Viruses: 59227024
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Entry
59227024 CDS
T40000
Symbol
EP1242L_CDS, IM014_gp087
Name
(RefSeq) African swine fever virus; hypothetical protein
KO
K26373
Asfivirus DNA-directed RNA polymerase RPB2 [EC:
2.7.7.6
]
Virus
10497
African swine fever virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
Vog
Vog cluster
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
59227024
NCBI-ProteinID:
YP_009927177
RS:
NC_044959
LinkDB
All DBs
Position
NC_044959:complement(67499..71227)
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AA seq
1242 aa
AA seq
DB search
MEPLRPQITYGPIETVDNEELTEADMLSFISAAVNSTGLIGYNIKSFDDLMDNGIPQIVK
QMFNVDITYKDQRDHTEIDKLRESVQIQFNFTDVNIERPQHRNYSQGNKINLLPNKARLC
GLSYSGPVNLAAEVILTAHYSNGRQEVKRASIPPFQVSTFPIMRGSNRCHTHHLSKTAKK
EIGEDPNEPGGYFIARGGEWVVDLLENIRFNTLHIHYHTMQQGNNEIIRGEFISQPGGAF
ENSSQIIIRYMTTGAITIEINSTKFSKLRIPWYLIFRMFGMTGDDSIIEQVVFDLESNSL
VNTFMIEILEKSIHVLDPIFQPVQHELNREKIIQFLSEKVSKFVSNPSAYKSDENAVQYL
NERQLTILDKILLPHMGQTADTRVRKLRFLGLLIHKILLVIMNVFPPTDRDSYRTKRVHG
SGVSLAKAFKAIFNTSVIAPIINGFKELLKQTAFEELTQRNIIEAFSAALSKNTASDLNR
SMEQSIISGNKTIMVRQRPIVNRVSTQSLERKNLLNTISALRTVNTHNTTNASKQTERAD
MMRRVHASYPGYICVAQSADTGEKVGMSKQLAITANVCTAGEVLSLKQRLLSDPAIQQLA
DVSNKDIVRKGLARVFINGEWIGCCTNAFELAQRYRMLRREGKVVHPHTTIYWDSMVDEV
EFWLDVGRLTRPLLIVDNNIEKYNQACYKAAEARKKGDKDWEKHKIPFIQNTRFTPQMAK
DILAGTLTLEDLVAQGICEFITPEEAENCLVAFSIIELRKHKHDVTRRFTHVDVPQAILG
LAALVSPYANCTQPARVTYETNQGRQTGGWYCFSWPYRVDMNRFFQFYNEMPLVKTIAHN
YVIPNGLNTIVAYMIYGGYNQEDSVIVSQSFIDRGGFAGTFYREEKVELESDIESFGKPD
PLITKNLKPGANYEKLVDGFVPVGTVVKKGDIIIGKVAKIRGEKDELNKYIDRSVMYGFD
EPAVVDAVMRPHGPNDEIFGLMRLRYERNLNIGDKMSSRSGNKGIAALALPTSDMPFTED
GLQPDLIVNPHSHPSRMTNGQMIETTVGLANALQGVVTDGTAFLPINVQLLSERLAQEGL
RFNGCQKMFNGQTGEYFDAAIFIGPTYHQRLQKFVLDDRYAVASYGPTDALTGQPLDGKR
SHGGLRLGEMEHWVLTAQGAMQTIIEKSHDDSDGCISYICRNCGEPAIYNASHPIYKCMN
CDVQADIGMVDSRRSSIVFQHEMRAANVNITSVLSPRVFQPA
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atggaacccttgcggccgcaaataacctacggccccattgaaaccgtggataatgaggag
cttacagaggctgatatgctgagctttatctccgctgcagtaaactctacaggattgata
gggtataacatcaaaagcttcgacgatcttatggacaatggaattccgcaaattgtaaaa
caaatgtttaacgtggatattacttataaagaccaacgcgaccatactgaaatagataag
cttcgggaatcagttcagatccaatttaactttacagatgtgaacattgaacgcccgcaa
catcgaaactattcacagggaaacaagataaatttactacccaataaggcacgcctgtgt
ggcctttcctattcgggcccggttaatctagccgccgaggttattttaacggcgcactac
agcaatggtcggcaggaggtaaaacgagcaagtattcctccttttcaggtatctacattt
cccatcatgcggggcagcaaccgctgccacactcatcacctatcaaaaaccgcaaaaaaa
gaaataggagaagaccctaatgaacccggcggctactttatagcccgaggcggggaatgg
gtcgtagacctcttagaaaacatccgctttaacacgcttcacatccattaccataccatg
caacaagggaataatgaaatcattcgcggcgagtttatctcccaaccgggaggtgccttc
gaaaatagctctcaaattattatacgctacatgaccaccggcgccattaccattgaaatc
aatagcaccaagttctcaaaacttcgcataccttggtatctcatctttcgcatgtttgga
atgacaggcgatgacagcatcattgagcaagtggtatttgatctagaatccaactccctt
gtgaataccttcatgatagaaattctggaaaaatccattcatgttttagaccccatattt
