Viruses: 5141573
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Entry
5141573 CDS
T40000
Symbol
DVS_gp1
Name
(RefSeq) Daphne virus S; replicase
KO
K26628
Betaflexiviridae RNA replication polyprotein
Virus
216614
Daphne virus S
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Vmethyltransf
RdRP_2
Peptidase_C23
Viral_helicase1
2OG-FeII_Oxy_2
AAA_22
AAA_30
AAA_14
Motif
Other DBs
NCBI-GeneID:
5141573
NCBI-ProteinID:
YP_595727
RS:
NC_008020
UniProt:
Q5GR23
LinkDB
All DBs
Position
NC_008020:75..6089
Genome browser
AA seq
2004 aa
AA seq
DB search
MALTYRSPMEEIMTVYDTSIQGAIAGISANHYKDCETRDFKFFCYALEPEAKKNLTNAGI
YLSPFSAMPHSHPVCKTLENYLLYKVLPSVVDNSFLFVGMKQFKLELLKARNSNLSMVEV
INRYVTSADRVRYDSTFVIRRSKPIGGLKRHAPGLESAPLKELVPEIMARSAKHLFLHDE
LHYWSHRDLITMLEVLKPDKLLGTLVYPPELLCGSTSSLYPWCYDFEVLGKDFFFYPDGV
RSEGYLQPLKGGFLLSTSKIHLSTGEVYCVDVIQSKFAHHLVCLTKGDAIALKFRSFGEF
AATGCKGLSPMTKGLGSFIPVSYPIISRIYRYLRSLKKPDVQSAMSKLSQLVPEPTGIEI
KFIQDFANFVIETSTINSMIVPSRLKLFMGKWLKNLPGFIAQRFETARGVCLDDFVMSMA
PYTYTCRLTEIDWSTEYYLELAGRCEAEFEQDVPENMDRKYLYGPEGAKDRRGAEPYTGL
AKWADGRSPVICVHKSHLTSMMARKTIESFLCERERKVSRKRVVAELRTWLCDIRTSLIF
PITHTLEMLDDVLQVDSLIRKILMLQRRRASLLFVDIGALWFLSNFRGFQLKLTNYSEAK
VLPREAGELWAVVVAEIGNGDLRKGLKRKYYYHASAHAGKQGRTQDAVQETWSEGASSSC
GECNVQKYVSCACGVTMELKSPVETLDHLFQAPDPLRGRRAGWYSRDGHDYNYTGASHKS
LGWAAWMDEWLKVLDLDPNYYNSCLYQVYEADATLNWHSDDESLFEKGGRIATVNLSGSA
VFHVKCMNGCRANELVGFGVFEMPADFQSTHKHKLSNPSNGRESVTFRRTAQQSVTTGSE
NFSNHEGGESNQEVVDVRVADEFTMGVERSDGSSASSSEGVKNDELIFKRHYAGVNIESG
ICHDDRMKKIIKVPGDGDCFWHCVSRVMSNELRLTKEKAGRVDLGSESLNDALQHQMGEQ
VYAQDEAIAATSVCFSARINVYQPAECVLTKFIPTSGVKHEINLINEFDHFSIVEPANCC
VPRAIAAAYKRSLSEILAVIREHCDESVSSEIWNGEGVNEMHMLLLFECFDIRADVVQQG
VSTVFNEAGRVRFSFHLEDKHLTFLEKDKLASAPSLRYERPELSLPLASQHVLAQIASKL
TYKATELRAKVLSRSLFEGTTGVISSNLFNGRLDLMQHGETPPKEKSRDVYCLMGTFGAG
KSTHLANFFKMNKGRMITYVSPRKVLAEDFEKRIGLERKEKGQGREAAGQRKKLGQEHWR
VKTFEQALLEHTKIREGSCLILDEIQLYPPGYLDLMCYLVPDRTIIAVAGDPCQSDYDNE
KDRFIFSAMEADFMVLLKDQEYKYMVRSLRFQNQIFSGRLPSKLCIPQSAGVIEYGLYTG
VEAFGYEDVIGARNYLVSSFEEKKIIETFCVKQVNVLTFGESTGMTFDGVNIVLTSASFG
ASERRWLTALSRSRKIINFINLGHFDWNALATCYKGRFLASFLAGTAKVEDLLQYLPGKP
IFVDNLDGKIGKDEGIKEEKLAGDPWLKGMIDLGQTEDIEEIELEEAILQEPWFKVHLPR
AELESIRARWEHRFKAKEHREVRMGYLVSEQFTDEHSKQKGKELTNAATRFEAIYPRHKA
