Viruses: 54985649
Help
Entry
54985649 CDS
T40000
Symbol
HOS40_gp085
Name
(RefSeq) Pectobacterium phage DU_PP_V; replication origin binding
Virus
2041492
Pectobacterium phage DU_PP_V
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Herpes_ori_bp
Motif
Other DBs
NCBI-GeneID:
54985649
NCBI-ProteinID:
YP_009795291
RS:
NC_047887
LinkDB
All DBs
Position
NC_047887:59700..62516
Genome browser
AA seq
938 aa
AA seq
DB search
MFSILEGHDSFSRDPSTGLWKSTKTAEYSFAKEFSLEHPNGRPSALPFKFNVVDEVYPET
LGDAYRLLKRLTTNPHVVAVRGKCVVPKKALRRRKPNFDVSVPSRIIAMDVDGITLKEDI
PFWDINRLAKHVIKMLNSISEDMFPLNAGFVAHASSSAGLKPGIRMHLMLESNIPVTQGQ
LKFLFTTINDSSKLKYGGEIADLAYYSSVQAHYFADPIFKDGIVDPFIAENKSRLVFVRG
ATVNLPTNLPDFETTRGEFKEEFLSLLDQVTGITGATEKVEATISELEEADDGVYLRIIP
KLYHRALEDGVDFAWLEREITPALSEYIATKDNSRTIVDYFNNGRRQALKAFVNNAKREI
PESNLKGIPLKKLSADIEPHNNYLKMTKVPPEGTLTFVKASLGTGKTTAVVKWLEAGVLP
GKFLAITNTRALVSSNAKKFMAGQYNQSVDMLNFKRGAEQRMSSTIHSIHKFKSFVGEID
TIFIDECDAVMNDLLFSPVVKQRRECISVLRDILISAKRVILSDGDISGETIEAYGSLID
FDKPINYYVHHRKMLTGVHAYEFPDENSIWVALQTSLELGEKCILVSDCGPDELNEKGMS
LRNSTDCIVKEIHSNSTSDVDIRRILDYTSEELVAQQIDALLCSPSVTSGVDFNYFDSVF
VITRTSNQAPNMRFQAIRRDRGAKNIYYFIDKSTSGFSAGSDQYNIDEGWFEFSQQLYAK
RRELESKNYISTLRYYLLDQGASINIFSESWGNIDSASAEYTEERVKAIFHSTPEYSMPR
HADAYEAKLLLMQYYHLEKLSDITEELVLQFITEKPDQRAAFLHKLQDIFWPSILKCNNV
TLYPFIEALRNHKKDFFIRTGQSANPKYARMYLGMMGIKSDFNFDQVIDWYRTYCKIEGI
PVPVQFMTKEEVAMHEETRAELGARNGSEMESAEEKES
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgttctctatattggaaggacatgatagtttctccagagacccctcaacaggtttatgg
aaaagtactaagacggctgagtactcctttgctaaggagtttagtctagagcaccctaat
ggtaggccttcggctctaccatttaaatttaatgtagttgacgaagtatacccagaaact
ttgggtgatgcatatcgtcttctgaaaaggctcactacgaacccccatgttgtcgctgtt
aggggtaaatgtgttgtgcctaagaaagccctccgtagacgtaaacctaactttgatgta
tctgttcctagtagaattatagctatggacgttgacggcattaccttaaaagaggatatt
ccgttttgggacattaataggttagctaaacacgttatcaagatgcttaatagtattagt
gaggatatgttcccacttaatgcagggtttgtagctcatgcatcgtcttctgctggtctt
aagccaggtattcgtatgcacttgatgctagaaagtaatatacctgtaactcaagggcag
ctaaaatttttatttactactattaatgactctagtaaattaaagtatggtggtgaaatc
gccgacctagcctattactcttctgtgcaggcacactattttgcagacccaatctttaaa
gatggtattgtcgatccgtttatagcggagaataaatcacgtctagtatttgttaggggt
gcaacggtcaacttacctactaatctgcctgactttgaaactactcgtggagagtttaag
gaagagtttctttccctgttagaccaagtaacaggtattacgggtgctactgagaaagta
gaagcaactatttctgagttagaggaagctgacgatggtgtatatctacgtattatacct
aagctttaccacagagctttggaagacggggtagactttgcttggctagaacgtgagata
actccggctctaagtgaatatattgctaccaaggataactccagaactattgttgattac
ttcaataatggtcgtagacaggcgctcaaagcatttgttaataatgctaaacgcgagatt
cctgaaagtaacttgaaaggtattccacttaagaagttatctgcggacatagaaccgcat
aacaactacttgaaaatgacaaaagtaccaccggaaggcacacttacttttgtaaaggct
agtcttggtacaggtaagacaacagctgtggttaaatggttagaggctggagtacttccc
ggaaagttcctagctatcacaaatactagggcattggtatcttcaaacgctaaaaagttt
atggcagggcagtataaccagtcagtggacatgctcaactttaagaggggggcggaacaa
cgaatgtcctccactattcactctatacataaatttaaatcatttgttggtgagatagat
actatatttatagatgaatgtgacgccgttatgaatgacttattattctcccccgttgta
aaacagcggagagagtgtatctcagtgctgagagatattttaattagcgcaaaacgtgtt
attctgtctgatggggatatcagcggggagactatcgaagcatatggtagtttgatagac
tttgataaacctattaactattatgtgcatcaccgtaagatgttaacaggagtacacgcc
tacgagtttccagacgaaaatagtatctgggtagcgttacaaactagtctagagctaggg
gagaagtgcattctagtatcagactgtggccctgacgagctaaatgaaaagggtatgtcc
ctgcgtaacagtactgattgtatagttaaagaaattcactctaattcaacctccgatgtg
gatattagacgtatactggactacactagtgaagaactagttgcacaacaaattgatgcc
ttactatgtagcccttcggtaactagcggagttgactttaactactttgatagtgtattt
gttataacaagaacatccaatcaggcgccaaacatgcgctttcaggcaattaggcgcgac
cgtggagctaaaaatatctattacttcatagataagtctactagtggtttctccgcagga
tctgatcagtataatatagatgagggctggtttgagttttcccagcagctttacgcgaag
cgtagggagctggagtctaagaattacattagtactcttagatactatctattagatcaa
ggagcatctataaacatcttcagtgaaagttggggcaatattgatagtgcatcagcagag
tacacagaagaacgtgttaaagcaatattccatagcaccccggaatactctatgcctagg
catgcagatgcatatgaagctaaattgctactgatgcagtattaccatctagagaaatta
tcagacataactgaagaacttgtgctacagtttataaccgaaaaaccagaccaaagggca
gcgtttctgcataagttgcaggatatattctggccttccatactaaagtgtaacaacgtt
actttgtatcctttcatagaggcactgcgtaaccataagaaagacttttttattaggact
ggacagagtgctaatcctaagtatgctagaatgtacttgggtatgatgggaattaaatca
gactttaactttgatcaggtaatagactggtatagaacctattgcaagatagaaggaata
cctgttccagtccaatttatgaccaaggaagaggtagctatgcatgaggagaccagagca
gaattaggggctagaaatggatcagagatggaaagtgccgaagaaaaagaaagctaa
DBGET
integrated database retrieval system
