Viruses: 55013286
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Entry
55013286 CDS
T40000
Symbol
HOV37_gp06
Name
(RefSeq) Shigella phage VB_Ship_A7; internal virion protein with endolysin domain
KO
K21508
Autographiviridae peptidoglycan hydrolase [EC:4.2.2.-]
Virus
2562138
Shigella phage VB_Ship_A7
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
SLT
Acetyltransf_1
Acetyltransf_CG
Acetyltransf_10
Acetyltransf_7
eIF3_N
Motif
Other DBs
NCBI-GeneID:
55013286
NCBI-ProteinID:
YP_009821799
RS:
NC_048180
UniProt:
A0A4D6DS01
LinkDB
All DBs
Position
NC_048180:complement(5612..10546)
Genome browser
AA seq
1644 aa
AA seq
DB search
MDKYNPNEPHEYDALFQQAADTHGVSYGLLRKVGWVESRFKPTAQSPTGPRGVMQFTKAT
GQAYGLQSDEDFNDPAKSIDAGARYLADLVKKYNGDELKAALAYNQGEGRNGKPQLEAYD
SGNFAGIGDEGRNYLRSLLDVAKSPKSGDIESFGGITPKGKGISFDAAMSGIGEKGKVTT
ELPESHSMSFQGKEQTAPNQPFGKDYWEAKGTTLDEANERSTFFGFGSAAEAELSNSTLG
VAFRASKRDNGFDVLTDVLQPTRFNSHIWSPEELDKIRKEVKNPAYINVVLGGSAENLDE
LIKLANENYEADAKAAEAGLGAKLSAGLIGAGVDPLTYIPLAGTTAKGFKLVNKALMVGA
QAGALNVASEGLRTSVAGGDAHYAEAALAGMLLAGGLTAVADGVAAGLRKSGTEQIENPF
SATQMRFEARETARNTGGYDASRMPPSEDRVFSQHNGVEYAPLETEPGAVVLRDGSIISD
TNLANPMTAREFAEVDPERAAWGLPMRGLSEIGLKTLRSEHSEIRGLAKDLVRSPTGMES
GSHGKFGSTTSDIIERLRSLNHRTYNNLYSAMKEAMADPEWSVGMFKSGAQGARQTIYRR
ISEAIERPELQANLTKEERKVMDIVKEHYDLKREMMENPSMFGNKATSIFPNSRHKGTYV
PHVYSREAKQVYSQALGGTDGLQEAVAASLMASYHARPEVKARIDEYLKQVNSDVFSKAE
ADAKLAADTENFLRSQESVDTASYRMKLDDAATRASDKVAELKDVLTNAEKRVADRERKL
QNSKDRLASHEAKLKELEEKLAAKPNSKTIPVKIESRKKMIETQKSHVRINTERLDHMKG
QAAKVQDRITKATAEAEEAASTAKGAQAEAENFLRGAEAAPVMPDSLVTGGNSTSITKVS
NGELQGDYFAGKRDYSGETPYKVDGDFVYYTAKTTDGAEFAVDVFTKKGDHIGSVEFAKR
EGDVWHNPSLEVSEKYRRKGIATEMYRIAETESPDYVYRGTDESVGGVRTPDGQAFRKAY
DSTPAKPSERQKFGTDEKVEPKVDEEAMLSQMAEKYAMDKAYGIAKTDEFNSSSVIDDNI
EGLVGIENNSFLEARNLFDSDVPITLPNGQQFSVNDLRDFDMKHVMPAYDRRVDGDIAIM
GGTGKTTAELKDAIMALDKKSEGKGTMKGEVEALKDFVKIVTGRARRNQDTVGDTMVRSL
SDMSFFTKNAYMGLQNLTEIAGLLSKGNTRAMLHGIPALRDLAFRNKPVSGSELKELHSM
VFGKEFDQLIRPTRQDIIQRLRESTDTPDAVAKVVGTVKHTTQELAARSPFTKFLNGTSN
YILDMARQGVMGDVVTHAITGKGANKWIKGDMLKSASISKEQWEGIQNLIRENVTQGADG
KYTFKDKRKLANDPRAMDLWRLADKVADETMLRPNKVSLQDSHAFGAAAKLVLQFKSFVI
KSMNSKFIRSGHEAFKNHRAMDMALTYAISGGIAGSYYVAQAHLKAAGLPKEQQKDYLKK
ALDPKMIAYAAASRSSHLGSPLSIANFAMGAAGYDQGLMVRSTILPKGEDKKERNKAVTS
RDMGDSIMGAIGEQVPALGFAGATLAAGRNAYGVLTAPNKVTEREMMTGLMNAHREMIPN
DPISQQMLIKFYEANGVHLKSDKK
NT seq
4935 nt
NT seq
+upstream
nt +downstream
nt
gtggataagtataacccgaacgaaccgcatgaatatgatgcgttatttcaacaagctgct
gacacacatggagtctcctacggccttcttcggaaggtcggttgggtagagtcccgattc
