Viruses: 5141643
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Entry
5141643 CDS
T40000
Symbol
AVX_gp1
Name
(RefSeq) Potexvirus ecsalstroemeriae; replicase protein
KO
K26615
Alphaflexiviridae RNA-directed RNA polymerase
Virus
316983
Potexvirus ecsalstroemeriae
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Vmethyltransf
Viral_helicase1
RdRP_2
2OG-FeII_Oxy_2
2OG-FeII_Oxy
Herpes_Helicase
AAA_14
AAA_22
UvrD_C_2
Motif
Other DBs
NCBI-GeneID:
5141643
NCBI-ProteinID:
YP_319827
RS:
NC_007408
UniProt:
Q3V6G7
LinkDB
All DBs
Position
NC_007408:98..5038
Genome browser
AA seq
1646 aa
AA seq
DB search
MSKIRNVLDKIRDPSVQTAICENAYAQMRPVLKEALVNCPYALTDLEADALENMGISVNP
YATQTHTHAACKAIENQMLQIVGHHLPKSKVTFLFLKRSKLRYMRRAAALNDHFMNKNVE
PKDFFRYDSETVCANLSAVSTSIAYISDTLHFMTFEELANLFETSPKLDTLLATVVLPVE
ALHKRTSLHPALYSINYNKDGFEYIPGNHGGGAYFHPYDTLQWLKVRTLLCNSKHKGFPP
FHLTFQMVESLGANHLFIIRRGKFETPLYRTFCRDTYVTFPKIFHPSTANANKPIQKQKA
MQLWLYCKSVKAVTERDIYAKIRQVLRTEELELYEPAEVAHIVNYFYFIANLHSITCYED
LLSGSLLKRMTVPIRTAITKFVEVFRGKNDFVKLLDALKWDNFTYSIKPEDMTTKMDSHQ
VNHLVEEYGIPIKEAEATIAQLHREPELLNDADLDSPPMVDFLGRTTYEPFNYPRTTTPT
DPKPAATTADDSASCSKPPNSAAGTSPSPNHTQPEKLKPDAQPTQDSATIPVHVSGWERE
PFDYVFHTSQSQQLRGRKAAFLSTRQDIDYGHDKIRYDTNPWNEILTDFLRTVGFQANAV
LIQVYEANAGIPWHRDDEKCYEKDAILTLNFGTATFEFSNGTKLHLTDGCHFIMSGEWLD
LKHRVTNCSADRMSLTFRVHKQDMFGHPIPKTTLVPEQQPEVDAGVDNHNLPKETPAQEP
SEASTESGPNTTKPAPFVSQRQNTRSPEEKPTVTAVPWEAWKPLLNNHGFKADEQQLNPE
GFLILPILDVHKVPHSKFPDTVPAKLQDTLTQMKRFPVDITIQHQRAAAYASDIKNNRTG
KLLSSMDNKWKASFAYKMQHEDITLTGTVIHGCGGSGKSHAIQQFIRTIPNDNNTITVVT
PTVELRNDWSTKLPLSPPEMFKTFEKAITQPCNPVVVFDDYTKMPPGYIEAVCMHHRQIE
FVILTGDSKQSVYHEANTEAYISSMIEAVEVFEPFCEFYLNATHRNVKDLANKLGVYSER
QGSLKITMASHHLKQSRIPLLVPSTMKRNAMLDIGHRCMTYAGCQGLTAPKVQILLDQHT
QHCSERVLYTALSRAVDSIHFINTGPNSTDYWQKLDSTPYLKAFIDTHRDEKTEMYNSQP
ADDSPTPVPAPKTHFPPAPSTLLENMVETLPDKEAREIYNKSLGYSNAIQTQDPVVQLFQ
HQQAKDETLYWATIEARLSISTPEANLREFNLKKDVGDVLFANYAQIMHLPSEPVPFDDR
MWEISETEVRNTYLSKPIGNLVNAATRQSPDFNPNKIALFLKSQWVKKPEKLGALKVKPG
QTVASFMQETVMLYGTMARYLRKQRQRFQPQNIFINCETTPDHLNEFIKSQWSFTQPAHT
NDFTAFDQTQDGAMLQFEVLKAKFFNVPPEIIEGYIYIKLNAEIFLGTLGIMRLSGEGPT
FDANTECSIAYNATRFFVDDSVAQVYAGDDMALDRVVQEKPSFKRLEHQLKLTSKPQYPS
QTKGDYAEFCGWIFTPSGIMKHSLKMQASIQLQKKINNIAQSARSYALDLKYAYDMGDAL
QDHLTEAECELHAQSVRDMHLLHQHDVLVNGASSPPHPTQTTSAADIPTGSAKTKKRNLS
KRKAKVAKIDSSGDFNFRCPSSPPRQ
NT seq
4941 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaatcagaaacgtgttggacaaaatcagagacccatctgtacaaacagcaatt
tgcgaaaatgcttatgcacaaatgagacctgtactcaaagaggcactagtcaattgccct
