Viruses: 5075910
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Entry
5075910 CDS
T40000
Symbol
WMV_gp1
Name
(RefSeq) Watermelon mosaic virus; polyprotein
Virus
146500
Watermelon mosaic virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Peptidase_C6
Poty_coat
RdRP_1
Poty_PP
Potyvirid-P3
Peptidase_C4
Peptidase_S30
Helicase_C
DEAD
Flavi_DEAD
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
5075910
NCBI-ProteinID:
YP_077181
RS:
NC_006262
UniProt:
Q68T41
LinkDB
All DBs
Position
NC_006262:133..9786
Genome browser
AA seq
3217 aa
AA seq
DB search
MATIMFGDFTVQLKHSIVTEKRKRVIETTKLEQEVRMETVCETVMESITVGCTTRCAGLS
AYTKSSLRRAIKEGDLSASGGCNYCGLRALVGEGRERVISVPRVVTQQKEIIVTKEVPHI
YEEEYEVEVPYLVTEPLLPMVGTFPGSDVYKTTVQEKALNNIVTKDMMAKSEPSMKQVSR
SLVLAGRKEVCSYDLAIKRMDEAIQRDSALQRRLLIQQYSTIRQLPKGAVQLGLCSYEQA
KQRAELACKRKQEEDFLSGKYEQQAYIGTAAINTAKPTGRSVGFRTIHWKPTPKQNKIKR
AKKQCDKPTYVLKEILSLAARTGKPVEFITRRTRKNFKVNYVRKYGAVIPKFTLPHEEGK
YVHQELQYANICEFLPYICMFARYKTVCAENLTHGDSGLLFDERSLITTEHTTLPYFVVR
GRENGKLVSAFEEFREIGDIQHYSHTPEVQFFLGWKKVFDKMQPRVDAHECTIDFTNEQC
GELAAAISQSIFPVKKLSCKHCRRHIKDLSWEEYKQFLLTHMGCSEATWENVREAEGMEH
VKKLIERSTAENLNLQTSMEIVRLTQNYKSTHMLQIQDINKALMKGSSVTQDELERASRQ
LLAMTQWWKNHMNLTDEDALKVFRNKRSSKALLNPSLLCDNQLDRNGNFVWGERGKHSKR
LFANYFEEVIPSEGYSKYVIRKNPNGQRELAIGSLIVPLDFERARTALQGKSIAKEPITM
ACISRQDGNFVYPCCCVTHDDGKAFYSELKSPTKRHLVIGTSGDPKYIDLPATETDRMYI
AKEGYCYLNIFLAMLVNVNEDEAKDFTKMVRDVIVPKLGQWPTMFDVATAVYMLTVFHPE
TRNAELPRILVDHASQTMHVIDSFGSLTVGYHVLKAGTVNQLIQFASNDLHSEMKFYRVG
GEAQQRMKCETALIKSIFKPKRMIQILEDDPYILLMGLISPSILIHMYRMKHFEKGIELW
ISKEHSVAKIFIIMEQLTRKIAANDLLLEQLDIIAGTSQKLMDVLEDCPQSAHSYRTAKD
LLAIYIERRASNNQLIENGFVDINDQLYVTHEKIYVDRLKQEWHALSWLEKSSITWQLKR
FTPHTEQCLTKKVVEESSAYSRNFVSACFMNAQSHLKNVRNTFFRKCDQAWTASVRVLVR
FIIATLHKCYSDIVYLVNICLIFSLLVQMVSVLQGIVSTAKRDKAFVHMHKRIEDEQAVV
HLYEMCEKMENKHPSVEEFLSHVKKVRPELLPVAKSMTGQSEDVSAQAKTATQLQLEKIV
AFMALLTMCIDNERSDAVFKILSKLKTFFGTMGEEVKVQSLDEIQNIDEDKKLTIDFDLE
TSKEPSSVSFDVKFEDWWHRQLQQNRVIPHYRSTGEFLEFSRETAAKIANLIATSSHTEF
LIRGAVGSGKSTGLPHHLSKKGKVLLLEPTRPLAENVSKQLGLEPFYHNVTLRMRGLSKF
GSSNIVVMTSGFAFHYYVNNPHQLSDFDFIIIDECHVQDSHTIAFNCALKEFEFSGKLLK
VSATPPGRECEFTTQHPVKLKIEDHLSFQNFVQAQGTGLNADMLQHGNNLLVYVASYNEV
DQLSRLLTEKHYKVTKVDGRTMQMGNVEITTTGTEGKPHFIVATNIIENGVTLDIDCVID
FGLKVVAVLDTDNRCVRYNKQSVSYGERIQRLGRVGRHKPGFALRVGHTEKGIEEVPEFI