aaacctacggcccaatcaccaacagggccacggggtgtcatgcagttcactaaggcaact
ggtcaggcttacggcctacagtctgatgaggacttcaacgacccggctaagtctatcgat
gctggtgctcgttaccttgcagacctcgttaagaagtacaatggggatgaactgaaagct
gcccttgcgtacaaccaaggcgaaggccgaaacggtaagcctcaattggaagcctacgac
tccggtaactttgctggtattggtgacgaagggcgtaactatttgcgctcacttctggat
gtcgctaagtctccgaagagtggcgacattgagtccttcggtggtatcaccccaaagggt
aaagggatttcgttcgacgctgctatgagtggtatcggggagaaaggaaaggtaactaca
gaactccctgagtctcactcaatgtcctttcaaggtaaagaacagaccgctcccaatcag
ccattcggtaaagactattgggaagcaaaaggaacaactcttgacgaagccaatgagcgt
tcaaccttcttcggattcggtagtgctgctgaagcagaactctccaactcaaccttgggt
gttgccttccgtgctagtaagcgtgacaatggttttgatgtgctcactgatgtacttcaa
ccgacacggtttaatagccacatttggtcgcctgaagaactcgacaagattcgcaaagaa
gtgaaaaaccctgcgtacattaacgttgtgcttggtggttccgctgagaaccttgatgag
ctaatcaagctggctaacgagaactacgaggctgacgctaaggctgctgaagctggactt
ggtgccaagctgtctgctggcctgattggtgctggtgtggacccgttgacctacatccca
ctcgcagggactacagccaagggattcaagctggtgaacaaggcgttgatggtgggtgct
caagctggtgcacttaacgttgcctctgagggtctgcgtacatccgttgctggtggcgat
gctcactatgcggaagctgctcttgctggtatgctgcttgctggtggactcactgcggtt
gctgatggtgttgctgcaggtctccgtaagtctggtactgaacagattgagaacccgttt
tctgctacacagatgcgcttcgaggctcgtgagactgcccgtaacactggtggatatgat
gcaagtcgtatgcctcctagtgaagaccgagtgttctcacagcacaacggcgttgagtat
gcacctctcgaaactgaaccgggtgcggtagtgctgcgtgatggttccattattagtgat
accaacttggctaacccaatgactgccagagagttcgctgaagtggaccctgaacgtgct
gcttggggattgcctatgcgtggactaagtgaaatcggcttgaaaaccctacgttcagaa
cactctgaaatccgtggtctcgcaaaggacttagtgcgctcacctacaggtatggagtca
ggctcacatggtaagtttggttctactacatcggacatcatagagcgactgcgtagtctc
aaccatcgaacctacaataacctctatagtgcaatgaaggaagcaatggctgaccctgag
tggtctgtgggtatgttcaagagtggtgctcaaggtgcccgtcaaacaatctatcgtcgt
atcagtgaggctatcgagagacctgaacttcaagctaacttgaccaaggaagagcgtaag
gttatggacatcgtgaaggaacattatgacctcaagcgtgagatgatggagaacccgtcg
atgttcggtaacaaggcaacctctatcttccctaacagtcgtcacaaagggacttacgtt
cctcatgtgtactcgcgggaagccaagcaggtgtactcacaggctcttgggggcactgat
ggtttacaggaagcagttgctgcaagcctgatggcatcatatcatgcgcgtcctgaagtc
aaggcccgtattgatgaataccttaaacaggttaacagtgacgttttctccaaagctgaa
gctgatgccaaacttgcggctgacactgagaacttcctcagaagccaagagtctgtagac
acagccagttaccggatgaaactggacgatgcagctacacgggcaagtgataaggtagcg
gaactaaaagacgttctgaccaacgctgagaagcgagttgcggaccgtgaaaggaaactc
cagaactccaaggacagactggcttcgcatgaggctaagttgaaggagttggaagaaaaa
ctagctgctaaacctaatagcaaaaccattcctgttaagattgagagccggaagaagatg
attgagacccagaagtctcacgtccgtattaacacagagcgtctcgaccacatgaaagga
caggctgctaaggtccaagatagaatcaccaaagccaccgccgaagctgaagaagccgcc