tacgcactaaccgatctagaagccgacgctctagaaaatatgggtatatccgtaaatcct
tacgcgacacagacccacacacacgcagcctgcaaagccatcgaaaaccagatgctgcaa
atagtcggacaccacctcccaaagtccaaagtcactttcctctttctgaagagaagtaaa
ctccgctacatgcgcagagctgctgctctcaacgatcacttcatgaacaaaaatgtggag
cccaaagacttcttcagatacgactctgaaactgtatgcgcaaacctcagtgccgtatcc
accagcatcgcatacatttccgacaccctacacttcatgacattcgaagaacttgccaac
ctcttcgaaacgagcccgaagcttgacactctgctagcgactgtagtgctgcccgtcgaa
gctctgcacaaacgaacttcactacaccccgctctgtactccatcaactacaacaaagac
gggttcgaatacatcccaggcaatcacggtggaggagcctatttccatccttacgacaca
ctacaatggctcaaagtgaggaccctactctgcaacagtaaacacaagggtttccctcct
ttccacctcacattccaaatggtagagagtttaggcgccaaccatcttttcatcataagg
cgtggaaaattcgaaacccccctctaccgcaccttctgccgtgacacctacgtcacattc
ccaaaaatcttccatccatccaccgccaacgccaacaaacccatccaaaaacaaaaagcc
atgcagctctggctatactgcaagtcagtcaaagcagtaaccgaacgggacatctatgcc
aaaataaggcaagtactgcgaaccgaagaacttgagctgtacgagccggcggaggtggca
cacatagtaaactacttctacttcatagcgaacctccactccatcacttgctacgaagac
ctgctgtcagggtcactactcaaaaggatgacagtcccaatacgcacggccatcacaaag
ttcgtcgaggtctttcgcggaaagaatgactttgtcaaacttttggatgctctcaagtgg
gacaactttacctacagcatcaaaccggaggacatgaccaccaaaatggactcacaccag
gtcaaccacctcgtggaagagtatggcatacccatcaaagaagctgaagcgaccatcgct
cagctacaccgcgaaccagaactgctcaacgacgcggacttggactccccacccatggtg
gatttcctcggacgcactacatacgagccctttaactatcccagaaccacaaccccgaca
gaccccaagccagccgccacaaccgctgacgactccgccagctgttccaaaccgcccaac
tccgcagctgggaccagcccgagccccaaccacacgcaacccgagaagctgaaacccgat
gcacaacccactcaggactccgccacaatccccgtccacgtctcaggctgggaaagagag
cccttcgactatgtgttccacacatcgcagagccaacaactacggggacgcaaagcagcc
ttcctaagcacccgacaagacatagactacggccatgacaaaatccgatatgacacaaac
ccctggaacgagatactgactgactttctcagaactgtgggtttccaagccaacgccgtc
ctgattcaagtctatgaagctaacgcaggcataccatggcacagagacgacgaaaagtgc
tacgaaaaagatgccattctcacgctcaacttcggcacagccacctttgagttctcaaat
ggcactaagctgcacctgaccgacgggtgtcacttcataatgtcaggcgaatggctggac
ctcaaacaccgggtaacgaactgcagcgctgaccgcatgtccctcactttccgtgtgcac
aaacaggacatgttcggccaccccatcccaaaaactaccctggtgcccgaacaacaacca
gaagttgacgccggtgtcgacaatcacaacctgccaaaagaaacgccagcccaagaacca
agtgaggccagcacagaaagtgggcccaacaccacaaagccagccccattcgtgagccag
agacagaacacgcgctcccccgaggaaaaacccacggttactgccgtgccctgggaagca
tggaagccactcctcaacaaccacggtttcaaagccgatgaacagcaactcaatcccgag
ggcttcctcatactcccaattttagatgtacacaaggtgccccactccaaattcccagac
accgtcccagcaaagctgcaagacaccctcacccaaatgaaacgctttcccgtcgacatc
accatccagcaccaaagagccgcagcctacgcttccgacatcaaaaacaaccgaacaggc
aagctacttagctccatggacaacaaatggaaagctagctttgcatacaagatgcaacac
