Viruses: 5130565
Help
Entry
5130565 CDS
T40000
Symbol
ToTV_sRNA2gp2
Name
(RefSeq) Tomato torrado virus; polyprotein
Virus
370833
Tomato torrado virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
3A
Waikav_capsid_1
Motif
Other DBs
NCBI-GeneID:
5130565
NCBI-ProteinID:
YP_001040018
RS:
NC_009032
UniProt:
A1XIQ1
LinkDB
All DBs
Position
NC_009032:702..4298
Genome browser
AA seq
1198 aa
AA seq
DB search
MMMSSVAGQRKGPSDKSAAVSEQLIAQITAAVEAGNKNLLRKLGMGSYGILYGAQEKKAM
ELFDPEDVHNITSLWSSFKKTFTSSRDHGNLFFHLYGVMFFMVPHVHGGEGSVKISLCSS
NDPTNPVLQEKVLYFSGGAQAVLMSPTITLPFVKRGPMFYYTMECLGTRAQIPCSVVAIW
KQKIDIRSAIYSKQETMSWAIEALHRPQFFQDRQEAAQYISSVYSNATSSATDSVLPFVG
AQLGDTKMNVPSEARMIRSSSLRVPMLKVQSKRFSSMEIPSTSTAHLLGTTRDETVIQEE
SRYEEEGDDGVLFPVKKAQGLNYSHVWDNLGIESFVDVELPENWDELSVRQQVAAAMIAF
ANKGVCLVPKHIINRDKHNIHLENITEHNYLVILERYGIVNAGSLARTENWYNLTLAQRV
EELIYQRDDAYFMFGDNTNPYPPFDCYDGLTLKVRSELERVAKEQARQRFYKEAARAQVK
NKVAQTSVEEIPSTSFATKVAMESGSVDSMKIAIQAEAANEAVRPNEVMFEFGQEMNNEG
ATELELQQPACVASNSFFNVGVFEFAWKKSSSVAAEVLSLALPAALFGKSKEMSMGSQML
RYYDAALIMYKVILYISGMGAISGQLALVWDECNVLNRKKEFINIASLYASKHRLVSASE
QSSGEFCFTPTGIGKFVPLDPASGAYDLGSIRVFVTHPLASATELESIPCHIHLQCKVLS
TNIMQPPRLRAQAQFGMKPDQTHFPRFPTNQVLLHYNWGVAASMGTTLVSIFSPSGIYES
DGTLQPSLLGNIARNCKWWTGTCVFEICIEKTQFHSGSLAIGLGTLNTSMSTPHDILNMP
HVICNLEMGRKFYFRCTITNWNGKNLLTTGRKSSLPRPKHMSHMRLFATVLKPLVSTSIH
LDTVGVTVQLKCIEDLVLGGTVSVKPIYGHWTKGKNAVDFLFSEMDLSQRKEIEKLRKEN
VETFDEKGKKQPQVQVPLRDKFSYGAVQYFVMNWKDEERLLVLPCAPWSVRFPQGALVQE
AITCPFIDWCSSFCYWSGSLEYTIIVHRVQTSNNIGGVLNITLDSSGYPFPLGISKGTYV
VSAGGGAKWAFTYGMSDNIFSFVVHDDEFFPRRHTKARAIDPNASRIMTLQDRLGNLIIN
LPAKDVISSLEILVKPGPDFKLQLAQAPSANHEKHLGDMQTHTYLYTPDFSELRSFEN
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgtcttcagtggctggacagaggaagggcccaagtgataaaagtgcagctgta
tctgagcaattaattgctcagattacagctgcagttgaagcaggcaacaaaaacctgctt
cgcaaactgggcatgggttcatatgggattctctatggcgcccaagagaagaaagccatg
gaactgtttgaccctgaggatgtacataatataacctcattgtggtcttcatttaagaaa
actttcacttcctcgagggatcatggaaatctattcttccatttgtatggagttatgttt
ttcatggttcctcatgtacatggtggggaaggtagtgtaaaaattagtttatgttccagt
aatgatccaaccaatcctgttctgcaggagaaggttttgtatttttccgggggggcacag
gcagtgttaatgagtccgaccattacactaccttttgttaaaagaggccccatgttctac
tacacaatggagtgccttggcactcgggctcaaattccttgctcagtagtggccatttgg
aaacaaaagattgatatccgtagtgccatttactcaaagcaggaaacaatgtcttgggct
attgaggctcttcaccgacctcaatttttccaggatagacaggaggcagcacagtacata
tcatcagtatattctaatgctacctcctcagcaactgattcagtgcttccgtttgtggga
gcacagcttggcgacacaaagatgaatgtgccaagcgaagcaagaatgatccggtcctcc
tcgctccgggtgcccatgctcaaggtgcagagtaagcggttttcctcaatggaaatacca
tctacctcaactgcacacctccttggcacaacgcgtgatgaaactgtaatacaggaggaa
agtaggtacgaagaggagggtgatgatggggttttgttccccgttaaaaaggctcaaggt
ctgaactattcccatgtgtgggataatcttggtattgagtcctttgtagatgttgagctg
