSFEDLPSIKKAYSKKKPREIIKTRTEYSVRSLVKEIGKTCSFTEIM
IIDKKIRKIKKRGSRYFVDVRHLNGCNPEVDLDHSSFSDEILDWLMASLAVKSTKLSEIV
PGTSGLITVGRNEFGKFTIIRGWLDRIVDARENLTKSQLRRIRNYTIHGLHAFKKRYQTN
AIDRECTTQIQIKDNVVYLKGEGALQNFINSSILGGLVRNASGVTKPALACLRKATKYGV
GFDMMMNHYVCCRCHVRCTDISLMNTMCNECGENMFESVGHESPSVTLPINPFECDVHPA
VAEIMKEAWWRDGVEDWPIEKKYHSNGKEIYVEKQGQRAWRSEFQLRETSSSRESDLGFA
AADNGVCLCEANFAWLDMFPCITLNHIFGLDFDDDMDPEIRDIMTRDNAQRVFSTGRLVK
YADICPGWSGVVITEDAVQPEEWNKFAWYNGICVVQGKNRESGIIENAIIMKTADEKDKI
DFYCFDLSWAKSKTKFIEYFAEDETRIIKACCTPSSLWLFAKKSSLYKYVDYLLLHESSV
VDLCVKFEFVGKHLSLLEDVEDACIEFSHFMDETIQSRNVQDEPELARIRALIRSQFDSV
RESSKYEIIDRIIEKKTKLQADEIIMRELIRRQYAELFSWRERALMNFCSKQTRLYDLWE
KREKANSSSSSTISSLISRPGLEIMTNWASTVCKTQYTRSIRAIDSAIRFVWHRIVFISK
QALFKWWESCVFHVFCVLLTALVTYSLSQIVSFMKRITDKEKKEALALEEDLVEIQGKKE
EATIMKWCAMLTLVMSFINFDWALASVSALGKMKTIFSALGPNLIELQSGEEDAFKFTTF
EVEVPGNGKSCDDQTFEDWINHCIKYNLTTPEPTTSGPMLVLEKGKAKELAEKIRMHDSC
DLRVYGGVGTGKSTSLPSEIMKFGPVLICVPTRVLANALHDSYMALFGYDVSVAYRGRVR
TGTQPITVMTYGYALNHFHYNPQNLNSFEYVIMDEIHTFPTELNPLFSLIRETNPRKKII
KTSATHVGHNVELSTNFKVNIETLSPMGVKKWVELQGTNVFGDATSSGETILVFVATYNE
VDEAAEGLRNKGFPVLKVDGRNFRKNTEVQKMVDDLPGNIKFIVATNIIENGVTLDVDTL
VDFGERVSPVLDSDGRSIVMARRRISKAERQQRFGRVGRMKPGTIYKFGKEALPDSMKSV
VGATESAMICFAYGIKPVVDDVDIGSIARVTKKQALTASLYDLNRIFTVHHVDKHGFIPR
AVHELFKTFMLRTEAVAICESYLSSDSSSWKALHTYLRPSEEMAHVRNVKIPWYCSDMSN
EFIIKLAECVNHAKPKFSCGYDVENIDFHVVAHKISVGEHNIEESKALVSEILNRVKQWR
DNLVYKMSTPRNNSLMSLMVGWIPKKIEKTRSQLEMRIQRLEMLLSQLDNVSVNHDYESL
VRFFAENPHSAEYLESQGKSEYLEKKVLKTNIKEADWRVIAGVITITACMAGFTYWYLRR
RTAVDQVEIQGKVGYRRDKRVGRFVFDGPDEDIIENFGVEYSHDVVTKKMSKAQKLKQAK
EKGWKIGKVDRPKKIFRQLYGVNPLEFDEVYLTVGDFKGEVWETKDMDIDEMYSDLYSDF
NLGNRKGYSKDVYLVFSKKDSDIEAVVDLQPHRSKMASSMSLNPMGFPEEEGRWRQSGDV
KMRKRIEEEVEVQVAETAIASKFAHIFQRLGRLGFSGRGLNCVFHGDKSIMPCHLASGGD
PGDSLIVTTSRGQFDMGPMEMIKCKKITDFDLVVGQLPKDMQPFKSTNIMRKPKMDEDVV
IITLKRDKGKMLIRTSDTSKIYKADDKYAHLWVHFIKSESGDCGSPIVALSDNKIVGFHS
GMIKDKLGVFLRSVFTPVNDELLRTLNEKSEMNDFWKFNQDAISWNAVIKTSSLFPVMKD
ILGVHLQVGAGDKYIGGNLMTVGEVNKHAYHNHVIKGKRKEFVEFCAQNPNNNFEKFRDF
YGPSVMTVSAFYKDLLKYDEPIRVGVIDFPSLVHAYLNVEDKLLSLGFDEDCGPEWDPYE
IYCDLNKKAAMGALYQGSKNDWLKEITPKEFIEQVQESYRLLGHGVVGIWSGSLKAELRT
KAKIAEGKTRVFTGAPIDVLLAGKVLVDKFNKHFYTQHLKGPWSVGINKFNRGWDKLARY
FNHDWKFIDCDGSRFDSSLSPILFQMVCHMRERFGHFDWAETNALRNLYAQIVYTPILTI
DGNIVKKHKGNNSGQPSTVVDNTLILMLVVEYCKSWHFKQSGVKMEFKYMCNGDDLIINA
PDREISIIQSTFKNLLKECGLNYDFDDLHDSIEDVEYMSHHFVLREGFYIPKLSKERLVA
ILEWERSDELFRTRSASNAAYIESFGYDDIHWEIERFAAYWANLKGVKNVLMSEDHVRKL
YLDENFELTDEIVQTLSPASFEFGYVELQADDIEKEAIEQEIEKLRNEWKANGPSRTVSN