SDTVTFIMAVKKRLRFSQPAKEMGKLLEARLYGKFLLEQFLKHVPLKKAHNPEMMAQAKA
AFELKKTSKSAATIENHANRSCRDWLIDVGLIFSKSQLCTKFDNRFRDAKAAQSIVCFQH
EVLCRFAPYIRYIEMKLNEVLPDRFYIHSGKGLEELNDWVLKHDFSGVCTESDYEAFDAS
QDQYIVGFELAVMEYLGLPRDLINDYIYIKTHLGSKLGSFAIMRFSGEASTFLFNTMANM
LFTFLRYEIHGNENICFAGDDMCASKRLQVKNIHAKFLSKLKLKAKVDFTSHPTFCGWNL
TKYGIYKKPQLVLERLCIAKETNNLINCIDNYAIEVSYAYKLGELALCEMNEEEAEAMYN
CVRIIVKNKHHLKSSISDLFQEIP
NT seq
6015 nt
NT seq
+upstream
nt +downstream
nt
atggcgctaacttaccgaagccccatggaggagataatgactgtttatgatacaagcata
caaggtgcgattgcaggcatctcagctaaccactacaaggattgcgagacccgagatttc
aaatttttttgctatgccttggaacctgaggctaagaagaatttgaccaacgccggaatt
tatctcagtcctttttccgctatgccacattcgcatcctgtctgtaaaaccctagagaat
tacttattgtataaagtactgccgtctgtagtagataatagttttctttttgtaggtatg
aaacagttcaaattagagttgttaaaagctagaaatagtaatttaagcatggtcgaagtg
atcaatagatatgttacgagcgccgacagggtgagatacgattccacttttgtcatcaga
aggagcaagcccatcggggggttgaaaaggcacgcgcccggattggaaagtgcgccgctc
aaagaattagtgcccgaaataatggctagaagtgcaaagcatttattcctacatgatgaa
ctgcactactggtcacatagggacttaatcacaatgttagaagtgctgaagcctgataaa
ttattgggaaccctagtgtacccgcctgaactgctatgcggctcaacttctagcttgtac
ccttggtgttatgattttgaagtgcttgggaaagatttctttttttatcctgatggagtg
cgatctgaggggtatttacagcccttgaagggtggcttcctacttagcacttccaagatt
catctctcaactggagaggtatactgtgtcgacgtgatacagagcaaattcgcacatcat
ttggtgtgtttgactaaaggggatgctatcgcactcaagtttagatcattcggtgaattt
gctgcaacggggtgtaagggtttgagtccaatgactaaaggtttgggttcatttattcca
gtaagctatccgattatttcgcgaatatacaggtatttgcgatcacttaagaaacccgat
gtccaatctgctatgtctaaattgagtcaactagtacctgagcctacgggtattgaaatc
aaattcatccaagactttgccaattttgtcattgagacgagtaccattaattcgatgatt
gtgccctcacgtttaaagttattcatgggaaaatggctcaaaaaccttccagggttcatt
gctcagcggttcgaaacagcacggggggtttgccttgacgattttgttatgagtatggcc
ccttacacttacacgtgtagattgactgagattgattggagcaccgagtattacctcgag
ttggctggcaggtgcgaagcagaatttgagcaggacgtacccgagaatatggatcgtaag
tacctatatggtccagaaggtgccaaagatagacgaggagcggaaccgtacaccggcctt
gcaaaatgggcagatgggcgctcacctgtaatttgtgtgcacaaatcgcatttgacgagc
atgatggcccgaaagacgatcgagtctttcctctgtgaacgtgagcgcaaagtgagcagg
aaaagagttgtcgctgaattgcgaacttggttgtgtgatattcgtacaagcctcatcttc
ccgattactcacacgttggagatgctggacgatgtgctgcaggtggacagccttattagg
aaaattctcatgctgcaacgcaggagagcaagtttactctttgttgatatcggagcactc
