Viruses: 5142096
Help
Entry
5142096 CDS
T40000
Symbol
NVX_gp1
Name
(RefSeq) Nerine virus X; replicase protein
KO
K26615
Alphaflexiviridae RNA-directed RNA polymerase
Virus
333348
Nerine virus X
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Vmethyltransf
Viral_helicase1
RdRP_2
MVD-like_N
T2SSE
Motif
Other DBs
NCBI-GeneID:
5142096
NCBI-ProteinID:
YP_446992
RS:
NC_007679
UniProt:
Q2V0S0
LinkDB
All DBs
Position
NC_007679:90..4604
Genome browser
AA seq
1504 aa
AA seq
DB search
MSKVRAALERLNDCSLKAVLQNEAYKEIRPTLREATLINPFAIDDAAADSLESLGIITNP
YAVKLHTHGAVKAIENQMLSIVGHNLPKRPVTYMFLKKSKLRYLRRDPRISDVFQNYEIE
PRDVARYPPETVLKRFTVVNTDVAYISDTLHFLRPTFLTALFERSHNLQTLYATMVLPPE
ALHKLPSLEPNLYQINYSFDGFQYIPGRHGGGAYHHEFKDLQWLRVGKIKGPTTTITCQL
LESMGANHLFVFRRGDLLTPRVRTFRCDEHVTLPQIFHPTNRNASRPIKHTLAAQLLLYC
ESIADLKLKDVFAKVRQLVKTNDLPQLQPTEIVHIANYFYFVGHLGAVNTYEDVLSMSLF
RKVLQPIKTRIIQIWEKLFGERKFEQLMKALNWQTFTLSVQVTCGRSYMYGWDNANIRPD
TLPDFVEDEHTPETETTERPPNPVIAPAVTGFACSPNPSSSSPPPSTHPSTSKSGHKLMY
RPKVKNTPTLTQHKSQVSNQDAATHSGNNTPEQAGQNSSTSTSANAGPAQTQATHKADKG
KATLKEDIPSSSSSGLEAHIIEDYMDTYSRNDAPPLTAEVDPFLRVNEPEPVTNSEKPDQ
QTESSKATCTLETDEPLLNFMSPPDWHIEALNRNAPHHEDDAAHTTSTPERAPEQEITED
LQVSPNNDGKPEEPLPWQPWLNILKSVGFKGNETQLDKLDQIIMPISDVRHLPQPDFVPG
LPHKLFSLLKHIQRLPVQSKISSRRAKCYASDVKNGRTGLLTRHQSDEWKETFSTLTEME
APSTWVSVIHGAGGSGKSQALQEYMRSLKSDQKEITIILPTNELRIDWEGKVPHMNTYAF
KTFERALIEPVEDICVFDDYGKLPPGYIEAFCMLHVNITCLILTGDSRQSVYHETNAQAL
IAHLPHAIMQFEPLCRYYLNATHRNPRNLANALGIYSEAPGRTTITMSSRPMTGWPILSP
SCAKKTCFGEMGHVAHTYAGCQGLTAPKIQMVLDNNTPLCTTEVMYTALSRAVHNIHFIN
TGANSKEYWTKLDATPYLKTFLETVREKVVTEDEPPEPKVREEPVRTHVAPDNENLILEE
LITELPEKHARELYDNHHGHSNAIQTEDPVIQLFQHQQAKDETLLWATIEARIKISSPEA
NLAEFILKRDIGDILFENYAIAMNVPKEPLPFETTLWQACREEVEKTYLAKPVSALINGS
LRQSPDFHPDAISLFLKSQWVKKVEKLGCLHVKPGQTIASFMQETVMVYGTMSRYMRRIR
QQHQPAEIFINCEKNPEDMTQFIKQGWNFKRQAYSNDFTAFDQSQDGAMLQFEVIKAKHY
GVPADIIEGYLHIKMNAKIFLGTLAIMRLSGEGPTFDANTECSIAYHHTRFHVPSNTRRF
FAGDDSAQDCPAVEKSSFQAISGRMSLTSKPVSYAQKPGKFAEFCGWSITPLGVIKDPLK
LYASLELACRTDNKENVAQSYALDAKHAYQLGDALHDILTPEQFVMHQKTIRMLHELKVG
NLLK
NT seq
4515 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaagtgcgtgccgccctagaaaggctcaatgattgttctctcaaagcagtgtta
caaaacgaagcgtacaaagaaatcagacccacactgcgcgaagctacactcatcaatcct
ttcgccatcgatgacgctgctgccgattctctggaaagcttaggtatcatcactaatccc
