Viruses: 5076645
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Entry
5076645 CDS
T40000
Symbol
RpMV_gp02
Name
(RefSeq) Raspberry leaf mottle virus; polymerase
Virus
326941
Raspberry leaf mottle virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
RdRP_2
RdRP_3
SCAP_N
Motif
Other DBs
NCBI-GeneID:
5076645
NCBI-ProteinID:
YP_874185
RS:
NC_008585
UniProt:
A0MBW4
A0A890CAS2
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Position
NC_008585:<8798..10201
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AA seq
467 aa
AA seq
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SYIRSQAIPPRRPSLQENLLSYESRNFNFIKCERFSSPKLFGAAMASNLLLKLFDAEKLA
EVRQSVISISEANIAKWLLKRDASQVKALMTDLDRDFDIMDDISRFKLMVKRDAKVKLDD
SCLSKHPPAQNIMFHRKALNAVYSPCFDEFKNRFLYCLPPNIVFFTEMTNEDLAEIIRRR
LGDDDIYNIGEVDFSKFDKSQDVFIKEYERALYEAFGFDVELLEMWMEGEYNAYASTMDS
QLSFRIENQRRSGGSNTWIGNSLVTLGLLSMYYDVSKFRLLLISGDDSLIYSDEKIKDHS
SQICLETGFETKFLSPSVPYFCSKFVVQTGSMTYFVPDPYKLLVKLGGSTPFVTDVDLFE
AFVSFRDLTRAFDHQVMLERLCGLVHTKYCFTSGSTLPALCAIHCIRANFSSFKKLYPKT
VGWWLVTSSRLKFLSKLPGLIVSKAFSSTGESNYFCYLRDSFADDPG
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
agctatatccgctctcaggcgatcccccctcggagaccctcgttacaagaaaacttgctc
tcctatgaatcaagaaattttaattttatcaaatgcgagcgcttctccagtcccaaactc
tttggggctgccatggcttcgaacttgctgctgaaactttttgatgccgagaagttagcg
gaggtgcgtcagtccgttatctccatctccgaagctaatatagccaagtggttgctgaaa
agggatgcttctcaggttaaagctctcatgacggatctcgatagggattttgatattatg
gacgacatttcgaggttcaaactaatggtaaaaagggatgcaaaagtgaaactggatgat
tcttgtttaagtaagcatcctcctgctcaaaacattatgttccaccggaaagctttaaat
gccgtgtactccccttgctttgacgagttcaagaaccggttcctctattgtcttcctcct
aacattgtcttctttaccgaaatgaccaacgaagatcttgcggagataataagacgccga
ctcggagatgatgacatatacaatatcggtgaagttgatttctcgaagttcgacaaatcc
caggatgtgtttattaaagagtatgaacgtgccctgtacgaagcttttggtttcgatgtc
gagctacttgaaatgtggatggaaggcgagtacaacgcttacgcttctactatggattct
cagctttctttccgcatagagaatcagcgtcgttccggcggttctaacacttggattggg
aactcgttagtgactctgggtttgctttctatgtattacgacgtttccaagtttcgcctt
ctgttgatatcgggagacgattccttaatctattcggatgagaagatcaaagaccatagt
tctcagatttgtttggagacgggttttgagaccaagtttctctctcctagtgtcccctat
ttctgttcgaagttcgtggtgcaaaccggttctatgacttatttcgttcctgatccgtac
aaacttctcgttaagctcggagggtctaccccttttgtgactgacgtcgatctctttgaa
gctttcgtttctttccgagatcttactcgggctttcgaccatcaagttatgctggaacgc
ctttgtggtttagttcacaccaagtactgcttcacttccggttccactctacccgccttg
tgcgccattcattgcattcgcgctaatttctcttcttttaagaagttgtatcccaaaacg
gtcgggtggtggttagttacttcctctcggctgaagttcctcagtaagcttccaggtctc
atagtttcgaaggctttctcatccactggtgaaagcaactatttctgttatttgagggat
tcttttgccgatgaccctggctag
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