Viruses: 5179523
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Entry
5179523 CDS
T40000
Symbol
SCFAV_gp02
Name
(RefSeq) Strawberry chlorotic fleck-associated virus; RdRp
Virus
399314
Strawberry chlorotic fleck-associated virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
RdRP_2
RdRP_3
Motif
Other DBs
NCBI-GeneID:
5179523
NCBI-ProteinID:
YP_762622
RS:
NC_008366
UniProt:
Q0GK54
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Position
NC_008366:<8590..9999
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AA seq
469 aa
AA seq
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SYVRSQAIPDRKASLQENLYSFESRNYNFLDCERFSSPKQFGIAMAMAVLKSCFNLEKFS
TLKDDLIAISEKNILKWLKKRDESSCKALMKDIEKPFDLETEISNFKLMVKKEAKVKLDD
SCLSKHPPAQNIMFHRKAVNAIFSPVFDEFKNRVLYCLNSNIVFFTEMTNDHFSQILRRL
LGDQDVYNVGEIDFSKFDKSQDIFVKEYERTLYEAFGIDSELLNVWMQGEYSAKATTLDG
SLSFSVDNQRRSGGSNTWIGNSLVTLGIIALYYDVSKFRLLAISGDDSLIYSDNKIANFA
TEICLESGFETKFMSPSVPYFCSKFVVQTGTNTVFVPDPYKLMVKLGASNKFVTNEGLFE
VYTSFRDLTKDYGNQIVLERLKHLVEKKYNFESGTTLPALQALHCLRSNFMSFARLFPRI
SGWWMVDPRNLKFFVKLPGIIIERVNEERDSRYFVSLLDSAEATVVSQD
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
agctatgtgagatctcaagctataccagatcgcaaggcctctttacaagagaatctttat
tcttttgaaagtagaaattataattttctcgattgtgaaaggttcagtagccctaaacaa
tttggaatagctatggccatggcggttttaaagtcatgctttaacctggagaagttttct
actcttaaggatgacttgatagccataagtgagaagaatattcttaaatggcttaagaag
cgagatgagtcgagttgtaaggctctgatgaaggatattgaaaagcctttcgacttggag
actgagatatcgaattttaaactaatggttaaaaaagaggcaaaggtgaaacttgatgat
tcctgcttatcaaagcatcctcctgcgcagaatattatgtttcataggaaggcggtgaac
gcgattttttcgccagtttttgatgaattcaagaatcgtgttctttattgcttaaactcg
aatatagtcttctttactgagatgacgaatgatcatttttcacagattcttcgtaggctt
cttggcgaccaagacgtctacaacgtcggggaaatagacttcagcaagttcgataaatct
caagatatttttgttaaagaatacgaaagaactttgtatgaagctttcggcattgactct
gagcttttaaatgtgtggatgcaaggcgagtattctgcgaaagccaccaccttagatggt
tccttaagtttttctgttgataatcaaaggcggtcgggtggttcaaatacttggattggt
aattcgctggtcacgcttggtataatagcattatactatgatgtgagtaagttcaggctt
ttagctatttcaggtgatgactctttaatatattcggataataaaatagcgaattttgcc
actgaaatttgtttggagtcgggttttgaaacaaaatttatgtctccaagcgttccttat
ttttgttctaagtttgttgttcaaactggaacaaacacggtttttgtaccagatccctat
aaactcatggtgaaacttggtgcttcgaacaagtttgttactaatgaaggtctttttgag
gtctacacttcttttagggatcttaccaaagattatggtaatcaaattgtgttagagaga
ttgaaacatcttgtggaaaagaagtacaactttgagtcgggtaccactttaccagcttta
caggctctacattgtttgcgatcgaattttatgtctttcgcacgtttgtttccgcgcatt
tcgggttggtggatggtcgatccgcgcaacttaaaattctttgtgaaactaccgggaatt
ataatagagcgtgtaaacgaagaaagagattctaggtatttcgtgtcactactcgacagc
gcggaggcgaccgtcgtaagtcaagattga
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