tggtttctctcaaatttcagaggttttcaactgaagcttactaattactctgaagcaaaa
gttttgccgcgagaggcgggtgagctttgggccgtcgtggttgcagagattggcaatgga
gatttgcgtaaaggactgaagcggaaatactactaccatgcaagtgctcacgctggaaag
caggggagaacacaagacgcagtgcaggaaacttggtccgagggagcgtcaagctcatgt
ggcgagtgcaatgttcagaaatatgtgagctgtgcgtgtggtgtgaccatggaattaaag
agcccagtggaaacactggatcacctatttcaagcaccagatcctcttcgtggacggagg
gcaggttggtactccagggatgggcatgattacaactatactggggcttcacacaaaagt
ctgggctgggctgcatggatggatgagtggctaaaagtgcttgatctggaccctaattat
tataatagctgtctctaccaggtttatgaggcggacgccaccctgaattggcattctgat
gatgaaagtctctttgagaagggtgggagaatagcaacagtgaatttatcaggcagtgct
gtattccatgtcaaatgcatgaacgggtgcagagctaatgagttggttgggtttggggtg
tttgagatgcccgctgatttccaaagcacacacaaacacaaattgagcaacccaagcaat
ggtagggaatctgtcacattcaggcgtacagcacagcagagtgtgaccacggggagcgag
aattttagcaaccatgagggtggcgaaagcaaccaagaagtcgtggatgttagagttgca
gatgagtttactatgggtgttgagaggagtgatggctcttctgcgagtagctctgagggt
gttaagaacgatgagctcattttcaaaaggcattatgctggagtgaatattgaatcgggt
atatgccatgatgatcggatgaagaaaatcattaaagtgcctggtgatggagattgcttc
tggcattgtgtttcgagagttatgtctaatgagctgagacttaccaaggaaaaagctgga
agagtggatctgggcagtgagagcttaaatgatgcgctgcagcaccaaatgggcgagcaa
gtttatgctcaagatgaagcaattgcagctacatctgtttgctttagcgccagaataaat
gtttaccaacctgctgagtgtgtcttgacgaagttcataccaactagtggagttaagcac
gaaattaatttgattaatgagtttgatcacttcagtatagtcgaacctgcaaattgttgt
gtaccgcgcgcaatcgctgcagcttacaagagatcattaagtgaaatacttgctgtcatt
cgtgagcattgtgacgagtcggtatcttctgagatctggaacggggaaggtgtgaatgag
atgcatatgttgctgctttttgagtgttttgacatacgtgctgatgttgttcagcaagga
gtctctaccgtgtttaacgaagcagggcgtgtgagattttctttccatttggaggataaa
catctcacttttttagaaaaggataaacttgctagtgcaccttcactccgatatgaaagg
cctgaattgtctttgccattggcttcacagcacgtactggcacaaattgcctcaaaattg
acctacaaggcaactgaattgcgtgcgaaggtactaagtaggtctctatttgagggtaca
accggggttattagctccaatttgttcaatgggagacttgatctcatgcagcatggtgaa
accccacccaaggagaaatcaagagatgtgtactgcctcatgggcactttcggcgcgggc
aagagcacccacttggcaaattttttcaagatgaataaaggcagaatgataacatatgtt
tcacctcgcaaggtgttggctgaggatttcgaaaagaggattggtttggagcgtaaagaa
aaggggcagggaagagaggccgcgggccaaaggaaaaaactagggcaagagcattggcgt
gtcaagacgtttgagcaagcgttgctagagcacacaaagataagggaaggatcttgctta
atacttgatgagattcaattgtatccaccagggtatttggaccttatgtgctacctagtt
