KEGG   Viruses: 6172370
Entry
6172370           CDS       T40000                                 
Symbol
HpMV_gp1
Name
(RefSeq) Hop mosaic virus; replicase polyprotein
  KO
K26628  Betaflexiviridae RNA replication polyprotein
Virus
142843  Hop mosaic virus
SSDB
Motif
Pfam: Vmethyltransf RdRP_2 Peptidase_C23 Viral_helicase1 2OG-FeII_Oxy_2 bpMoxR AAA_19 AAA_5 AAA_18 AAA_22 nSTAND3
Other DBs
NCBI-GeneID: 6172370
NCBI-ProteinID: YP_001798592
RS: NC_010538
UniProt: B2CML7
LinkDB
Position
NC_010538:71..5962
AA seq 1963 aa
MALTYRTPMEDIVISFEPQTQAVIAEKAAKIYKQLEEDNCHLFNYFMPPLAKKKLSQAGI
YLSPFSAVVHSHPVCKTLENYILYTVLPNYIDNRYFFVGIKNRKLQLLKSRKKNLDNVSC
INRLVTSADKLRYSNDLISYQSVSHADLRRHGAGLDEPALRGIVGPLSRHKAKYLFLHDE
LHYWNSKTLCTFLNVMQPEVLLATVVYPPELLFKQTKSLNSWCYTFDVIGDTLMFFPDSV
RSEGYQQPLNGGYLLSCNKIILDNGVTYMVDVLCSKFAHHLVAITRGEAESCKHRAFGPF
EATESRQLAKLCPGYPICLPLPCDVINKVYRYLRTLKKPDAQSAMAKLSQIVAEPSGEEI
DFIEDFARLVIKNESFCSTIVPERLKIFAGTWLGRLPSVLADKFKVVNEVSLTDFIKGLR
PFNHTLELKQIRQFSLWDDVCNWVALESDPESPILREFSSPVYPGCYLGRVSEPYSGMCG
LTERAWEPLLHGLSELLPMALIKLYAREKFSPLCRTISISELEGFMSYRIGRCLLFAGRE
RKGHESTRIPLASVLGLEKLSDLVRYLRERWISKLRYTIWEMGVCWFGMYDRYCARYLDR
CESTPGRFKSLGTLWEVVCAEVVSKASRRNQFRGTEGPGLGGSPVAPAVLVDLGASTEGG
GFERSLNCSCGVEMQLTTLTYPEHPFIAPDQLRGRRAGWYSKGGVDYTYNGGSHKSLGWD
ELIELWCEVNGLDEKYDSCLYQVYQAGGRIGYHADDEAIFEPGESILTVNLSGSATFGVR
CAAGHGECVLAAEEMFTMGKGFQANHKHSVFGCTGGRESLTFRCLKKVATSPLPPILAPA
CDLNLGDSDSATPNDLTGYTTEVSAVHLTVEPIPASAAYLVKPVPGDGNCFWYSVAELQG
LDALEFKRLCMMHEFDEAHWTTELRGCKPAGAFTTDAGIVAAAARLHARINIWNIDTGYI
HVYSVDNYEASLNIILRGVHFEPMRLKNGCVITSVADGLGRKESEVQAVLEQQAAPSLLD
EIWSGLGLTQIGMELVFKCFDIAAHVVEEGKVALYNESGSLHLMFNMESGHLSFNPRKKD
PPGLLLTNVPSSKKFPSCVLESIREGGTKLELKARLVDAGLLADSMHSAQTGVLGSALFN
NRPNMRDYFQSELVSQRTCLILGTFGSGKSSIFKKLLEHGHGKVFDYVSPRRALADEFKN
YFGISKRKKVGQENWCVSTYESFLCRAEFLVEGQVLVLDEIQLYPPGYVDLLLAVIKVPL
ELFLVGDPVQSDYDNEKDRLLLSVLESNCDHLLNNLNYKYNIRSRRFKNSNFIGRLPCEI
EPEGCSIGEPHVLRQYLENLGDLESEYSKVVLVSSFDEKMIVHSYQPKARVLTFGESTGL
TFTYGTVLITPVSERSNEKRWLTALSRFSMNVCLVNGSGLNYDHLAVKYRGRALSRFLSK
TAKVTDLSEHLPGEVIFTRSYLPRVGKDEGVREEKVIGDPWLKTMVSLMQAPDVSEEELI
ESALPEEWFRTHLPREELESVRAGWVHKILAKEDREVRMGDLVSSQFTDEHSKQDGGRQL
TNAAERFETIYPRHRANDTVTFIMAVKKRLSFSNPARERAKLFKANQYGKALLKKFLKHV
PLKSAHNTRFMEKAVWEFEEKKLSKSAATIENHSGRSCRDWPIDMGLVFSKSQLCTKFDN
RFRTAKAAQSIVCFQHAVLCRFAPFMRYIEMKVHEVLPSQYYIHSGKGLSELNDWVKRGS
FAGVCTESDYEAFDASQDEYIMAFELELMKYLGLXHDLVEDYKFIKTSLGSKLGNFAIMR
FSGEASTFLFNTLANMLFTFMRYDIKGNEFICFAGDDMCANKELKVTGAYKGFLDKLKLK
AKVQMTGTPTFCGWHLTPDGIYKKPQLVLERMCIAMELNNLHNCIDNYAIEVAYAYSLGE
KAVNRMSEEEVGAFYNCVRIIIRNKHLLKSEVRGVYEESKALL
NT seq 5892 nt   +upstreamnt  +downstreamnt
atggctctcacctaccgaacgcccatggaggatattgttatttcgttcgaaccgcaaacg
caggctgtgattgctgaaaaggccgcgaagatttacaagcaacttgaggaggataactgt
caccttttcaactacttcatgccaccactggctaagaagaagttgagccaggcgggtatc
tacttgagtccattctcggccgtggtgcattcacaccctgtgtgcaagaccttagaaaat
tatattttgtatacggtactgccgaattatatagataataggtatttctttgttggaatt
