Viruses: 5076117
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Entry
5076117 CDS
T40000
Symbol
HVAV3e_gp063
Name
(RefSeq) Heliothis virescens ascovirus 3e; DNA-directed RNA polymerase II
KO
K26622
Ascovirus DNA-directed RNA polymerase II
Virus
260797
Heliothis virescens ascovirus 3e
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
DUF7573
Zn_Ribbon_TF
Motif
Other DBs
NCBI-GeneID:
5076117
NCBI-ProteinID:
YP_001110916
RS:
NC_009233
UniProt:
A4KXB9
LinkDB
All DBs
Position
NC_009233:69854..73321
AA seq
1155 aa
AA seq
DB search
MDYDSYRAVDLWIRKYGLVKAQLDSFASFIENIPNVLHDEPNLFMCGNELRFENITFVKP
SYIVNGKTMVLYPSTARLKNLDYEFSVRADVVNATLGTKDNIELCRLPAMVFGVLCNLHN
APDSKRLAKGEIMGDPGGYFIHNGVERVLIGHIRPAYNTITVYKTRNDKLICQLRSMNDE
TAKSKSIALHRASNGAYVIEFDGSSSNSAVSVEQSAPKSRLYLVSDVFKGLLGGSLDHAH
KYVANYQCVLRAIDELKYAPENLQCFAELADAVRTSVKEGHKGAAIMAVVKRAMIAPKRT
GGRTAKCATTQLYAKLEPIVKRLVEEGVDSSDIVVAVNGAVRYRVPECYDTMFMHIGISA
DNDARAYYLGCMFTKYVTVESGVFQAESREQYSKKRVDFAGSMCLDLFKMTWKQFLIDVM
NKSNDKCNPINAIHAVKRNITNHFKMCFVHGRWGAKSAEHKTVGVVESISMRTSIATAID
SVRRMKLQVHKENKDKSIRQMFTSHAFFACCVETTEGTDVGIRLALALVAFASVRQPTVL
VREFVENALGDMMTRSVVREGDEKSHGVLLNGTPIGYVSDVQRALCVVRKLRLLRCLHHD
VSISVDGITGALEIWCDAGRFVRPLLYNRDDDIESLKRSVMYAEHADEIFNSGHMVHRDA
IEIGREHIAITMHRAIEDNVKYVELNPNCMFGLLAAQIPFANYSPSPRACYKTNMARQSM
GVLPMLNDCNGTGNLISLNYAQRPIVTTRSAEICGVDDLPNGVNAIVAVMCYTGFNQEDS
VIINRASLDRGMFQATQRKDITVSLQIGTIVDELRKPPIEMRMDANYSNVGDDGLPIVGR
TLRKGDIIVAKVSLDKSSGRAEDTSVILKNQDECVVKAIRFIGSLIKIRVEETIHHVTNQ
TIGDKFCSAMAQKGICGMVLNQEDMPFVANSGMTPDIIVNSHSMPSRMTVNQMMASVAGK
LSCVAARRVDGSSFQNDEHDDLLAHLCDQLRKVNFDGSGAEIMCSGTTGVEFPQPVFIGV
VYYLRPVQLVKHKKFSSTTTATARNRLTRQPLNGRAHEGGLRVGEMEKDDLLCHGTVSFL
MERMLNLSDAYTMRLCTVCGSESQVVKRNDHGYVCARCKTLTVTELVLPYSAKLLHQNLQ
AIGVGCRYVVKRHDH
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atggattacgacagctaccgcgccgtggatctatggattcgtaaatacggtctggtcaaa
gcgcaattagattcttttgcttcgttcatcgagaacattccaaacgttttgcacgatgag
cccaacctgttcatgtgcggtaatgaattacgcttcgaaaacataacatttgtgaaacct
tcgtatatcgtgaacggtaagacgatggtgctatatccgtctacggcacgtttgaagaac
ctcgactacgagtttagtgtgcgtgccgacgtggtgaatgcaactttgggcactaaggat
aacatagaactatgtcgacttcccgcaatggtgttcggggtgctgtgtaatcttcataac
gctccggattcgaaacgactcgccaaaggtgaaataatgggtgatccaggtggttacttc
atacacaacggagtagaaagagtgctaataggacacatacgaccagcttataacaccatc
accgtctacaagactcgcaacgataaactcatatgccagctccgtagtatgaacgatgaa
acggccaagagcaaatcgatcgctctacatcgcgcaagtaatggcgcgtatgttatagag
ttcgacggttcaagcagcaacagtgccgtttctgtggaacaatccgctccgaaatcccga
ctgtatttggttagtgatgtgttcaaaggattactcggcggctctctcgatcacgctcat
aaatatgtagcaaattaccaatgcgtactacgcgcaatagacgagctaaagtacgccccc
gaaaacttgcagtgtttcgctgagcttgcggatgccgtacgaactagtgtcaaggagggt
cataagggtgcagctataatggcggtagtgaaacgggccatgatcgcacccaaaagaacc
