Viruses: 5140998
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Entry
5140998 CDS
T40000
Symbol
LVX_gp1
Name
(RefSeq) Lily virus X; replication protein
KO
K26615
Alphaflexiviridae RNA-directed RNA polymerase
Virus
12194
Lily virus X
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Vmethyltransf
Viral_helicase1
RdRP_2
AAA_16
Motif
Other DBs
NCBI-GeneID:
5140998
NCBI-ProteinID:
YP_263303
RS:
NC_007192
UniProt:
Q4LD46
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All DBs
Position
NC_007192:74..3970
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AA seq
1298 aa
AA seq
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MALISQALDRFTDVSLKAVIQEEQLQNLRTTLRQANTIMPYAASTSAATALESLGILTNP
YSVSLHTHAACKAIENQLLAIVGRLLPQSPVTFYFLKRSKLNALGRNPRLKDVFNNATIE
PRDFARYEPDTLREHLVAPTTPIVYISDTLHFLPMSFVASLFAHNPVVQTLYATVVLPPE
ALYKHPTQLPDIYSINYDYGGFQYIPGAHGGGAYHHEFSTLDWLKVGHILNKGSGEYVTC
QMIESLGANHLMVFRRGKLLTPRVRTFRKDEYVLLPKLFHPKQANSSKPIAMTFAMQLLL
YVKSIKEVTFRDVCAKIRQLIPTSELHRHQPDEIIHIANFFYFVGHRDAICHSHHLMDDG
IITQGFHEIMARVKTVWEKVFGRSHFSQVIALLEWKTFTYSIEPETFTVDDKNPLAQLTN
GEADPWQLPTVDDVGDNGDDEVELIEKLPCAPTTTPVAPAATTGDELPWSQCAHILQSCG
FRGDQRQYKDGELIYPIESILQLPNEPCPKAPAGLISKLESLRRHAVLVTLSPARGHAFA
SDVKNNRIGMCTRNESTEWKKNFDTRVELGQRTIPVIVIHGAGGSGKSYAIQDFLRTQSH
GYDKVGLVLPTVELRADWMAKIPKMSERHFRTYEKALIQHSPGTVVMDDYTKLPAGYIEA
FCLFHPEVHTLILTGDPKQTSHHETNDQALIAHLEPAHVVFSSHCRYYLNATHRNRQDLA
NMLGVYSETSGVTRITCSSLVMGGWPIIAPSLAKKTCLTELGHRAYSYAGCQGLTTPSVQ
VLLDNNTPLCSPAAMYTTLSRARDAIHFINTGPDSREQWAKLDATPYLKTFLDLARGVAA
QRVTPPAASEPAPVPPPVTHFPVENRDMLLEPLIAQLPDKYDRELRDSRHGYTNAIQTDD
TVVQLFQHQQAKDEALLFQTIEARIKLATPADNEKEMLMKRDIGDILFLNYQKAMKLPVD
PIPFSKELWQACREEVQDKYLQKPLANLINGKDRQSPDFPKDKIALFLKSQWVKKTEKIG
AIKVKPGQTIASFMQDTVMVYGTMARYMRRIRRAYQPDNIFITCENTPEELNEWAMEKWC
FRGNAHSNDFTAFDQSQDGAMLQFEVLKAKHHCIPPDIIESYIMLKTNAHIFLGTIAIMR
MSGEGPTFDANTECAIAYHHTKYQVEQGTAQLYAGDDMAQDTTPILKPSFRLIADGIELK
SKEVTHTQVPGEYATFCGWCVTPKGIIKEPRKLFASLQLAKHIGKTAEVKTNYAHDLAHA
YRLGDELQDVLTPDEAAFHQATVRDLVTMGGVDFQWHP
NT seq
3897 nt
NT seq
+upstream
nt +downstream
nt
atggctttgatatcacaggccctcgatagattcacagacgtgtccctcaaggcagtgatc
caggaggaacaattacagaacctccgcaccacactgcgccaggcgaacaccatcatgccg
tatgctgcgtccacatcagcagcaaccgctcttgaatccctagggatactgacgaaccca
tactcagtatctctccacacccatgccgcctgtaaagccatcgaaaaccagttgctggca
atcgttggccgactactcccgcaaagtcctgtcaccttctacttcctaaagcgttccaaa
ctcaacgctctaggtcgaaaccctcggctcaaagacgtctttaacaacgccaccattgag
ccccgcgactttgcccgctacgagccagatacccttcgggaacacctcgtagccccgacc
acgcccatcgtatacatatccgacactctccactttttaccgatgagcttcgtggcctca
cttttcgcccacaacccggtggtacaaaccctatacgccaccgtggtacttcctccagag
gccctgtacaagcatccaacgcaactgccggacatatactctatcaattatgattacggc
ggcttccagtacatccctggagctcatggtgggggagcctaccaccatgaattctcgact
ttagattggctcaaggtcgggcacatactcaataaagggagtggtgagtatgtgacttgt
cagatgatagagtcccttggggccaatcatctgatggtttttaggcgtgggaaactcctc
actcccagggtgaggacattccggaaagacgagtacgtgctactccccaaacttttccac
cctaagcaagccaactcttccaagcccatagctatgaccttcgctatgcaattacttcta
tacgtgaagagtattaaagaggtcaccttccgcgacgtctgcgcgaaaatcaggcagctc