aagaataggaaattgcagctgctgaaatcaaggaagaagaatctggacaatgttagttgt
ataaataggttagtcactagcgctgataaactgaggtactcaaatgacctcataagctac
caatcagtgtcacatgcagatctgagacggcacggagcagggctcgatgaacctgcgtta
cgaggcattgttgggcctctgtcaagacacaaggccaaatatttgttcttgcatgatgaa
ttgcactactggaatagcaagaccctgtgcacgttcttgaatgtcatgcagcctgaagtg
ctcctcgctaccgtggtgtatccacctgagttattgttcaagcagacaaagagcttaaat
agttggtgctacacttttgatgtgatcggagatacactgatgtttttccctgacagcgtg
aggagtgaaggctatcaacagccgctgaacgggggttatcttctgagctgcaataagata
attctggataatggggtgacttacatggtcgacgtgttgtgcagcaagtttgcgcaccac
ctagttgccataacccggggtgaggccgaaagttgtaagcatagagcttttgggccattt
gaggctactgaatcgcgacaactggctaaactatgcccagggtacccaatctgcctccca
cttccctgcgacgtgatcaataaggtgtatcgttatctccgcacactgaaaaaaccagac
gcacaatcagccatggctaaattgagtcaaatcgtagcggagccgtcgggagaggagatt
gacttcatagaggatttcgccaggttggtcataaagaatgagagcttctgcagtacgatt
gtcccggaacgtctcaagatctttgccgggacgtggttgggccggttgcccagcgttctt
gcagacaagttcaaagtggtgaatgaggtgagtttgacagattttatcaaggggttaagg
ccattcaatcacaccttagagttaaagcagataaggcaattcagcctctgggatgacgtt
tgcaactgggttgccctagaatctgacccggagagtccaatcctacgagaattttcaagc
cctgtttacccaggatgttatttgggtcgagtgagtgagccctactctggtatgtgtggc
ttgactgagcgggcgtgggaaccactgttgcatggtcttagtgaattgctacctatggca
cttatcaaactatacgcccgagagaagttttcaccgctttgcagaaccatatccatttct
gagttggagggtttcatgtcgtacagaattgggcgttgcttgctcttcgccggtcgtgaa
aggaaagggcatgagagtacccgaatacccctagcaagcgtcctaggcttggaaaagctt
tctgatcttgttaggtaccttcgtgaacgttggatcagcaaactgaggtacacaatctgg
gagatgggggtttgctggttcgggatgtatgataggtactgcgcacggtacttagatcgg
tgtgagtcgaccccagggcggttcaaatcgttagggacgctttgggaagttgtgtgcgct
gaggtggtcagcaaggcaagtagacgtaaccaattccgaggcacggaagggcctggtttg
ggtggcagccccgtagctcccgccgtcctcgtggacttgggggcgtcaactgaaggcgga
gggtttgagcgaagcttgaattgctcctgcggagtcgagatgcagttgacaaccctaact
tacccagaacatcctttcatagctccagaccaactacggggtaggagagcaggttggtac
agcaaaggtggcgttgattacacttacaacgggggttcccacaagtccctaggatgggat
gaattgatagagctttggtgcgaagttaatgggttggatgagaagtatgatagttgcttg
taccaggtgtaccaagccggcggccggatcggctaccatgctgatgatgaagcgatcttt
gagcccggcgagagtatactgacggtgaatttgagtggttcagcgacttttggagtcagg
tgcgcggcgggccacggcgagtgtgtgttagcagcagaagagatgttcacaatgggcaag
ggatttcaggctaatcacaagcatagtgttttcgggtgcactggtgggcgtgaaagtcta
acctttcgctgtttgaagaaagtcgccaccagcccactcccaccaatcttagcaccggcc
tgtgatctgaacctcggagatagtgattcagcaaccccaaatgatttgaccggttacacc
actgaagtcagcgctgtacatctcacggttgaaccgatacccgcaagcgcagcctatcta
gttaaacctgttcctggagacggtaattgcttctggtatagcgtggcagaattgcagggt
cttgatgccctggaattcaaacggctctgcatgatgcatgagttcgatgaagcgcattgg
accacagagctacgggggtgcaaaccagcgggggcattcacgacagatgctgggattgtg
gcagctgccgccagactccatgccaggatcaacatctggaacatcgatactggctatata
cacgtttattctgtggataattatgaagcatccctgaatatcattttacgaggcgtacat
tttgagccaatgcgtttgaaaaatggctgcgttatcaccagtgtcgcagatggactgggc
cgtaaggaaagtgaagtgcaagcggtacttgagcagcaagcagcacccagtttattggat
gagatttggagtggactgggcctcacacaaataggcatggaattggtcttcaaatgcttt