ATEAAFLSFAYGLPVTTQSVSTNILSRCTVKQARVALNFELTPFFTINFIKYDGGMHPEI
HRLLKPYKLRESEMMLHKLAIPHQFVGQWISVKEYNRQGIHLNCPETVRVPFYVNGIPDK
LYESLWDTVCNYKCDAGFGLIRSVNASKISYTLSTDPTAIPRTLVILDHLLSEEMTKKSH
FDTIGSSVTGYSFSLAGIADGFRKRYLRDYTQQNIAILQQAKAQLLEFDCTKVDINNLQS
VEGIGILNAVQLQSKHEVSKFLQLKGKWDGKKFMNDAIVAIFALIGGGWMLWDYFTRMIR
EPVTTQGKKRQIQKLKFRDAFDRKVGREVYADDYTMEHTFGEAYTKKGKQKGSTRTKGMG
RKSRNFIHMYGVEPENYSMIRFVDPLTGHTMDESTRVDIRLVQQEFGEIREEMIGADELD
PQRVYHNPGIQAYFIGKNAKEALKVDLTPHVPTLLCQNSNAIAGFPEREGELRQTGLPQI
VPKVDVPRAKERVEVESKSVYKGLRDYSGISTLICQLTNSSDGHKETMFGVGYGSFIITN
GHLFRRNNGMLTVKTWHGEFVIHNTTQLRIHFIQGKDAILIRMPKDFPPFAKRNFFRQPK
REERVCMVGTNFQEKSLRATVSESSIILPEGKGSFWIHWITTQDGFCGLPLVSVNDGYIV
GIHGLTSNDSEKNFFVPFTDGFETEYLNNADNLSWDKHWFWEPSKIAWGSLNLVEEQPKE
EFKISKLVSDLFGNTVAVQSRKERWVLDAMEGNLIACGQADSALVTKHVVKGKCPHFAQY
LSLHDEAKQFFEPLMGAYQPSRLNKDAFKKDFFKYNKPVVLNEVDFNAFEKAVEGVITMM
VDFEFAECLFVTDPDEIYGSLNMKAAVGAQYKGKKQDYFSGMDSFDKERLLYLSCERLFN
GEKGIWNGSLKAELRPIEKVQANKTRTFTAAPIDTLLGAKVCVDDFNNQFYSFNLKCPWT
VGMTKFYGGWDKLMRSLPDGWTYCHADGSQFDSSLTPLLLNAVLSIRCCFMEDWWVGKEM
LENLYAEIVYTPILAPDGTIFKKFRGNNSGQPSTVVDNTLMVVIAMYYSCCKQGWSEEDI
EERLVFFANGDDIILAVRDEDVWLYDTLSASFAELGLNYNFDERTKKREELWFMSHQAML
VDGIYIPKLEPERIVSILEWDRSKELMHRTEAICAAMIEAWGHTELLQEIRKFYLWLLSK
DEFKELAASGKAPYIAETALRKLYTDVNTQPSELQKYLEVLDFNHIDGCCESVSLQSGKE
AVENLDAGKDSKKDTSGKGDKPQNSQTGQGSKEQTKTGTVSKDVNVGSKGKEVPRLQKIT
KKMNLPTVGGKIILSLDHLLEYKPNQVDLFNTRATKTQFESWYSAVKVEYDLNDEQMGVI
MNGFMVWCIDNGTSPDVNGVWVMMDGEEQVEYPLKPIVENAKPTLRQIMHHFSDAAEAYI
EMRNSESPYMPRYGLLRNLRDRELARYAFDFYEVTSKTPNRAREAIAQMKAAALAGINSR
LFGLDGNISTNSENTERHTARDVNQNMHTLLGMGPPQ
NT seq
9654 nt
NT seq
+upstream
nt +downstream
nt
atggctacaattatgtttggagatttcactgtgcaactgaagcacagcatagtgacagaa
aagagaaagcgggtgattgaaaccaccaagttggagcaagaggtgcgtatggaaaccgtt
tgcgagacagttatggagagcatcactgtagggtgcacaacaaggtgtgcgggcctgagc
gcatacacaaaatcgtccctcaggagagccatcaaggaaggagaccttagtgcatcagga
gggtgcaattattgtggtcttcgagcactggtaggtgagggtcgcgagagggtgatttct
gtacccagagtagtgacacagcagaaggagataattgttactaaggaagttcctcatatt
tatgaggaagaatatgaggtagaggtaccatacttagtaactgaaccgttgctaccgatg
gtgggcacctttcctgggagtgacgtttacaaaactactgtacaggaaaaagcactaaac
aatattgtcacaaaagatatgatggcaaagtctgagccatcaatgaagcaagtcagtcga
tctcttgttttggctggcagaaaagaggtttgtagctatgatttggccatcaaaaggatg
gatgaggcgatacagcgtgattccgcactacaacgaagacttctcatccaacagtatagc