caaccggtccaacacgagctgaaccgagaaaaaattatccagtttttatccgagaaggtt
tccaaatttgtctcaaacccatctgcttacaaaagcgatgaaaatgcggtacaatactta
aatgaaagacaacttactattttagacaaaatattgctgccacacatgggccaaaccgca
gatacacgtgtacgaaagctgcgctttttaggcctgcttattcataaaatacttcttgtc
attatgaatgtgtttccacccacggaccgtgatagctaccgcaccaagcgggtgcacggc
tcaggggtctcactcgccaaggcctttaaggctatttttaatacttccgtgatagcaccc
atcatcaatgggttcaaagaacttcttaaacaaacagcctttgaggagcttactcagcga
aacattatcgaggcattttctgccgctttatcaaaaaataccgcctccgatcttaatcgc
agtatggaacagtctatcatttcaggaaataaaaccatcatggtgcgacagcgccccatt
gtaaacagagtatctactcaaagtttggaaagaaaaaatttattaaataccatttcagca
ttgcgtacggtaaatactcataacaccaccaacgcatccaaacaaacagaaagggctgac
atgatgcgtcgcgtgcacgcatcctatcctggatacatctgcgtagcccagtcagccgat
actggtgaaaaagtaggcatgtctaaacagttagccatcactgccaatgtctgcaccgcc
ggagaagtactttcgttaaaacaacgccttctatcagatccggccattcaacagttagcc
gatgtttccaacaaggacattgtacgaaagggcctagcgcgcgtatttatcaacggagaa
tggatcggctgctgcaccaatgcctttgagcttgctcagcggtatagaatgcttcgccgt
gagggcaaggttgtgcatccccataccaccatctactgggatagcatggtagacgaagta
gaattttggttggacgtcggtaggctgacccgccccctactcattgtagataataatatt
gaaaaatacaatcaagcctgctacaaggccgcagaggccagaaaaaaaggcgataaagac
tgggaaaaacataaaatccctttcattcaaaatacgcgatttacgcctcaaatggcaaaa
gacattttagccggaacgcttacacttgaagatctcgtagcacagggcatctgtgagttc
attacccccgaggaggcggaaaactgtcttgttgccttctccatcatcgagctacgcaaa
cataaacatgatgtaacgcgtcgtttcacacacgtggacgtgccccaagctattttgggc
cttgccgccctagtgtccccctacgcaaactgtacccaacctgcgcgtgttacctatgaa
acaaaccaaggccggcaaacggggggctggtattgctttagctggccatatcgtgtcgac
atgaaccgcttcttccagttttacaatgaaatgccgcttgtaaagaccatagcacataac
tatgtcatacccaacgggcttaataccattgtggcttatatgatctacggcggctacaat
caggaggactctgtgatcgtgtcgcagtcctttattgacaggggcggctttgccggcacc
ttctaccgagaagaaaaagtagaattagaaagcgatatagagtcgtttgggaagcccgac
cctttaatcaccaaaaatcttaagcctggtgctaattacgaaaagcttgtagatggattc
gtgcccgtaggaacggtggtcaaaaagggcgacatcattataggaaaagtggccaaaata
cggggcgaaaaagacgaactcaacaaatacatcgaccggtctgtcatgtacggcttcgat
gagccggccgtcgtggatgctgtgatgcgtccccatgggcctaatgacgagatctttggc
ctcatgcgcctgcgctatgaaagaaatctcaatataggcgacaaaatgagttctcgcagc
gggaacaagggcattgcggcgctggccctgcccacttcagacatgcccttcacagaggac
ggattgcagcccgacctcattgtaaacccccactcacatccctcccgaatgaccaacggt
caaatgatagaaaccacggttggtctagcaaatgccctacagggggtggtaacagacggc
accgcattcctgcctattaatgtgcagcttctttcagaaagactggcgcaagaaggtcta
cgcttcaatggatgccaaaaaatgttcaacggccagaccggcgagtactttgatgcggcc
atcttcataggaccgacctatcaccagcgcctgcaaaaatttgtgctggatgaccgatac
gccgttgcaagctatgggcccacggatgccctcacaggccagccgttggacggcaaacga
tcgcacggaggtcttcgtctgggagaaatggagcattgggtgcttacggcgcagggcgcc
atgcaaaccatcatagaaaaatcgcacgacgactcggatggctgcatctcctacatctgt
agaaactgtggcgagcctgccatctataacgcgagtcatcccatctacaagtgcatgaac
tgtgatgtccaggccgatatcggcatggtagatagccgtcgctcttccatcgtatttcaa
cacgaaatgcgagcggccaatgttaatattacatccgtgctttcaccaagagtttttcaa
ccagcttaa
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integrated database retrieval system
