Viruses: 5179340
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Entry
5179340 CDS
T40000
Symbol
YPBV_gp35
Name
(RefSeq) Yersinia phage Berlin; internal virion protein with endolysin domain
KO
K21508
Autographiviridae peptidoglycan hydrolase [EC:4.2.2.-]
Virus
369257
Yersinia phage Berlin
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
SLT
Motif
Other DBs
NCBI-GeneID:
5179340
NCBI-ProteinID:
YP_919018
RS:
NC_008694
UniProt:
A0ZXG4
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Position
NC_008694:27895..31842
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AA seq
1315 aa
AA seq
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MDKYNPNEPHEYDALFQQAADTHGVSYGLLRKVGWVESRFKPTAQSPTGPRGVMQFTKAT
GQAYGLQNDEDFTDPAKSIDAGARYLSDLVKKYNGDELKAALAYNQGEGRNGKPQLDAYD
SGNFASIGDEGRNYLRSLLDVAKSPKSGDLESFGGITPKAKGIPLEAAMSGIGKKGSVTT
ELPESHDMSFRGKEQAAPNQPFGKDYWEAKGTTLDEANKRSTFFGFGNATEAELSNSTLG
VAFRAGKHDDGFDVLTDVLQPTRFNSHIWTPEELEKIRTEVKNPAYMNVVLGGSAENLDE
LIKMANENYETDAKAADAGLGAKLSAGLIGAGIDPLTYVPIAGTTAKGFKLVNKALMVGA
QAGALNVASEGLRTSIAGGEAHYAEAALAGMLLAGGLTAVADGVAAGLRKSGAEQIENPF
AAAQMRFEARETARNTGGYDASRMPPSEDRVFSQHNGVEYAPLETEPGAVVLKDGSIISD
TNLANPMTAKEFAEVDPERAAWGLPMRGLSEIGLRTLRSEHAEIRGLAKDLVRSPTGMES
GSHGKFGATASDIKERLHSTNQRTYNDLYGAMKEAMADPEWSVGVFKSGAQGARQEIYRR
AAVAIERPELQANLTKAERKVMDIMKEHFDLKREMMENPSMFGNKANSIFPNSRHKGTYV
PHVYSREAKQLYSQALGGTDGLQEAIAASWMTSYRSRPEVKARVDEHLAETLGIDVKAVT
EEMVMKHASDKAYGIAKTDQFNSSSVLDDNIEGIAGIENNSFLEARNLFDSDMPVTLPNG
QQFSVNDLRDFDMKSVMPAYDRRVDGDIAIMGGTGKTTAELVAEISTLDKKFEGKGTVKG
EVGALKDTIKILTGRARRNQDTLGDTMVRALSDMSFFTKNAYMGLQNLTEISGMLAKGNI
RAMLHGVPALRDLAFRNKPVSGSELKELHSMVFGREFDQLIRPSRQDIIQRLRESTDTSD
VAAKVAGTIKHTTQELAARSPLTKFLNGTSNYLLDMARQGVMGDVVTHAVTGKGANKWIK
GDMLKSASISKEQWEGIQSLIRENVTRGEDGKFTFKDKRKLANDPRAMDLWRLADKVADE
TMLRPHKVSLQDSHAFGATAKLVLQFKSFVIKSMNSKFIRSGNEAFKNHRAMDMALTYAI
SGGIAGSYYVAQAHLKAAGLPKEQQKEYLKKSLDPKMIAYAAASRSSHLGAPLSIANFGM
GAAGYDQGLMVRSTILPKGEDKRESNKAVSSRDMGDSIMGAIGEQVPALGFAGATFAASR
NAYGVLTAPNKLTEREMMTGLMNAHRELIPNDPISQQMLIKFYEANGVHIKSNKK
NT seq
3948 nt
NT seq
+upstream
nt +downstream
nt
gtggataagtataacccgaacgaaccgcatgaatatgatgcgttatttcaacaagctgct
gacacacatggagtctcctatggccttcttcggaaggtcggttgggtagagtcccgcttt
aagcccacggctcaatcaccaacaggtccaagaggtgtcatgcagttcactaaggcaaca
ggtcaggcttatggtctccagaacgatgaagacttcactgaccctgctaagtcaattgat
gcaggtgctcgttacctttcagacctcgttaagaagtacaacggggatgaacttaaagct
gccttagcgtacaaccaaggtgaaggacgtaatggtaagcctcagttagatgcctacgat
tctggcaactttgcgagcattggggacgaaggccgtaactatctgcgttcactgctggat
gttgctaagtctcctaagagtggagaccttgagtcattcggcggtatcaccccaaaggct
aaagggattccgcttgaagctgctatgagcggtatagggaagaaaggaagtgtgacaact
gagctccctgagtctcacgacatgtcctttcgaggtaaagaacaggccgctcccaatcag
ccgttcggaaaagattattgggaagccaaaggtacaactcttgacgaagcaaacaagcgt
tcaaccttctttggattcggtaatgctactgaagcagaactctccaactcaaccttgggt
gttgccttccgtgctggtaagcatgacgatggtttcgatgttcttactgacgtacttcaa
ccgacacggtttaatagccacatttggacgcctgaagaactggagaagattaggactgaa
gtgaagaaccctgcgtacatgaacgttgtacttgggggttccgctgagaaccttgacgaa
ctaatcaagatggctaacgagaactatgagactgacgcaaaggctgcagacgcaggccta
ggtgccaagctgtccgctggtcttattggtgctggtattgaccctctgacctatgttcca