actatcagacagctacctaagggagctgttcagctagggttatgctcgtatgaacaagca
aagcagcgcgctgaattggcgtgtaaaaggaaacaggaggaggatttccttagtggcaag
tatgaacagcaagcttatatcggaacagctgctattaacactgcaaaacccacaggcagg
agcgtgggatttaggacgattcattggaaaccaactccgaagcaaaacaagattaagcgc
gccaagaagcagtgtgacaaacccacatatgttctaaaagaaattctctccttagctgcg
aggactgggaaaccagttgaattcataacaagacgcacaaggaaaaatttcaaagttaat
tatgtgaggaagtatggagctgttataccaaaattcactcttccacatgaagaaggcaaa
tacgtacatcaagaacttcaatatgcaaacatatgtgaatttcttccatatatttgtatg
tttgcaagatataaaactgtatgcgcagaaaatttgactcatggagatagtgggttactg
tttgatgaacgatctttaattactacagaacacactacgttaccatactttgtggtgcga
ggtagagagaatggaaagctcgtcagcgcctttgaagagtttagggagattggagatatt
caacactattcccacactccggaagttcaatttttcctaggctggaagaaggtgtttgac
aagatgcaaccacgagttgatgctcatgagtgcacaattgattttacaaatgaacaatgt
ggtgaattggcagcagcaattagtcaatcaatctttccagttaagaaattgtcatgtaaa
cattgcaggcgacacatcaaagaccttagttgggaggagtataagcagtttcttctgact
catatgggttgttctgaagccacatgggagaatgttcgagaggctgagggcatggagcat
gtaaagaaattaattgaaagatctactgcagagaatctgaacttacaaacgtcaatggag
atcgtaaggttaacacagaattacaagagcacacatatgctgcagatacaggacatcaac
aaggctctcatgaaaggttcgtcggtgacacaagatgaactggagcgagcttccagacaa
ctgcttgccatgacacagtggtggaagaatcatatgaacttgactgatgaggatgcactt
aaagtgtttagaaataagcgatcctctaaagcattactcaaccccagtttgctttgtgat
aatcagttggataggaacggtaattttgtttggggcgaacgtggtaagcattcgaagcgg
ctcttcgcaaattactttgaagaggtaattccctctgagggatacagtaaatacgtaatc
agaaagaacccaaacggacaaagggaattggcaatcgggtcgctcattgtaccattagat
tttgaacgtgcacgcacggcattgcaaggtaaaagcatagcaaaggaaccaatcacaatg
gcgtgcatttccaggcaggatggtaattttgtatatccttgctgttgtgtcacacatgac
gatgggaaggctttctattcagaactcaaaagccctacaaaacgtcacttggttattgga
acgtctggtgatccgaaatacattgacctcccagccacagagacagatcgcatgtatata
gcgaaggaaggatattgctacctcaacatcttcttagcaatgttagtcaatgttaatgag
gatgaagccaaagatttcaccaaaatggttagggatgttatagtgccaaaacttgggcaa
tggccaacaatgtttgatgtggccacagctgtgtatatgttgacagtttttcatcctgaa
actaggaatgctgaacttccacgcattttagttgatcacgcaagccaaactatgcacgtt
atagattccttcggatctttgacagttgggtatcacgtcttgaaagctggtacagtgaat
caacttattcaatttgcatcaaatgacttgcacagcgaaatgaaattttacagggttggt
ggggaagcacaacagagaatgaagtgtgaaacagcactaatcaagagcatttttaaacct
aagagaatgatccaaatacttgaagatgatccgtacatactccttatgggtttaatatca
ccttccattttgattcacatgtatcgtatgaaacatttcgaaaagggaatcgaattgtgg
ataagcaaggagcatagtgttgcaaaaattttcataatcatggagcaactcactagaaag