tctactgccaaaggtgcacaagctgaagctgagaacttcctgagaggtgctgaggctgct
ccggtaatgcctgactcactggtgactggtggtaactcaactagcatcactaaggtctct
aatggcgaactccaaggtgattacttcgctggtaagcgagactactctggtgagactcct
tacaaggtggatggtgattttgtctactacacagctaagacaactgatggtgctgagttc
gcggtggatgtgttcaccaaaaagggagaccacattggcagcgtagagttcgctaaacgt
gagggagacgtgtggcataatccaagtcttgaggtgtccgagaagtaccgccgcaaaggc
atcgctaccgagatgtaccgaatcgctgagactgagagtcctgactacgtgtaccgtgga
acagacgaatcagttggtggcgtgcgtacccccgatggtcaagcattccgtaaagcctac
gactccaccccggctaaaccttcagagcgccagaagtttggcacagacgagaaggtggaa
ccaaaggtagacgaagaggctatgcttagtcagatggctgagaagtacgctatggacaag
gcttatggtattgcgaagaccgatgagttcaactcttcaagtgtcattgacgataacatt
gagggtctcgttgggattgagaacaactcattccttgaagcccgtaacctgtttgattct
gacgtgccaatcactctaccgaatggtcaacagttctctgtgaatgaccttcgtgacttc
gatatgaagcatgtgatgccagcatatgaccgccgtgttgatggtgatattgctatcatg
ggaggcacaggcaagactactgctgaactcaaggacgctattatggctcttgataagaag
tctgaaggtaaaggcacaatgaaaggtgaagtggaagcacttaaggatttcgttaagatt
gtcactggtcgtgctcgacgcaatcaggataccgtaggtgacactatggttcgctctcta
tccgatatgtccttctttacgaagaacgcatatatgggcttgcagaacctaactgaaatc
gctggtctattgtcgaagggtaacacccgtgcgatgctgcatggcattcccgctctgcgt
gacctagcgttccgtaacaagccagtctctggtagtgaactcaaagaactccactctatg
gtgtttggtaaagagttcgaccagttaatccgaccgactcgtcaagacatcattcagcga
ctccgtgagtctactgatacacctgatgctgtcgctaaggttgttggtacggttaagcac
accactcaagagttggctgctcgctctccgttcactaagttcctcaacggtacttccaac
tacattctggatatggcccgtcagggtgtcatgggagatgtggtaactcatgccattact
ggtaagggtgccaacaagtggattaaaggcgacatgctgaaatctgcgagtatctcaaag
gaacagtgggaaggcattcagaacctcatccgtgagaacgtcactcaaggtgctgacggc
aagtacaccttcaaggacaagcgtaagctggctaatgacccgcgagctatggacctgtgg
cgactggctgataaggttgctgatgagacaatgctgagacctaacaaggtttcacttcag
gattcccatgcgtttggtgctgccgctaagttggtccttcagttcaagtctttcgtaatc
aagtcgatgaactctaagtttatccgctccggtcacgaagcctttaagaaccatcgtgct
atggatatggcgctgacctatgcaatctctggtggtatcgctggctcctactatgtggca
caggcccacttgaaggctgctggtcttcctaaagagcaacagaaggactacctgaagaaa
gctctggaccctaagatgattgcctacgctgcggcttcccgaagttcacaccttgggtcg
cctctgagtatcgcaaacttcgctatgggtgctgctggttacgaccaaggtctcatggtc
cgctctacgattctccctaaaggagaggataagaaagaacggaacaaggcggtaacttct
cgtgacatgggtgattccattatgggcgctattggtgaacaggttcctgctcttgggttc
gctggtgctacccttgctgctggtcgaaatgcttatggtgtccttacggctccaaacaaa
gtgaccgagcgtgagatgatgactggcttaatgaacgcccaccgagagatgattcctaac
gacccaatctcccaacagatgctcatcaagttctatgaggccaatggtgttcacctcaag
tctgacaagaagtaa
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integrated database retrieval system