YEARKRQTPIAAKVDELLKQLKEAGVETLKRPCGQPNADEDKKENSNSNWTGESDEEDEG
KKKRMPLRGGGKMMKRDDVDKIPTNAMEFKRDFKPARASRTSYIWIPRSQRDNLTPDVVK
NFLAYIPPSQAIDNQMASGSQVENWAMRTASAYGVTIQQFYETVLPAWIVNCIVNGTSDE
RKTETVWRAVELNAQGEDVDDMEYPIEPIYKHALPTMRKIMRNFSSQAILMYQNSVAEGK
AFTVKAARNAGYTEIEDQWLGIDFLAEAQLSRNQLNIKHQTLAANVSRNRRNLFALAAPG
DDGRVNAERHLTTDASASRHTYGGAMIE
NT seq
9447 nt
NT seq
+upstream
nt +downstream
nt
atggccgaagtttacagtttcgttcccaaaacagactatgaaaagagaatggtaaagcgt
tttggaactgataagtttcttcagtttcgagagcaatgccctttaagtcaagtccgtaag
tgctggactcatttcaaggtgtgcgatggcgcctgctacgcgtatcttcttgtacacttt
actgaagaaggggcacgggagttcctggaactcagtgcgggaagaagaaagttagttctg
gacaatgttaggcgggctctgtgttctgcgctatactataatcctaacgaagaggatttt
gagtgtgaatgtggaaactcaaacacgagttggaaacgtgtttgtgaagactgcgaacag
gtttatgcatattctgaaatgaacctgttgcaagaactgtcgaaaattgcacgcgggcta
agctgctacattaatgagcttaaaaatttcactatccatgacatagccgatgaagtgtca
tacgcggaaaagagtaggaggatgacaacggttgaatcgggatttaaaaccgttggcgaa
atcagcttgagaactgaagttgtggaggctgtaatttctgaaaaacccgtcgaatcagta
actgtaaaggctgtggttgctgagaagcctgtcgaagcatctgacaactccagggtggcc
atggaagagaagaagccacagactaaacaagtttggaagatggtgactggaaagcccaaa
ccaacagtgattccggagtgcaaacctgaagctccaacaaagaaagaaatccaaacatgc
ttagacttggtagttcaaattggagattttatcattaacactcgtacacgtgagttcaag
atggttgatgaagagaatgagtgcactgagaaagttgaggagacagaggtgaaggaacct
gtggttgaaaacccaaataaagatacagttgtcctgaacgatttcttcaagaatttccaa
tttaatgaagagagaagatcaaagatttatacggacaagcatggaaatgtgaggtatggc
aaaaggcctatgaagaaacggaagagaggtaagaaggttgaacttgtgagtgataaaata
atcacgaagattgaaacacctgaggaggttcaaccagtatactcatttgaggatttaccg
tcgataaagaaagcttacagtaagaaaaagccacgggaaattattaaaacgagaaccgag
tattctgttcggagtttggtgaaggaaattggaaaaacatgttctttcaccgaaatcatg
ataatcgacaagaagattcggaaaataaagaaacgtggttcgagatactttgtcgacgtt
aggcatctgaatgggtgtaaccctgaagttgacttggaccattccagtttctctgatgaa
attttagattggttgatggcatccttagccgtaaaatccacaaaattaagcgaaatagtt
cctggaactagcggtttgataacggtaggaaggaatgagtttggaaagttcaccataatc
agaggatggcttgaccggatagtggatgcgcgcgagaacctcacaaagtcacaattaaga
aggattcgcaattacacaattcatggattgcatgcgttcaagaaaagatatcaaacgaac
gcgattgatcgagagtgcaccacgcaaattcagatcaaggataatgtggtgtatttgaaa
ggggaaggagccctacaaaactttatcaactcttctattcttggcgggttggtgagaaat
gcaagtggcgtcacaaaaccagctttggcatgcttgagaaaggcaactaagtatggtgtt
gggtttgatatgatgatgaatcattacgtttgttgcagatgtcacgtgagatgcactgat
atatctctcatgaataccatgtgcaacgagtgtggggagaacatgtttgaatcagtgggg
cacgaatctccatctgttactctaccgattaatccgtttgagtgcgatgtgcaccctgca
gtcgctgagatcatgaaagaagcttggtggagggatggtgttgaagattggcccattgaa
aagaagtaccattcaaatggtaaagagatatatgtggaaaagcaaggccaacgagcatgg