attgcagcaaatgatttgttgctcgaacagcttgacataattgcagggacctctcaaaag
cttatggatgttttagaagactgtcctcaatcagcacattcatacaggacggcaaaggat
cttttggctatatatatagaaaggagagcgtccaacaaccagctaatcgagaatggattt
gttgatataaacgatcaattatacgtaacgcatgaaaaaatctatgtggatcgtttaaaa
caggaatggcacgccttaagttggttggaaaaatcttctataacatggcaattgaaaagg
tttactccacatacggagcaatgtttgacaaagaaagttgtagaagaaagcagcgcatat
tcgagaaactttgtgagcgcgtgctttatgaatgctcagtcacacctcaaaaacgtaagg
aatacatttttccgaaagtgtgaccaagcttggactgcatcagtacgagtgcttgttaga
tttatcatagcaacgctacacaagtgctacagtgatatagtatatctagtcaatatttgt
ttgatattctcattattggttcaaatggttagtgtactgcaaggcattgtgagcacagca
aagagagataaagcgttcgtgcatatgcacaaaagaattgaggatgagcaagcagtggtg
catttgtatgaaatgtgtgagaagatggaaaacaagcatccaagtgttgaggaattcttg
agtcatgttaagaaggttaggcctgagttgcttcctgtagcaaagagcatgacgggacaa
tctgaagatgtctctgcacaagccaagacagccacgcagttacaacttgagaagattgtc
gcatttatggctttactgaccatgtgcattgataatgagcgaagtgatgccgttttcaag
atattgagcaaattgaaaacgttctttggcacaatgggtgaggaagttaaagtgcagagt
ctagatgaaatccagaacattgatgaagataagaagctaacaattgactttgatctcgag
acaagcaaagaaccctccagtgtctcctttgacgtcaaattcgaggactggtggcatagg
cagttgcagcagaacagagtcattccacattacaggtcaacaggtgagttcttggaattt
tcacgagagacagcagctaagattgcaaatttgatagcaacctcgagccacacagagttt
ttgattagaggagccgtcggttcgggaaaatcaacaggtttgccacatcatttatcaaag
aaaggaaaagttttattattagaaccgacgagaccattggcagagaatgttagcaagcag
ttaggccttgagcctttctatcataatgtgacgttgaggatgagagggttaagtaagttc
ggatcgagcaacatagttgttatgacgagtggattcgcattccattattatgtcaataat
ccacaccaactgtccgacttcgatttcattatcatagatgagtgtcacgtgcaggatagt
catacaatagcgtttaactgtgcacttaaagaatttgaattcagtggtaagctcttgaaa
gtatctgcaactcccccagggcgagagtgtgaatttacaacacaacacccagtcaaattg
aagattgaagaccatctctcatttcaaaatttcgttcaagctcaaggaacgggcttgaac
gccgatatgcttcaacatgggaataatttgcttgtgtatgttgcaagttacaatgaggtt
gaccagttatcacgactccttactgagaagcactacaaagtgacaaaggtagatggtaga
actatgcagatgggtaacgttgagattaccacaactggcacagagggaaaaccacacttt
atagttgcaacaaatatcattgaaaatggagtgacactggatatagactgtgtgattgac
tttggactcaaggttgtggcagttctggacacagataatcgatgcgtccgttacaataag
caatcagtttcgtacggcgaaaggatacagagacttggtagagtggggagacacaaacct
ggatttgcgcttagagtgggacatacggagaaaggaattgaagaagttccagagtttata
gcaactgaagcggcttttctatcttttgcgtatggattgccagttacaacacagagtgta
tccactaacatactctctcggtgtacagtcaagcaagcacgagtcgctttgaattttgag
ttgacaccctttttcaccatcaatttcataaaatatgatgggggtatgcacccagagatc