cccgaaaactgggatgagctgtcggtgagacagcaagttgctgcagcaatgatagcattt
gcaaacaagggtgtttgcttggtcccaaaacatataatcaaccgggacaagcacaatatc
cacttggagaatatcaccgagcacaactacttggtgatactggaaaggtacggcattgtg
aatgccggctctctggccagaactgaaaactggtacaatcttaccttggcacagagagtg
gaagagctaatttatcaaagggacgatgcatatttcatgtttggtgataacaccaaccca
tatcctccctttgattgttatgatggcttaacgctcaaagttcgcagtgagctagagcgt
gtggcaaaggagcaggcgcgccaaagattttacaaggaggcggccagggctcaggtgaaa
aacaaggtggcccaaactagtgtggaagaaataccatccacctcattcgccacaaaggtt
gccatggagagtggcagtgtggatagcatgaaaattgctattcaagctgaagctgccaat
gaagctgtaaggcccaatgaagttatgtttgaatttgggcaagaaatgaataatgaaggt
gcgacagagctggaattacaacaaccagcctgcgtggccagtaactccttcttcaatgtt
ggagtttttgagtttgcatggaagaaaagcagttctgttgctgctgaggtgctatcactg
gcgctccctgcggctctctttggtaaatccaaggagatgtcaatgggatcgcaaatgcta
aggtattatgatgccgcattaattatgtacaaggtcatcttgtatatttccggcatgggt
gcaatttcgggtcagctggccctggtttgggatgagtgcaatgtgctcaacagaaagaag
gagttcatcaacattgcctctctgtatgccagcaaacataggctggtttcagcatctgaa
cagagtagtggggaattttgttttacacctacgggtatcggcaaattcgttccacttgat
ccagcctcgggggcttatgatctgggtagcatacgggtgtttgtgacgcaccccttggct
agtgctactgaattggagagcataccttgtcacatccatctgcagtgtaaagtgttgtcg
accaacatcatgcagcctcctcgtttgcgagcacaggcacaatttggtatgaaaccagac
cagacacactttccacgatttccaacaaatcaggtactgttacactacaattggggagtg
gctgctagcatgggtactaccttagttagcatcttctctccgtcaggcatatatgaaagt
gacggtacgctgcaaccatccttgcttggaaacatagcacgcaattgcaaatggtggact
ggcacttgcgtgtttgagatttgtattgagaagactcagttccattctggtagtttggcc
attggactgggtacactgaacacaagcatgtccacccctcatgacattttaaatatgccg
catgttatttgtaaccttgagatgggacgaaagttctatttcaggtgtacgataaccaat
tggaatgggaaaaatcttttgaccactggtcggaagagttctctaccgcggcccaagcat
atgtctcacatgaggttgtttgctacagtcttgaaacccctggtatcaacttcaatacat
ctagatacggtcggggtaacagtgcagcttaaatgcatagaagatttggtccttgggggc
actgtgtctgttaaacccatttacggacactggactaaaggaaagaatgctgtggacttc
ctattctctgagatggacttgtctcagcgcaaagaaattgagaaattacgcaaggaaaac
gttgagacatttgatgagaaaggaaagaagcagccacaggtacaagtgccgctcagagac
aagttttcatatggggctgtacaatattttgtgatgaattggaaggacgaagagcgactg
ttggttttaccatgcgcaccctggtccgtaagattccctcagggggcactggtacaggag
gccatcacatgcccattcattgattggtgctcttccttctgttattggtctggaagtctt
gaatacaccattattgtacatagagtgcagacttccaataacataggaggagtgctgaac
atcaccttagattcatcagggtacccttttcctcttggaatctcaaagggcacctatgtt
gtctctgctggtggaggagcaaaatgggctttcacttatggtatgagcgacaacatcttt
tcttttgtggtgcatgatgatgagttttttcctagacgccataccaaagccagagcaata
gatccaaatgcttcaagaataatgactctgcaagatcgactaggaaatctcataataaat
ttaccagccaaagatgtgataagctctctggaaatcttggtcaagccaggacctgatttc
aaattgcaactggctcaagctccttcagcaaatcatgagaagcatttgggtgatatgcaa
acgcatacctacctttatactcctgatttttcagaactaaggagttttgaaaattaa
DBGET
integrated database retrieval system