aggagcgagttccaattaagagaaacctcatcaagcagagagtccgacttgggttttgca
gcagctgataatggtgtttgcttgtgtgaggccaattttgcgtggttggatatgtttccg
tgtattacattgaaccacatctttgggttggattttgatgatgacatggatccagagatc
cgtgatataatgactagggacaatgcccagcgcgtattttcaacaggaaggctggttaaa
tatgccgatatatgcccaggatggagtggggtagtcataacagaggacgctgtacaacca
gaggaatggaataaatttgcatggtacaatggcatttgtgtggtgcaaggtaagaacaga
gagagtggaattatagagaatgccataatcatgaagacagcagatgagaaagataaaatt
gacttttattgcttcgatttaagctgggctaagagcaaaacaaagtttattgaatatttt
gctgaggatgagacaaggatcattaaagcttgttgcacacctagctcactgtggttattc
gcaaagaagtctagtctatataaatatgtagactaccttctcttacatgagtctagtgtc
gtagatctgtgtgtaaaatttgaatttgttgggaagcatttaagtttgttagaagatgta
gaggatgcgtgcattgagttttcacacttcatggatgaaacaatccaatctcgaaatgtc
caagatgaaccagagctagccaggatacgcgcattgattcgcagtcaattcgactctgtt
cgggagagcagtaaatacgaaatcattgatcgaatcattgagaaaaaaacaaaattgcaa
gcagacgaaattattatgcgcgagctcattcgtcgacagtacgcagagttattttcatgg
cgggagcgcgcattaatgaatttctgttcaaagcagacgcgtttgtacgatttatgggaa
aaacgcgaaaaggccaattcaagttcgtcttcgaccatttcgtcactaatatcaagaccg
ggcctcgagatcatgacaaactgggcctccacagtgtgtaaaacgcaatatacaaggtca
attagagcaattgatagtgcgattagatttgtttggcatagaattgtttttataagtaaa
caagccttgtttaagtggtgggagtcgtgcgttttccatgttttttgtgttttgttaact
gcgttagtcacttacagtttaagtcaaatcgtatcattcatgaagaggataacggataaa
gagaagaaagaagcactagcattagaggaggatcttgttgaaattcaagggaagaaggaa
gaagcaacaatcatgaagtggtgcgccatgctgaccttagtgatgagttttataaatttc
gattgggctttagctagcgtatctgcgcttggaaaaatgaaaacaatctttagtgcactt
gggccgaatctgatcgaattacagtctggtgaagaagatgcattcaaattcacaacattt
gaagttgaagtgcctgggaatggcaagagttgtgatgatcaaacattcgaagattggata
aaccactgcatcaagtacaatctaacaactcctgaacccactactagtggaccgatgtta
gttcttgagaaaggaaaagcaaaggagttggcagagaaaattcgaatgcacgattcatgc
gatttgagggtttatggtggcgttggaactggaaaatcgacaagcttgcctagtgaaatt
atgaaatttggtccagttttaatttgcgtacccacgagagtattggccaacgcattacat
gattcatacatggctctttttggctacgacgtctcagttgcgtacagagggagagttaga
acaggaacgcaacccatcacggttatgacgtatggttatgcattgaatcacttccattac
aaccctcagaacttaaatagttttgaatatgttattatggatgagattcatacattccca
accgaactcaacccattattttctttgattagggaaaccaatccaagaaagaagattatt
aaaacatccgccactcatgtgggacacaatgtagaactttcaacaaactttaaagtgaac
attgaaactttaagtcctatgggtgtgaagaagtgggtggagttacaaggaactaatgtg
ttcggggatgcgacaagttctggtgagaccattttagtctttgttgcaacatacaatgaa
gttgatgaagccgcagaagggctaaggaataaaggatttcctgttctcaaagtggatggc
agaaattttcgaaagaacacggaagttcaaaagatggttgacgatctgccaggaaacatc
aagtttattgttgccactaacatcatcgagaatggagtgacattggatgtggacactctt
gttgatttcggtgagagagtgtcacctgtactcgactcagacggtagatcaatcgtaatg