gacatagccgcccatgtggttgaggaagggaaggtggccctttacaatgaaagcggtagc
ctgcacctaatgttcaacatggaaagcgggcacctgagtttcaacccaagaaagaaagat
cccccgggtctacttttaacaaatgtacctagtagtaagaaattcccatcatgtgtgcta
gagtcaataagggaggggggcaccaagctggaattgaaggctaggctcgttgatgctggt
ttgcttgctgacagtatgcatagtgcccaaacaggtgtcctgggttcagctttgttcaat
aacaggccgaacatgcgcgattacttccagagtgagttggtgagtcaaagaacttgcctg
attctgggcacttttgggtcaggaaaaagcagcatattcaaaaaattgctggagcatggc
catggtaaggtatttgattatgtgtcgcccaggagggctctagctgatgagttcaagaac
tactttgggataagcaagcgcaaaaaagttggccaagaaaattggtgtgtcagcacttat
gaaagtttcctatgcagagccgagttcttggtcgaagggcaagtgctggtacttgatgag
atccagctgtacccccctggctacgtggatttattgctcgctgtgatcaaagtgcctctt
gagttattccttgttggtgaccccgttcagagtgattatgacaatgagaaagatagatta
ctgctttcagtgttggagagcaattgcgaccacttactaaacaatttgaattacaagtac
aatattcggagccgtaggttcaagaatagcaatttcattgggagactcccttgcgaaatc
gagccagaggggtgcagcattggtgagccacacgtattgcggcagtacctggaaaacctc
ggagatttagagagtgagtatagcaaggtggtgttggtaagttcttttgatgaaaaaatg
attgtgcatagctatcagccaaaggcccgggtgctcactttcggagaaagcaccggctta
actttcacttacggtacggtgctcattacgccagtgtccgaaaggtcgaatgagaaaagg
tggttaacagccctcagtcggtttagcatgaatgtttgcctggtcaatgggagtggttta
aactatgaccatctagcagtgaagtaccgggggagggccctttctaggttcctcagcaag
acagcaaaagtcacggacttgtctgagcacctccctggtgaggtgatcttcacaaggtct
tatctcccaagggtggggaaggatgagggcgtgagagaggagaaggtcattggggaccct
tggttgaagaccatggtctcgctgatgcaagcgcctgacgtatcagaggaagaattgatt
gaatccgcgttgcccgaagaatggttcaggacccacttacctagggaggaattagaaagt
gtgagggccgggtgggtccacaagatcttagcaaaggaggatagggaagtaaggatgggt
gatctggtgtcaagccagttcacagatgagcactcaaagcaagacggtggaaggcagctc
accaatgcagcagagaggttcgagaccatttaccccaggcatagagcgaatgatactgtg
acctttatcatggctgtgaagaagcggttgagcttctcaaaccccgctagagagagggcc
aaattgtttaaagcaaaccagtatggaaaagccctccttaagaaattcctaaaacatgta
ccactcaagtcagcgcataacacaaggttcatggagaaagcagtttgggaattcgaggag
aagaaattgagtaagagcgccgccactatcgaaaaccacagcggtaggtcgtgcagagat
tggcctattgacatgggtttagtcttttcaaaaagccaactttgcaccaagtttgacaat
cgttttaggactgcaaaggcagctcaaagtatagtatgtttccaacatgcagtcttgtgt
aggttcgcaccgttcatgcggtacatcgagatgaaggtacatgaagtgctacctagccag
tattacattcactcaggtaaagggctcagcgaattaaatgattgggtcaaacgaggaagc
tttgccggagtttgcacagaatctgattacgaggcttttgatgcgtcacaggatgagtac
atcatggctttcgaattagaattaatgaaatacctgggtctgycccacgatttagttgag
gactacaaattcattaagacaagcttgggctccaaacttggcaattttgctattatgcgg
ttctcgggtgaagccagcacgttcctcttcaacaccctggcgaatatgctgttcacattc
atgcgttatgacattaaaggcaatgagtttatatgtttcgctggtgacgacatgtgcgcc
aataaggaattgaaggttactggggcttacaagggtttcctcgacaagttgaagctgaag
gccaaagtccagatgactggaacacccactttttgcgggtggcacctgactcccgatggc
atatataagaagcctcaattggtgctggagaggatgtgcatcgctatggagttgaataat
ctgcacaattgcatcgataattatgcaatagaggtggcgtatgcctactctcttggtgag
aaggcggtcaatcgcatgagtgaggaggaagttggcgccttttacaactgtgtacggata
atcataaggaacaagcatctgytaaagtctgaagtccgtggggtctatgaggagtccaaa
gcacttttgtag

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