gaagacataaccctgactggtactgtgatccatgggtgtggaggttccggcaaaagtcac
gccattcaacagttcatccggaccattcctaacgacaacaacaccataacggtcgtcacc
ccaacggtcgagctgcgcaacgactggagcaccaaattaccactctcaccaccagagatg
ttcaagacgttcgaaaaagcgatcactcaaccctgtaaccccgtcgttgttttcgacgac
tacaccaagatgccccccggctacatcgaagcagtgtgtatgcaccaccgccagatcgaa
ttcgtgatactcaccggggacagcaaacagagcgtgtaccacgaagccaacactgaggcc
tacatctcatcgatgatagaggccgttgaagttttcgagcccttctgcgagttttaccta
aatgccacacaccggaacgtcaaagaccttgccaacaaactcggagtctactcagaaaga
cagggttccctgaaaatcaccatggcatcacaccacctcaaacaatcgcgcatcccactg
ttggtgccttccaccatgaaacgcaacgcaatgctcgacataggccaccgctgcatgacc
tacgcgggatgccaaggccttaccgcacccaaagtccaaatcttgctggatcaacacaca
caacactgctcggaaagagtcttgtacactgcactatctagagcggttgacagcattcac
ttcataaacaccgggcccaattcaaccgactactggcagaaactggatagcaccccgtac
ctcaaagctttcatcgacacacaccgagacgagaaaacggagatgtacaactcacaacca
gcagacgacagcccaacgccggtcccagccccgaagacccattttcccccagctcccagt
accctgctggaaaacatggtcgaaaccctccccgacaaggaagcgagggagatttataac
aagagcctagggtacagcaacgcgatccaaactcaggaccccgtcgttcaactgtttcaa
caccagcaagccaaggatgaaacgctatactgggccaccatcgaagcacgactttccatc
tccaccccagaagcgaaccttcgagaatttaacctgaagaaagatgtgggagacgtgctc
ttcgccaactatgctcagatcatgcatctaccctcagaacccgtcccctttgacgacaga
atgtgggagatcagcgaaacagaagttcgtaacacctacctttccaagcccataggcaac
ctggtcaatgccgccacacgacaaagcccagacttcaatccaaacaaaatcgcactcttt
ctgaagtcccagtgggtcaagaaaccagagaaactgggggcgctgaaagtcaaacctggt
cagactgtcgcctccttcatgcaggaaactgtcatgctctacggcacgatggccaggtat
ctgaggaaacagagacaaagattccaaccccaaaacatcttcataaactgcgagaccacg
ccggatcacctaaatgaatttatcaaaagccagtggtctttcacacaacccgcccacacc
aacgatttcaccgcctttgaccaaactcaggatggcgccatgctacaatttgaggttctc
aaagcgaaattcttcaacgttccgcccgaaatcatcgaaggctacatatacatcaaactc
aacgcggaaatcttcctaggcaccctcgggatcatgagactcagcggtgaaggcccaact
ttcgacgctaacacggaatgcagcatcgcctacaacgcaacacgatttttcgtagacgac
tcagtcgcacaagtctacgccggcgatgacatggcattagatcgcgtggtgcaggagaaa
cctagcttcaaaaggctggaacatcagctcaagctcacatccaaaccgcaatacccaagc
caaacaaaaggtgactacgccgaattctgcgggtggatattcacacctagcggcatcatg
aagcatagtctcaaaatgcaggcctccatccagctccaaaagaaaatcaacaacatcgcc
caatcagctcgttcatacgcactggatctgaagtacgcttacgacatgggtgacgcacta
caagaccatctaactgaagctgagtgtgaactgcacgctcaatcggtccgcgacatgcac
ctactccaccaacatgacgtcctagtcaacggtgcttcaagccccccccatccgacccaa
acaacgtcagccgctgacatccccactggtagcgccaagactaagaaaagaaacctatcc
aaaaggaaagctaaagtagccaaaatcgacagtagcggagatttcaatttccgttgcccc
agttcccccccacgccaatag
DBGET
integrated database retrieval system