tatgccgtcaaactacacactcatggagcagttaaagccattgaaaatcaaatgctgtct
atcgttggccacaacctacccaaaagaccggtaacttatatgttccttaagaagagcaag
ctgcgctacctccgacgggaccctagaatctccgacgtcttccaaaactacgagattgag
ccacgcgatgtggcccggtaccctcccgaaacagtgctcaagaggttcaccgttgtaaac
acagatgttgcttacatcagtgacacccttcacttcttaagacccacctttttaacggct
ctttttgagaggtctcacaacttgcagacgctctacgccaccatggtattacccccggaa
gctctgcataaactcccctcactggaaccaaatttgtaccaaatcaactacagctttgat
gggttccaatatataccaggacgccatggtggcggggcttaccaccatgaatttaaggat
ctacaatggttaagagtgggaaagattaaaggacccaccaccaccataacttgccaactt
ctagaatccatgggtgccaatcatctcttcgtattccgacgtggggacctactcaccccc
cgggtacgaacgttcagatgcgatgaacatgtaacactaccccagattttccaccccact
aatcgcaatgcgtctaggcccatcaaacacactctagcagctcaactgttgctatactgt
gagagcattgccgatcttaagcttaaagacgtcttcgccaaagtgaggcagttggtgaag
actaatgatttgccccagcttcagcctactgaaatagtgcacatagcaaactatttctat
ttcgtaggccatctcggcgcagtaaacacttacgaagacgtactgtcaatgtcactattc
cgaaaagtactgcagcctatcaaaacccgcataatccaaatctgggagaagctgttcgga
gaacggaaatttgaacagctgatgaaagcactaaactggcaaacattcaccttgtccgta
caagttacctgcggacgcagctacatgtacggctgggacaacgctaacatcagaccagac
actctccctgacttcgttgaggatgagcacactccggaaactgaaacgaccgagcggcca
ccgaatccagttatcgctccagccgtgactggttttgcttgcagcccaaacccatccagt
agctcgcctccaccatccacccatccaagcacgtctaaaagtggtcacaagttgatgtac
agacccaaagtgaagaatactcccacgctcactcaacataaaagtcaggtatccaatcag
gatgctgcaactcattccgggaataacacgcctgaacaggctggtcagaactcctcaact
tcgacgtccgccaatgctggacctgctcagacccaggccacccacaaagcggataaaggc
aaagccaccctgaaagaagacatcccttcctcttcaagtagtggtctagaagcccacatt
atagaggattacatggacacgtacagccgcaatgacgcgcctcccttgacggcggaagtg
gatcccttcttaagagtgaatgagcctgagcccgtaaccaattctgaaaaaccagaccag
caaacggagagctctaaagccacctgcactcttgagacggatgaaccactgctgaacttc
atgagcccaccagattggcacatcgaagcactcaaccggaacgcgccacaccacgaagac
gatgcagcccacaccacctccacccctgaaagagctcccgagcaggaaatcactgaagac
ctacaagtgagtcccaacaatgacggaaaaccagaagagccactcccatggcaaccctgg
ctaaacatactcaaatctgtgggcttcaaaggtaacgagacacagctggataaactggac
cagattatcatgcctatttccgacgttaggcatttaccacaaccagatttcgtgcccggt
ctcccacacaagctcttctccctgctcaagcatatccaaagattgcccgtacaatccaaa
atcagctctaggcgtgctaagtgttacgccagcgacgtcaagaacggcagaactggcctt
cttacaagacaccagtctgacgagtggaaagaaacattcagtacactcacagaaatggaa