cctgatcggacaatcattgcagtagctggagatccctgccagagtgactatgataatgag
aaagatcggttcattttctcagctatggaggcggatttcatggtgctgttgaaggatcag
gagtacaaatacatggtgaggagtttgcgtttccaaaatcaaattttttctggaagattg
cctagcaagctttgcattccacaatcggctggagtcattgagtacggtctgtacacaggc
gtggaggcattcgggtacgaagatgtgattggcgcacggaattacctcgtctcttctttt
gaagagaagaaaatcatagagacgttctgtgtcaagcaagtgaatgtgttaacatttggg
gaaagcaccggcatgacatttgatggtgtgaatattgtgttaactagcgcctcgtttggt
gcttctgaaagacgctggttgaccgcattgtcacgctcaaggaaaattatcaatttcatc
aatttgggccactttgattggaatgctttggcaacttgttataagggcagatttttagct
agtttcctagctggtacggccaaagtggaggatttgttacagtacttgccaggtaaaccg
atttttgttgataatctagatggaaaaattggcaaggatgaaggcatcaaggaggagaaa
ttggctggagacccatggctgaaaggtatgatcgatcttggtcaaactgaggacattgaa
gagattgaacttgaagaagccatcctgcaggagccctggttcaaagtgcacctgcctaga
gcagagttagaatcgataagagctcgatgggagcataggttcaaggctaaggagcatcgt
gaggtgcgaatgggctatttggtttctgagcaattcacagatgaacatagcaagcaaaag
gggaaagagttgacgaatgctgctacgcgattcgaagctatctacccaaggcacaaagcg
agcgacactgtgaccttcattatggctgtgaagaagagactcaggttctcacaacctgca
aaagaaatgggcaaactgcttgaagcgcgcctgtatggtaaatttttgctagaacaattc
ctcaaacatgtgccgctgaagaaagctcacaatccagaaatgatggcacaagccaaggca
gccttcgagttgaagaagacgagcaaaagtgcagctacaattgaaaaccacgcaaatagg
tcttgtagagattggttgatagacgtgggactgatcttttcgaagagccaactctgcaca
aaatttgataatcgttttcgtgatgctaaagctgctcaaagcatcgtttgtttccagcac
gaggtattatgccgctttgcaccctatatacgttacattgagatgaagctgaacgaggtt
ttacctgatcggttttacattcattctggcaagggcttggaagagttgaatgattgggtc
ttgaagcatgatttctcgggtgtgtgtacagagtctgactatgaagcatttgatgcctcc
caagatcaatatatcgttggttttgagttggcagtaatggagtaccttgggttgccgcgt
gacttgatcaatgactatatctacatcaaaacccatcttggctcgaaacttggcagtttt
gccataatgagattctcaggtgaggcgagtaccttcttgttcaatacaatggccaacatg
ctcttcaccttcctgcggtatgaaattcatgggaatgagaatatttgctttgcgggggat
gatatgtgtgcttctaagcgattgcaggtcaagaatatccatgccaagttcctatcaaaa
ctcaagctgaaggcaaaagtagatttcacaagtcacccaactttttgcggttggaattta
acaaagtatggcatttacaagaaaccacaacttgtgctcgagcgtctgtgtattgcgaag
gagacgaataatttgatcaattgtattgacaattatgccattgaggtctcttacgcgtac
aagctgggtgagttagctctgtgcgagatgaatgaggaggaggccgaggcgatgtacaac
tgtgtcagaatcatcgtaaagaataagcatcacttgaagtcttcgatttctgacttattc
caagaaataccatag
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integrated database retrieval system