cacaggctacttaaaccgtacaagttgagagagtcagaaatgatgctacacaagttggct
ataccacatcagtttgtcgggcaatggatatcagtgaaagagtacaatcggcaaggaatt
catctcaactgcccagagacggttagagtacctttctatgtcaatggtatacccgataag
ctatatgaatcattgtgggatacggtatgcaactataagtgtgatgcaggttttggctta
ataaggagtgtgaatgcatcaaaaataagctacactttgagtacagatccaacagcaata
ccccgaacgctcgtcattttggatcatttactcagtgaagagatgaccaagaaaagccat
tttgatacaattggttcttctgtcactggttattctttttctcttgcgggtatagctgat
ggattcaggaagaggtacttaagagattacacacagcaaaatatagcaatcttacaacag
gcaaaagcacagttgctggaatttgactgtaccaaagttgacatcaacaatttgcaaagt
gtcgagggtattggcattcttaatgcagtgcaattgcagagcaaacatgaggtcagcaaa
tttttacaattgaaaggaaagtgggatggaaagaaattcatgaacgacgccatcgtagcc
atctttgctttgattggtggtggttggatgctatgggactatttcacgagaatgatacgc
gagccagtcacaacccaaggaaagaaaagacagatacagaagcttaaattcagagacgcc
ttcgacaggaaagtagggcgtgaagtgtatgctgatgactacaccatggaacatactttc
ggagaagcatacactaagaaagggaagcaaaaaggaagtactagaacgaaagggatgggt
cgcaaatcgaggaatttcatacacatgtatggagtcgaaccagaaaattatagcatgatt
cgttttgttgatccattaaccgggcacacgatggatgaaagcacaagagtggatatcagg
ttggtgcagcaggaatttggagaaattagagaggagatgattggggcagatgagctagat
ccacagagagtgtatcataatcctggaatacaagcgtattttataggaaagaacgcaaaa
gaggctttaaaggtcgatctcacaccacacgtaccaacacttttatgccaaaacagcaac
gccattgcaggttttccggaaagagaaggcgagttgcgacaaacaggtttgccacaaatt
gttcctaaggttgacgtgccgcgagccaaagagagagtggaggtagagagcaagtctgtg
tacaaggggctcagagattatagtggcatctctaccttgatttgccaacttacaaattct
tcagacggtcataaggaaacaatgtttggagttggatacggctccttcattattactaat
gggcacctattcaggagaaacaatggaatgcttacagtcaaaacatggcatggtgaattt
gttatacataacactacgcagctgagaattcattttattcaaggtaaagatgcaattctg
attcgcatgccaaaggattttccaccatttgcaaagcgcaatttcttcagacaaccgaaa
cgtgaagaacgagtttgtatggttggaacaaatttccaggaaaagagcttacgcgcaaca
gtttcagagtcttctattattctacctgaaggaaagggatctttttggatacattggatt
acaactcaagatggtttttgtgggctacctctcgtgtctgtcaatgatggatatattgtt
ggtatacatggattaacatctaatgattcagagaagaatttctttgttccatttactgac
ggatttgaaacggaatacttgaacaatgctgataatctgtcgtgggacaaacactggttt
tgggaaccaagtaagatcgcatggggctctttgaatttagtagaagagcagccaaaggaa
gagttcaagatatcaaaactcgtgtctgatctttttggcaacacggtagcagtacagagt
agaaaagagagatgggttttggatgccatggaagggaatttgatagcttgtgggcaagct
gatagcgcactagtgacaaagcacgtggttaaaggaaaatgccctcattttgcacaatat
ctttcgttacatgatgaagcaaaacagttctttgagccattgatgggggcataccagcca
