Viruses: 5219900
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Entry
5219900 CDS
T40000
Symbol
s1gp1, CVV_sRNA1gp1
Name
(RefSeq) Citrus variegation virus; putative viral replicase
KO
K26863
Ilarvirus methyltransferase/helicase
Virus
37127
Citrus variegation virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Vmethyltransf
Viral_helicase1
AAA_30
Motif
Other DBs
NCBI-GeneID:
5219900
NCBI-ProteinID:
YP_001285482
RS:
NC_009537
UniProt:
A5JVP4
LinkDB
All DBs
Position
NC_009537:73..3303
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AA seq
1076 aa
AA seq
DB search
MDTIVQHESSVLRVDDLINDTIRRNAARPETAVGRLVSDAAVQVVARQCDLTPAKPLNVS
FQLSPEDQNALRRDFPGRELQFRNSSYSSHSFAAAHRVCETDYIYGRFQTERTTIIDIGG
NFCTHSKMGRDNVHSCCPILDVRDGARYTDRFMSVAGSLEKQPERELRLNYCSNRFEDCD
VSAPWAMAIHSISDIPITTVVKHCFRRGVKKLIASIMMDPMMLVATKGFMPRLNVQWEVE
TDEKEKSRRISFHFVDAPGLSYSHNYDVLMQYMTCNQVIINGKAAYRVERVADLSGVFIV
EITLAATAGIERLDLVPMRDVSCAWMTSLRRKTLVRVAIPQYRHSWEIKYVIADTDFVRR
VAEVSFRQYKPDTPLEDLVKSVATMISSASNHCIINGVTMQTGTPLAIEDYVPMAVTFVA
FAMSRYKSIKEGVKMVKQRGTNICDPNDHYDYEKDGSDVKNFSTHVIPMKNTIKSLFFPM
KAKINDNSMLIYSQSLMTTVVDEIKTLLGWDVWDTDDAVIQSLPSFYKMEDVFQVTSDHY
CLSHVLSVDWWLEGLYDDYDVLRRAHKKKLEEEESHKTKIENALLKIAEVLEKPDVDDGL
KQLKTLPIINSLLEKKVEEIVTKPQCRDSEKPHINPYADAIKEAIAYYHELEVVNTRNLR
GVGDYLFWRTKSSYASVWGADESRVVLEPMARKFYSRDKNVPIPEYERGMTSDGFISLVW
KDGEITRETWSSLSKYAVVLFDQSCVFDAGSRLLPGLNKALVMDANFKVVIEDGVAGCGK
TTSLLKQAKPDSDLLLAANRETAKDAKNSGIIPDALLYRVRTVDSYLMLKNWFTAGRLLV
DECFLVHAGLIYAAAALARVKEVIAFGDTKQIPFVSRIPAVTLRHASVIGTLKPRTVTYR
CPRDVTAVLSEKFYNTKVKTFNPVKTSLDLISINSGMEIPVVKDALYISHTKADKFALKR
LPGMSNVDVLTTHEAQGKTRDNVILVRLSRTTHLLYSGKMPEAGSSHNLVGLSRHKKSLK
YYSIFADDPDDQIASGIRWSKSLDEQELSQYRAAESVSSMKPSEGSSGMCSAPGLS
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atggacacaatcgttcagcatgaatcaagtgttcttcgtgtcgatgatcttatcaacgac
acgatacggagaaatgctgcacgccccgagacggccgttggaaggcttgtctcggatgcc
gctgttcaagtagtcgccagacaatgcgacttgactccagcgaagcccctcaacgtttca
tttcagttgtcacccgaagatcagaatgcgttgagaagagattttcctgggagagaactc
cagttcagaaattcatcatattcgtctcattcttttgcggctgcgcaccgcgtgtgtgag
acggattacatttatggacgtttccagacggaacgtaccaccatcatcgatataggagga
aatttttgcacccatagtaagatgggtagggataatgtccattcatgttgccctattctc
gatgttcgtgatggtgctaggtataccgacagattcatgtctgttgctggatctttggag
aagcaaccagagagagaattgcgcttgaattattgctccaatagattcgaagattgtgac
gtttccgcaccttgggcgatggcgatacactctatttctgacatacctatcactaccgta
gtgaaacattgttttagaagaggagtaaaaaaactcattgcttccataatgatggatcct
atgatgcttgtcgctactaaaggtttcatgccccgtttgaacgttcaatgggaagttgag
accgatgagaaagaaaaatcccgacgaatttcttttcatttcgtcgatgctcccgggttg