gcacggaggcgaatttcaaaagctgaaagacagcagagatttgggagagttgggagaatg
aagccaggcacaatttacaagttcggaaaagaagctctaccagattctatgaaaagtgtc
gtgggtgcaactgagagcgctatgatttgttttgcatatggtatcaaaccagtggttgat
gatgttgacatagggtcaattgcaagagtgacaaagaaacaagctttgaccgcttctttg
tatgatctaaacagaatcttcacagtgcatcacgtggataaacacggtttcattccaaga
gctgtgcatgaattgttcaagacctttatgctgcgtacggaggcggtggcgatttgcgag
tcatacttatcgtcagactccagtagttggaaggcattacacacatatttgagacctagt
gaagaaatggcgcacgtacggaatgtcaagataccctggtattgttctgatatgagtaat
gagttcataattaagcttgcagagtgtgtcaaccatgccaaacccaagttttcgtgcggt
tatgatgtggaaaacatcgattttcacgttgttgcccataaaattagtgttggtgagcac
aatattgaagaatcaaaagcactagtgagcgaaatattgaacagagttaaacaatggaga
gataatcttgtttacaagatgagcactccaaggaacaatagtttgatgtcattgatggtt
ggttggataccaaaaaagatcgagaaaactcggagccaactcgaaatgaggattcagaga
ctcgaaatgctattaagtcaacttgacaatgtctcagtgaaccatgattatgagagttta
gtccggttctttgctgaaaatccacattccgccgaatatttagaatctcaagggaagtct
gagtaccttgaaaagaaagttctcaaaacaaacattaaagaggcagattggagagttatt
gcaggagtcatcacgataaccgcatgtatggctgggtttacatactggtatttgaggaga
agaacagcagttgatcaggtcgaaattcaaggaaaggttggttacagacgcgacaaaaga
gtcgggagattcgtgtttgatggacctgatgaggacataattgagaatttcggagtcgag
tactcccacgatgtagtaaccaagaaaatgtcgaaagctcagaagttgaagcaagcaaag
gagaaaggttggaagataggtaaagtggatagaccaaagaaaatattcagacaattgtat
ggagtgaatccattggaatttgatgaagtctatcttacagttggagatttcaaaggggaa
gtctgggaaacaaaagacatggatatcgatgagatgtactcagatttatattcagatttc
aaccttgggaacagaaaaggctattccaaggacgtgtatcttgtcttttctaagaaagat
tctgacattgaggctgtcgttgatttacaacctcatagatcgaaaatggcaagttctatg
tctctgaaccccatgggatttccagaagaagaaggcagatggagacaaagtggggatgtg
aaaatgcgaaaacgaatagaagaggaagtggaagttcaagtcgctgaaaccgcaattgct
tcgaaattcgcacacattttccaaagattaggcaggcttggatttagcggtagaggtttg
aattgcgtattccatggagacaagagtatcatgccatgtcacttggcgagcggaggagat
cctggagattcattaattgtgacaacttcaagagggcaatttgacatgggtccaatggaa
atgataaaatgcaaaaagataacagatttcgacctcgtcgttgggcaactgccaaaggat
atgcaaccattcaagtcaacgaacatcatgaggaagccgaaaatggatgaggatgtcgtg
ataataacattgaaaagagacaagggtaagatgttgattagaacaagcgacacaagcaag
atctataaggcagatgataagtacgcacatttgtgggtacactttatcaaaagcgaaagt
ggggattgtggcagtccaattgtagccctgtcggacaataaaatagtcggatttcatagt
ggtatgattaaagataaactcggagttttcctacgatcagtattcacacccgtgaatgat
gaattgttgagaacactgaacgagaagagcgaaatgaacgacttttggaagtttaaccaa
gatgccatttcgtggaatgccgttattaagacatctagtctgttccctgtgatgaaagac
atattaggagttcatctccaagttggagcgggggacaagtacattggagggaatctcatg
acagttggcgaggtaaacaagcatgcatatcacaaccatgtcattaaaggaaagaggaag
gaattcgtagaattttgcgctcagaatccaaacaataattttgagaagttcagagatttc