gctccatccacatgggtcagcgttatccacggagcaggtgggtctggaaaatctcaggcg
ctccaagaatacatgcgcagtttgaagagtgaccagaaagagataacgattatattgccc
actaacgagcttcgtatagattgggaaggaaaagtgccccacatgaacacctacgctttc
aagaccttcgaaagagctctgattgagccagtcgaagacatatgcgtgtttgacgactat
ggcaaactcccacccggctacatagaagctttctgcatgctgcatgtcaatattacttgc
ttgatattaacaggtgactccaggcaatccgtctaccatgagactaatgcacaagcgctt
atagctcacctcccacatgctatcatgcagtttgaacccctatgccgatactacttgaac
gccactcatcgcaatccacgcaatttggctaatgcgctaggcatctactctgaagcaccc
gggcgcacaaccataaccatgagctccagacctatgactggctggcccatattatcccct
agctgcgccaagaaaacatgctttggagaaatgggccacgttgctcacacttacgcaggg
tgccaagggctgactgctcccaaaatccaaatggtcctagacaacaatactccattatgc
acaacagaagttatgtacactgcactttcccgtgcagtacataacatacatttcatcaac
accggggccaactcaaaggagtattggactaagctggacgcaactccttaccttaaaact
ttcctggagactgtcagagagaaagtggtaactgaagatgaacctcctgagcctaaagtc
cgcgaggagcccgttcgaacgcacgtggctccagacaatgaaaacttgattctagaggag
ttaatcaccgaactccctgagaaacatgcgcgcgagctctacgacaatcaccacgggcac
tctaatgctatccaaactgaagacccagtgatccagcttttccaacatcaacaagccaaa
gatgaaacgttactctgggccaccatcgaagctaggattaaaatctcctcaccagaagca
aacttggctgagtttatcctaaagcgtgacataggtgacatcctcttcgaaaactatgcc
attgccatgaatgtgcccaaggagcctctgccttttgagacaacactgtggcaggcttgt
agagaagaggtcgagaagacttatctggctaaacccgtgtcagcactcatcaacggatca
ctcaggcaatctcctgactttcaccccgacgctatatcacttttcctcaaatcacaatgg
gtgaagaaagttgagaagttaggctgcttacacgtcaagcctggtcaaactattgcctca
ttcatgcaggagactgttatggtctacggcacgatgtccaggtacatgaggaggatccgc
caacaacaccaaccagctgagatattcatcaactgcgaaaagaacccagaggacatgact
caattcataaagcaaggatggaactttaaaagacaggcctactccaacgacttcacagca
ttcgatcaatctcaagacggagctatgctccagtttgaagtaatcaaagccaagcactac
ggagtacccgcggacatcatcgaggggtatttgcatattaaaatgaatgctaaaattttc
ctaggcacattggcgataatgcgactttctggagaaggtccaactttcgacgccaacaca
gaatgttccatagcctaccaccacacaaggttccatgtcccaagcaacactcgcagattc
tttgctggagacgacagtgcccaagattgccccgccgtggaaaaatcatcattccaagct
atatccggcagaatgagcttaacatccaaacctgtcagctacgcacaaaaaccgggtaag
ttcgcagagttctgcgggtggtctatcacccctttaggagtaattaaagaccccttaaaa
ctctacgcctcactcgagctcgcgtgccgcactgacaacaaagaaaacgtagcgcaatca
tatgctctagatgccaaacatgcttaccaactaggtgatgcgctacatgacattctcacc
ccggagcaattcgtgatgcaccaaaagacaatccgcatgcttcacgaattgaaggtgggc
aatctcctaaaataa
DBGET
integrated database retrieval system