atcgctgggactaccgctaaggggttcaagttggtgaacaaagcgttaatggtaggtgct
caagctggtgcacttaatgttgcctctgagggcctacgtacttcgattgctggaggtgag
gcccactatgctgaagctgccttagctgggatgctacttgctggtggactgactgctgtg
gcagatggtgtagctgctggtctccgtaagtctggtgctgaacagattgagaacccgttt
gctgctgcacagatgcgctttgaggcccgtgagactgcacgcaacactggtggttatgac
gcaagccgtatgcctcctagtgaagaccgagtgttctcacagcacaatggcgttgagtat
gcaccactggaaaccgaaccgggtgctgtagtactgaaggatggttccattattagtgat
accaatctagcgaaccctatgacagccaaagagtttgccgaggtggaccctgaacgtgct
gcttggggattgccgatgcgtggcctgagtgaaataggtttgagaacactacgttccgaa
catgctgaaatccgtggtctcgccaaggacttagtgcgctcacctacaggtatggagtct
ggctcacacggtaagtttggggccactgcctccgatatcaaagagcgactgcacagtacc
aaccagagaacctacaatgacctctatggtgcaatgaaggaagcaatggctgaccctgag
tggtctgtgggtgtgttcaagagtggtgctcaaggtgctcgtcaagaaatctatcgtcgg
gcagctgtggctatcgagcgtcctgaacttcaggctaacttgaccaaggcagagcgtaag
gtgatggacatcatgaaggaacactttgacctcaagcgtgagatgatggagaacccgtcg
atgttcggcaacaaggccaactctatattccctaacagtcgccacaaagggacttacgtt
cctcatgtgtactcaagggaagccaagcagttgtactcacaggctctgggaggtaccgat
ggtctacaggaagcaattgctgcaagctggatgacatcctatcgttcacgacctgaagtg
aaagctcgtgttgatgaacacttagcggaaaccttgggtattgacgttaaggctgttact
gaagagatggtcatgaaacacgctagtgacaaggcatatggtatcgccaagactgatcag
ttcaactcttccagtgtccttgatgataacattgagggtattgctggtatcgagaacaac
tcattccttgaggcccgtaacctgttcgactctgacatgcctgtaactctccctaacgga
caacagttctccgtgaatgacttacgtgacttcgatatgaaaagcgtcatgccagcctat
gaccgccgtgttgatggtgatattgctatcatgggtggtacagggaagactactgctgaa
ctcgtagctgaaatcagtactctcgataagaagtttgaaggtaagggcacagtgaagggt
gaggtaggagcactgaaagataccattaagattctcactggccgtgctcggcgtaatcag
gatactttgggagacactatggttcgcgctctgtccgatatgtccttctttacgaagaac
gcatacatgggcttgcagaacctaactgaaatctctggtatgttggcaaagggtaacatc
cgtgcgatgctccatggtgtcccagcactacgtgacttagcgttccgcaacaagcctgtc
tctggtagtgaactcaaagaactccactcaatggtgttcggcagagagttcgaccagtta
attcgaccgtcccgtcaggacatcattcagcgtctccgagagtccaccgatacatcagat
gtagccgctaaggttgctggtactatcaagcatacgactcaagagttagctgcccgctca
cctctaaccaagttcctcaatggtacgtcaaactaccttctggatatggctcgacagggt
gtgatgggtgatgtggtaactcatgctgttacaggcaaaggtgccaacaagtggattaag
ggtgacatgctgaagtctgcgagtatctctaaggaacagtgggaaggcattcagtctctc
attagggagaacgtaactcgtggtgaagacggtaagttcaccttcaaggataagcgtaag
ctggctaatgatcctcgtgccatggacttatggcgtttagctgataaggttgctgacgaa
acgatgctccgacctcataaggtttccttacaggattcccatgcgtttggtgccaccgct
aagttagtcctgcagtttaagtcgtttgtcatcaagtcgatgaactctaagtttatccgc
tctggtaacgaagcctttaagaaccatcgcgctatggacatggcgttgacctatgctatc
tctggtggtattgctggctcctactatgtggcacaggctcacttgaaagctgctggccta
cctaaagagcaacagaaggagtacttgaagaaatccctcgaccctaagatgattgcctac
gctgcggcctccagaagttcacacttaggggctccgctgagtattgctaacttcggtatg
ggagctgctggttatgaccaaggtcttatggtccgctctacgattctacctaaaggtgag
gacaaacgtgagagcaataaggcagtatcttctcgtgacatgggtgattccattatgggc
gctattggtgaacaggtgcctgctctcggattcgctggtgcaacttttgctgctagtcgg
aatgcttatggtgtccttacagctccgaacaaactgaccgagcgtgagatgatgactggc
ttaatgaatgctcaccgagagttgatacctaacgacccaatctctcaacagatgctcatt
aagttctatgaggccaacggtgtgcatattaagtctaacaagaagtaa
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