ggcggtagaacggctaagtgtgcaactactcaattgtacgccaagctcgaaccgatcgtt
aagcgactcgtcgaggaaggcgtcgattcatcggacattgtcgtagcggttaatggcgca
gtgaggtatcgcgtaccggaatgttacgataccatgttcatgcatatcggaattagtgcc
gacaacgatgctcgagcttattatctcggatgtatgttcaccaagtacgtgacagtggaa
tcgggtgtgttccaagcggaatcgcgtgaacagtactctaagaagcgcgtagactttgcc
ggttccatgtgtttggacctgttcaaaatgacatggaagcaattcttaatcgacgttatg
aacaaaagtaacgacaaatgtaaccccatcaacgccatacacgcagtgaaacgtaatata
acgaatcatttcaagatgtgtttcgtacacggtcgttggggtgctaagagtgccgaacac
aaaactgtcggagtcgtggagagtatttcgatgcgcaccagtatcgcaacagccatagat
tcggtgagaaggatgaagttacaggttcacaaggagaacaaagacaaaagtattcggcaa
atgttcactagtcatgcattttttgcatgctgcgttgagaccacagaaggcaccgacgtt
ggtataaggttagcattagcgctagtggctttcgctagcgttcgtcaacctactgtactg
gtgcgagagttcgtggaaaacgcactaggcgatatgatgactcgttcggttgtacgagaa
ggcgacgaaaaatcgcacggcgtactcctgaatggcacaccgattggctatgttagtgat
gtacagcgagcgttgtgcgttgtgagaaagttgagactgctcagatgtttacaccacgac
gtgtcaataagcgtcgatggtatcacgggtgctctagaaatttggtgtgatgctgggaga
ttcgtaagaccattgttatataatcgcgatgatgatatcgaatctttgaagcgctccgtc
atgtacgctgaacacgccgatgaaattttcaattccggccacatggtgcatagagacgcc
atcgaaatcggtagagagcacatagcgatcaccatgcaccgagccatcgaagataacgtt
aaatacgtggaattaaatccaaattgtatgttcggcttattggctgctcagattccattc
gcaaactactcgccgtctccacgagcgtgttacaagaccaacatggcacgtcagagtatg
ggagtgttacccatgttgaacgattgcaacggaacgggtaatctgatttcattgaactat
gcacagagaccgatcgtaacaacacgtagtgccgagatatgtggcgtcgacgatttaccc
aatggggtgaacgcaatcgtggcggttatgtgttatacgggatttaaccaagaggatagt
gtgataattaacagggcgtcgctagaccgcggtatgttccaggctacccagcggaaggac
atcacggtgtcgttacaaatcggaacaattgtcgacgagctcaggaagccaccaattgaa
atgcgaatggacgccaactactccaatgttggcgatgatggattacctatagttggtaga
actttacgaaaaggcgatataattgtggccaaagtatctctcgacaagagcagcggccgt
gccgaagatactagcgtcatactgaaaaaccaagacgagtgtgtcgttaaagccatacga
ttcataggcagtttgatcaagatccgagtggaagagacaattcaccacgtcactaatcaa
actattggtgacaagttttgcagcgccatggctcagaaaggcatatgtggtatggtgcta
aatcaggaggacatgcccttcgtggctaacagcggcatgacgccggatatcattgtgaac
tctcatagtatgccaagccgcatgacggttaatcaaatgatggccagtgtggcgggtaaa
ttgtcatgcgtagctgccaggcgagtggacggttcgtcgtttcaaaacgacgaacatgac
gacttgctggcgcatctttgcgatcaattgcgaaaagtaaattttgacggaagcggtgcc
gaaataatgtgtagcggcaccaccggtgttgaatttccacaaccagtattcatcggagtc
gtgtactatctgagaccggtgcagttggtgaagcacaaaaagtttagcagcacaacgact
gcaacggcgcgcaatagactcacgcgtcaaccgcttaacggtcgagctcacgaaggcggt
ttacgagttggtgagatggaaaaagacgatttgttgtgtcacggaacggtatcttttttg
atggaacgcatgttgaacttgagcgacgcatacacgatgcgtttgtgtaccgtgtgtggg
agcgaatcgcaagtagttaagcgaaacgaccatggttacgtttgtgctcgctgtaaaact
ctgaccgttacagaactggtgctaccatactctgcaaaactgcttcatcaaaatttgcaa
gctatcggagttggatgcagatacgtcgtaaagagacacgatcactga
DBGET
integrated database retrieval system