tcatattctcataattatgacgtattaatgcaatacatgacttgcaatcaagtcataatc
aatgggaaggccgcgtacagagttgaacgcgttgcagatctatctggtgtttttattgtt
gaaatcaccttggcagcaactgctgggattgaaagattggatctagtgcccatgcgcgat
gtttcatgtgcatggatgacgtcgttaagacgaaagaccctagtgagggtggccatacct
caatataggcattcatgggaaattaaatatgtgattgctgacacggatttcgtcagaaga
gtggctgaggtttcattccgtcaatacaagcctgacacaccattggaagatttagtgaag
tctgttgcgacgatgatttcctctgcttctaaccattgcatcattaatggtgtgaccatg
caaactggtactcctttggccattgaagattatgttccaatggctgttacctttgttgct
tttgccatgtctagatacaaatcaataaaggaaggagtgaaaatggttaagcagagaggt
actaacatttgtgatcctaatgatcattacgattatgaaaaagatggatccgatgttaaa
aatttttccacccatgttattcccatgaaaaataccatcaagtcccttttttttcccatg
aaggcaaaaatcaatgataattccatgctgatttatagtcaaagtctcatgacgactgtc
gtcgatgagataaaaactcttcttggatgggatgtttgggacactgatgatgcagtcata
caatctctaccttccttttacaaaatggaagatgttttccaagttacctccgaccactat
tgtttatcacatgtattatctgttgattggtggttggagggattgtatgatgactatgac
gttttacgaagagcacacaagaaaaaacttgaagaggaagaatctcacaaaactaaaatt
gagaatgccttattgaaaattgctgaggttttggagaagcctgatgtcgatgacgggcta
aaacagttaaaaacattgcccatcattaattctcttttggagaagaaggtggaagaaatt
gttactaaacctcaatgcagggattctgaaaaaccccacattaatccctatgctgatgcg
atcaaggaagcaattgcttattaccacgagcttgaggtggtaaatacgcgcaatttacga
ggagttggagattacctcttttggcgcacgaagtcgagctatgccagcgtgtggggtgct
gatgagtctagagtggttcttgaacctatggctaggaagttctactctcgagacaaaaac
gttcccatccccgaatatgagcggggtatgacgagtgatggtttcatttcccttgtttgg
aaggatggtgagatcaccagggagacgtggagttctctttccaaatacgccgttgttttg
ttcgaccaatcgtgtgtatttgacgccggctcacgacttttaccagggttgaataaggcc
ctagttatggatgccaattttaaggtcgtgatcgaagatggtgtggctggatgtgggaaa
acaacatctctactcaagcaagcaaaacctgattcggatttgttgttagcggccaaccgt
gagaccgcaaaggatgcaaaaaacagtggaattattccagatgctcttttatatcgagtt
aggactgttgattcctacttgatgttgaagaattggttcactgctggtcgattactagta
gatgaatgtttcctggtccatgctgggttgatctatgcggctgccgccttggcacgagtg
aaggaagtcattgcttttggtgataccaagcaaattccattcgtgtctcgtattccagcg
gttaccttacgtcacgcttcggtaatcggtacgttgaagcctaggactgtgacttataga
tgtcctagagatgttaccgctgttttaagtgagaaattttataatactaaagttaaaact
ttcaatccggtgaaaacttcattggatttgatcagcataaattctggtatggagattccc
gtggtgaaggatgctttatacatttcccatactaaggctgataagtttgctttaaagaga
ttaccaggtatgagcaacgttgacgtgctcactactcatgaagcacaagggaaaacgcgt
gacaatgttatccttgttagactaagcagaactactcatttgttgtactctgggaaaatg
ccggaagccggtagttctcataatttagttggtctgtcccggcataaaaagagtttgaaa
tattactccatttttgctgatgatcctgatgatcaaattgcatctggaattcgttggtct
aaaagtttagacgaacaagagctgtcccaatatagggcagctgagagtgtttcttctatg
aaacctagtgaagggtcctctgggatgtgctcagcacctggcctaagctaa
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