agtcggttgaataaagacgctttcaagaaagatttctttaagtacaacaaaccggttgtt
ctgaatgaagttgattttaatgctttcgagaaggcagtcgagggagtgataacaatgatg
gtcgactttgaatttgcagaatgcttatttgtgactgatcctgatgagatttatggatcc
ctgaacatgaaagctgctgtcggtgctcaatacaaaggaaagaaacaggattacttttct
ggcatggatagttttgataaggagcgcctgttgtaccttagctgtgagaggctttttaat
ggagagaaaggaatttggaacggttccttgaaagcggagttgaggccaattgaaaaagtg
caggcaaacaaaactagaacatttacagcagcaccgattgatacattgcttggagctaaa
gtttgcgtcgatgattttaataatcaattctacagcttcaacttaaaatgtccatggaca
gttggcatgactaagttttatgggggttgggataagctaatgaggagtttgcctgatggc
tggacatattgccacgcagacggttcacagttcgacagttctttgactcccttattgttg
aatgctgtcctcagtattagatgttgcttcatggaagattggtgggttggaaaggaaatg
cttgaaaacctttacgctgagatagtttacacaccaatcttagcacctgatggcacaatt
ttcaaaaagtttagagggaataacagtggacagccatctacagttgttgacaatacgctt
atggttgtcattgctatgtattactcgtgctgtaaacaaggttggtcagaggaggatatt
gaagaaaggttggtgttctttgctaatggtgatgatattatcttggcagttagggatgag
gatgtgtggctgtatgacactctaagtgcttcattcgctgagcttggcctgaattataac
ttcgatgagcggacaaagaaaagagaggagctatggttcatgtcacaccaagccatgcta
gttgatgggatttacattccaaagcttgaacctgaaaggatagtttccatcttagagtgg
gataggagcaaggaacttatgcatcgcactgaggcaatttgtgcagccatgattgaggca
tggggacatactgagcttttgcaggaaattcgcaaattttatttgtggcttctaagcaaa
gatgaatttaaggaactcgctgcatccggaaaagctccatacatagctgagacagcattg
agaaagctctacacagatgttaacacacaaccaagtgaattgcaaaaataccttgaagtt
ttggattttaaccacattgatggttgctgtgaatcagtgtctctgcaatcaggaaaagaa
gcagtagaaaatttggatgcagggaaggactcgaagaaggacaccagtggcaaaggggat
aagccacaaaattcgcaaactggtcaaggtagcaaagaacagacaaaaactggtacagtc
agcaaagatgtgaatgttggatcgaaaggaaaagaagtcccacgactacaaaagataaca
aagaaaatgaaccttccaacagttggtgggaaaatcattcttagcttagaccatttactc
gagtacaaacctaatcaagttgatctgtttaacactcgagcaacaaaaacacagtttgaa
tcatggtacagcgcagttaaagttgaatacgatcttaacgatgagcaaatgggtgtgatt
atgaatggttttatggtttggtgtatcgataacggtacatctccagatgtcaatggagtt
tgggtgatgatggatggggaagagcaagttgagtatccattaaagccaattgttgaaaat
gcgaaaccaactttaagacaaatcatgcaccatttctcagacgcagcagaagcatatatt
gaaatgagaaactctgaaagtccgtatatgcctagatacggattactaagaaatttgaga
gacagggaattagcacgctatgcttttgacttttatgaggttacttccaaaacacctaat
agggcaagagaagcaatagcacaaatgaaggccgcagctctcgcgggaattaacagcagg
ttatttgggcttgatggtaatatctcgaccaattccgaaaatactgagaggcacactgca
agggacgtgaatcagaatatgcatactttgttgggtatgggtccaccgcagtaa
DBGET
integrated database retrieval system