atacccacttctgagctccacagacatcaacccgacgaaataattcacatagcgaatttt
ttctacttcgtcgggcaccgagatgccatctgccacagccatcatcttatggacgatggc
atcatcacgcaaggattccacgaaatcatggctagagtcaagacggtctgggagaaggtc
ttcggcagatcacacttctcccaggtcatcgccctactagagtggaagaccttcacctac
tccattgagcccgaaaccttcactgtagatgacaagaatccgttggctcaacttactaat
ggagaggccgacccatggcaacttcccacggtggatgacgtcggcgacaacggggatgat
gaggtggagctgattgagaagcttccgtgcgcgcccacgacgactccagtggcaccggcc
gcaaccacgggcgacgaactcccttggtcccaatgtgcacacatactgcaatcatgcggt
ttccgaggggaccaacggcagtacaaagatggggaattgatataccccattgagtccata
ctccagctgccaaatgaaccatgcccaaaagccccagctggtttaataagcaagttagag
agcttgcgccgccacgccgtgctagtgactctctctcccgcacgcggccatgccttcgcc
tctgacgttaaaaacaataggataggcatgtgcacgcgtaatgagtctaccgagtggaag
aaaaacttcgacactcgtgttgaactcggccaacgcaccattcccgtgattgtcatccac
ggtgcgggtggctctggaaagtcctatgccattcaggactttctacgtacccaatctcac
gggtatgataaggtgggcttggtgctgcccaccgtggagctgagggccgattggatggcc
aagataccgaaaatgtctgaaagacatttccggacctatgagaaggccctcatccagcac
tcgcccggcactgtggtcatggacgactacactaaactgcctgccggatacattgaggcg
ttctgcttattccacccagaggtccacaccctgatacttaccggggaccctaagcagaca
tcacaccacgagacgaacgaccaggctctcatagcacatctagagcctgcccacgtcgtg
ttctcgtcacactgtagatactacctgaacgccacccatcgcaaccgccaagacttggcg
aacatgctaggcgtctacagtgaaaccagtggggtgactcgcatcacctgctcctcactg
gtcatgggagggtggcccattatcgcgccatccttggcaaagaaaacctgccttactgag
ttgggccatcgcgcttattcatacgcaggttgtcaaggactcaccaccccctctgtgcag
gtgttgctggacaacaacacccccctttgctcccctgctgccatgtacacgacactatcc
cgggcccgggacgccattcatttcatcaacacgggcccggactctagggaacagtgggca
aagctggatgccaccccgtacctcaaaacgttcttagacctggcgaggggtgtggccgca
cagagagtaactccaccagcagcgtctgaacccgccccagtcccaccgccagtcacccac
ttcccagtggaaaatagggacatgctgctggagccactgattgcccaactgcctgacaag
tacgaccgtgagctacgtgactcacgccatggctacaccaatgccattcagactgatgac
acagtcgtacaactcttccagcaccagcaggctaaagatgaggccctactgttccaaact
atagaggcccggatcaagctggccacaccagctgataacgagaaagaaatgcttatgaaa
cgggacattggggacatactgttcctcaattaccaaaaggccatgaaactgcccgtcgac
ccaattcctttctccaaagaattgtggcaagcatgccgtgaggaggtccaggacaaatac
ctgcagaaacccttagccaacctcattaacggcaaagaccgccagtcccccgattttcct
aaagacaagatagcgctcttcctgaaatcacaatgggttaaaaagactgagaaaatcggg
gccatcaaagttaaacctggacagactatcgcgtctttcatgcaggacactgtcatggtc
tatggcaccatggcaagatacatgagacgcattcgcagggcttatcaacctgataatatc
ttcatcacctgcgagaatacacctgaagagctcaatgagtgggctatggagaagtggtgc
ttcaggggaaatgcccactccaacgatttcaccgccttcgatcaatctcaggacggagcg
atgctccaatttgaagtgctgaaggcgaaacatcactgcataccgccagacatcattgag
tcttatatcatgctcaagaccaatgcgcacatctttctgggcactatcgctataatgcgg
atgtcaggcgaaggacccacctttgacgccaacacggaatgtgccatcgcttaccaccat
acaaaataccaggtggagcagggcaccgcccaactctatgcgggcgacgacatggctcag
gacacaacaccgatccttaagccatcctttagacttatcgctgacgggatcgagctgaag
tctaaagaggtcacccatacgcaagttcctggggagtacgccaccttctgcgggtggtgc
gttacacctaagggtatcatcaaagaacccaggaaactctttgcctcactccaactggct
aagcacattggcaagactgcagaagtcaaaacaaattacgcccatgacttggcccatgca
taccgcctcggtgatgagctgcaagatgtcctcacccctgatgaggccgccttccaccaa
gctactgtcagagacttggtgaccatgggaggcgtcgacttccaatggcacccctaa
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