Viruses: 54985674
Help
Entry
54985674 CDS
T40000
Symbol
HOS40_gp060
Name
(RefSeq) Pectobacterium phage DU_PP_V; straight fibre tail protein
Virus
2041492
Pectobacterium phage DU_PP_V
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
PB4_spike
Fn3-III_PB4
Fn3-I_PB4
Fn3-II_PB4
Phage_Tail_Tip
Motif
Other DBs
NCBI-GeneID:
54985674
NCBI-ProteinID:
YP_009795316
RS:
NC_047887
LinkDB
All DBs
Position
NC_047887:complement(84054..86276)
Genome browser
AA seq
740 aa
AA seq
DB search
MIVNNATEKLIIQSLVASYTKVYILHSIYRDYDVVGRSFWTSGPGGVSERRDITDTSINF
VTLSSFVPNAAYTIRGAFFDAMVDSELLGAQIGINLSDPTTFTTKVYPTITSANSIAESV
DVGVGPPRVTIGTSGDADYCVIEFKLVGSTQWVRYYTGPISPSISFSGVPIGQYNVRISG
FITLPDGTTTESSIPYEFPGVLDVKYNFVPPTAPKNMRFRVARIQDGKERYDLRVEWDWE
KETGANVREFSLHYIESSEYAATGWSKAQVINVGAARAATITSFPLSRTYRFKVSSIAWG
PDTQAVTESDPVEFILTPDTPLDSSFTNETGIEVNYAHIKGTFLDSGVRKQSFLIDAATG
SVSLGALDGQGRAPISFDPVSKIVNVDGSVITKSIYSASFILTNLTGEDNPAIYSQGKSW
GDANSGIWMGIDNTTLKPKFDLGNSTQYIRYDGDTLRISGQVVLGTPNGDIPLGEGIQGK
QTVFIYIAASTTPATPTNSGYPPPGWATTPPARDVATQNIYVSTGTLDPITNTLVSGTSW
STPVQWSGSEGSSEEGGRGAGIYTQPVPGTVGFNVATANAFFNSNFGSGPVLGDVLTQYR
PETPSIAYTRYWNGTAWGTPDLVVHGDMIVNGTIPNAKILDATITGAKIADATITNAKIA
NATIESAKIKDAAITRAKIAETINSDNYVPNTTGTSLNFATGVIEMNGGTAGAGRMNIKN
DRIIVYDDNNQVAVVIGRRL
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgatagttaacaatgcaacagaaaaattaattatacagtctttggttgcatcgtatact
aaagtctatatattacatagtatctacagagactatgacgttgtaggtagatccttctgg
acttctggtccaggaggggtatctgaacgtagagacattactgacactagtataaacttt
gtaacattatctagttttgtccctaacgcagcctatactataaggggtgcgtttttcgat
gctatggttgattcagagctactaggggcgcagataggtattaacttatcagatcctact
acatttaccactaaagtataccctactataacatctgcaaattctattgcagaatctgta
gacgtaggtgtaggaccgcctagggttactataggtacttctggggatgctgactactgc
gttatagagttcaagttagtaggtagcacacaatgggtaagatactacactggtcctata
agtcctagtatttcctttagtggagtacctattggtcagtataacgtgcgcatatctggt
tttataaccttacctgatggcactactacagaaagttcaataccttatgaatttccgggc
gtactagatgttaagtataactttgtaccccctacagcccctaaaaacatgcggtttaga
gtagctaggattcaagatggtaaggaacgttatgaccttagagtagagtgggattgggag
aaggagacaggtgctaatgttagagaattctctctccactatatagagtcttcagaatac
gcagctacagggtggtctaaggctcaagttataaatgtgggtgcagccagagcggcaact
ataacatcctttcctttaagcagaacgtataggtttaaagtatcctctatagcgtggggt
ccagatacccaagcagttacagagtctgatccagtagagtttatacttactccagatact
ccactagactctagctttactaatgaaacaggaatagaggtcaactacgcgcatattaaa
ggtacgtttctagacagtggggttagaaaacaatccttcttaatagatgctgccacaggt
agtgtaagtttaggtgctttagatggccaaggcagggcaccaatatccttcgatcctgtt
agcaagatagttaacgttgatggatcagttataactaaaagtatatactctgctagtttt
atattgactaacttaacgggtgaagacaatcccgcaatatacagtcaaggtaaatcttgg
ggagatgctaattccggtatttggatgggtatagataacactaccttaaaaccaaaattt
gacttaggtaactctacccagtacattagatatgatggggatacccttagaatatccggg
caggtagttttaggaactcctaacggggatatacctttaggtgagggtatacaaggtaag
cagacagtatttatatatattgctgcatctacaactcccgcaacacctactaactctgga
tacccacctcctggatgggcaacaactcctcctgccagagacgtagccacacaaaacata
tacgtttctacaggcacgttagacccaattactaatactctagtgtcgggtacctcttgg
tctacaccagttcagtggtccggttcagagggttcctcagaagaaggcggaagaggagca
ggtatatatactcaaccagttccaggtacagtagggtttaatgttgccactgctaatgct
ttctttaatagcaactttggtagtggcccagtcttgggagatgttttgactcagtacaga
cctgaaacccctagcatagcatatactagatactggaatggaacagcatggggtactccg
gatttagtagttcacggggatatgatagttaacggtaccattcctaatgctaagatctta
gatgctactataactggtgctaaaattgctgatgccactattactaatgccaagatagct
aatgcgactatagagtctgccaagattaaagatgctgcaattactagagctaaaattgca
gaaactataaattcggataactatgtacctaatactacgggcacgtcattaaactttgca
acaggggttatagaaatgaacgggggtaccgctggggcagggagaatgaacattaaaaat
gacagaattatagtatacgacgataataatcaagttgctgtagttataggaagacgttta
tga
DBGET
integrated database retrieval system