tatggcccaagtgtgatgacggttagcgctttttataaggacttgctcaaatatgatgaa
ccaatcagagttggagttatcgacttcccaagtttagtgcatgcatatctaaatgtggaa
gataagttgcttagcttgggtttcgatgaagattgtgggccggaatgggatccatacgaa
atatattgcgacttaaacaagaaagccgcaatgggagctctctatcaaggatcaaagaat
gattggctgaaagagataacaccaaaggaattcatagagcaagttcaagagagctataga
ttgttgggtcatggcgttgttggtatttggagtggatcactgaaggcggagttgcgaact
aaagcgaagattgccgaagggaaaacgagagtgtttacaggcgcacccattgatgtgtta
ctggccggaaaggtgctcgtcgacaaattcaacaagcacttttatacacagcacttaaaa
ggaccttggtctgtcgggataaataagtttaatcgtggttgggacaagcttgcacgctac
tttaaccatgattggaagtttattgattgtgatggaagcaggttcgatagttcactttct
ccgattttatttcaaatggtgtgccatatgagggaaaggtttggtcattttgattgggct
gaaacaaacgcgctgaggaatttgtatgctcaaatcgtttacaccccaattctcactata
gatggaaacatagtgaagaaacataagggtaacaacagtggtcagccgtcaactgtggtg
gacaataccctcattctcatgctggttgttgagtactgcaaatcttggcactttaagcag
agtggagtcaaaatggagtttaagtacatgtgcaacggtgatgatctcatcattaacgct
cccgatagagagataagcattatccaatccaccttcaagaacttgctcaaagaatgtggt
ttgaactatgactttgacgatttgcatgacagcatagaagacgttgaatacatgagtcat
catttcgtgcttcgtgaggggttttatattccaaaactcagcaaagagaggttggttgcc
atcttagaatgggagagaagtgatgagctgtttagaacgagaagtgcctcgaatgctgca
tacattgaaagttttggttatgatgacatacactgggagattgaaagattcgctgcatat
tgggcaaatttaaaaggagtcaagaatgtattgatgagtgaagatcatgtcaggaagttg
tatctcgacgagaattttgaattgacagatgagatagttcaaacattatccccagcttca
tttgaatttggatatgttgaactacaggcagacgacattgagaaagaagcaatcgagcaa
gaaatagagaaactccgcaatgaatggaaggcaaatggtccaagtcggactgtgagtaac
tatgaggccaggaagagacaaacaccaattgcagctaaagtggatgagcttttaaaacag
ctcaaagaagcaggtgttgaaactctcaagagaccttgtggacaaccaaatgcggatgaa
gataagaaagaaaactccaattcaaattggactggagagtccgatgaagaggacgaaggg
aagaagaagagaatgccactacggggaggtggtaagatgatgaaaagagatgatgttgat
aaaatccccacgaacgccatggaatttaaaagagatttcaaaccagcaagagcttcaaga
acttcatacatctggattcctaggtcgcagcgcgacaacttaacgccagatgtcgttaaa
aatttcctggcttatattcctccatcccaagccatagacaaccaaatggcttctggttct
caagtggaaaactgggctatgagaacagctagcgcgtatggggtgactatccaacaattt
tacgaaactgtgttaccggcttggatcgtcaactgcattgtgaatggcacaagtgatgag
aggaaaactgaaacagtgtggagagcagttgaattgaatgcccaaggggaagatgttgat
gacatggaatatccaattgagccaatttacaaacatgctctcccaactatgagaaagata
atgagaaatttcagctctcaagccatcctcatgtaccaaaacagtgtagctgagggtaaa
gcattcactgtgaaggctgcccgtaacgctgggtacactgagattgaggatcagtggctt
ggaattgattttctggctgaagcacaactctcgcgaaaccaattaaacataaagcaccag
acacttgccgctaatgtttcgcgcaataggaggaacttatttgcacttgcggcgcctgga
gatgatggtcgtgttaacgctgaacgccatctgacaaccgatgcatctgctagccgccat
acttatggtggagcgatgattgaatga
DBGET
integrated database retrieval system
