Viruses: 6302929
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Entry
6302929 CDS
T40000
Symbol
RaMV_s2gp1
Name
(RefSeq) Radish mosaic virus; RNA2-polyprotein
Virus
328061
Radish mosaic virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Como_LCP
Como_SCP
Nepo_coat
MP
Motif
Other DBs
NCBI-GeneID:
6302929
NCBI-ProteinID:
YP_001911127
RS:
NC_010710
UniProt:
A7M6L2
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Position
NC_010710:417..3704
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AA seq
1095 aa
AA seq
DB search
MTYFSPQNHFVNYILARHGCDEDSGDFRVSPQQKYNELLVQSPLKFVFFIFFFHFVVFIE
RLFGFRFAADSWLSYRFQGLWRSLRKPIEFAKARKAALAEFSPQPFVFLDPIITYSADSF
IDMEQVMERGVAAKALMVQDKVSINKKHKYEGIKDCIPSGKDMYVFRQKMFDMLMRRRRS
KEVDITRIEGSEIIETKHMDVGTLTPGENVVLNVKLVDDDRALSSRASDYTLHHSVRESK
YATAMHVGAIEVIFDSFASPSSDIVGGMVLVDTAHKTVENAVRSVFVTGLAGGKMIRVLM
YPNTLVEIGPKMNERFKLVCTTSNSDIADGFNLAAVKVNVVGCTQSLTARYVPQPFLEQC
LNEERGTVVEYLGQMSYVMHNSNEISEEFLAQQTMAFDLGSNLRLQGSSSGASLQRSTSM
KYLVGPRQSFKQLELDKEPSAFERKRLEAKDGADKFRDSTFVDPVYGKTRRAFGQTSMTR
SLLNRFSSANETEGTPLDTKIARTKILLTKVMAGGKILYTARLSDVLLNKDQRAAISFQR
THVQHRKLVALATLGVPENTGCALMMCYNSGVRGKAVVDAYTASAEASVIWNPACQRQAV
LEIDVNPCQSGWSYQYLRQTNSYFNVVCISGWTTTPLTDLSMTIDWYLSSEESVTSIYYA
SGGNSVIKLNRWMGRLIFPQGTETTMQRMPLAIGGGAGGNGLVYMNMPNALCSLWRYIRG
GVKFEIIKLSSPYVKATIAFFIAFTDVDATSPNLEAYPHKLVQFAEIQDRVTIEFDKDEF
VMAWSSQVHTNVPLDQDGCPYLYAVVHDCAGSTIPGDFNIGVVLKEMVDVEAIGRHPGWK
GARPLPASPQGLRKSASGVWNELYTIRGPPEAKSTEVVQFAIDLVGVGISTAGRGTWSLE
TSNSPMNNLLRTATWKSGTVHFQVLMEGNPLVKRGDWASYCEISLVQSAKDTTLSSRNWV
MKDPSSWELEFDVKIEGPNAGFENWEAHLSNQTSWYLTFAVYNPDQTTVFTVNGMLNDDF
CCAGNTLMPPFLEPQSITSDRTPLSQMIFNYEDNLVRDTDPPDPDNVRERAETSSDHERR
LQQQKKRGFNNKFAF
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atgacttacttttctcctcaaaatcattttgtgaattacatattagctaggcacggttgc
gacgaggattcaggggacttccgagtctctcctcaacaaaaatacaacgaattgttagta
caatctcctttaaagtttgttttctttattttctttttccattttgtagtttttatagaa
cgcttgtttggattccgatttgctgcagacagttggttgtcataccgctttcaaggtttg
tggagaagtttaagaaagcccatcgagtttgccaaagctcgaaaggctgctctagcagaa
ttttcaccgcaaccattcgttttcttagaccccattattacatattcagcagatagtttt
atagatatggaacaagttatggaacgtggagtggcagcgaaagccctgatggtgcaagac
aaggtgtcaattaacaagaaacataagtatgagggcatcaaggattgcattccgtcagga
aaggatatgtacgtttttcgccagaaaatgtttgacatgttgatgcgccgaagaaggagc
aaggaagtcgacatcactcgcattgaagggagtgaaataatagaaacgaaacacatggac
gttgggactttgactcctggcgagaatgttgtgttgaatgtcaagcttgtggacgacgat
agagctctaagcagtagggctagcgattacactcttcaccactctgtgcgtgaatcaaag
tatgccacagccatgcacgttggagctattgaagttattttcgatagttttgcgtcccct
tctagtgatatagttgggggaatggttttggtagatacagcccacaaaacagtcgaaaat
gctgtgcggagtgtgtttgtgacaggattggcaggtgggaagatgatacgtgtactcatg
tacccaaatacgctagttgaaatcggacccaaaatgaatgagagattcaagttggtgtgc
actacttctaatagtgatattgcagatggttttaacctggctgcagtcaaagtcaatgta
gtgggatgtactcagagtttgactgcacgatatgtgccacaaccgtttctggaacaatgt
ctcaatgaggagcgtggcaccgttgttgagtacttaggacaaatgtcctatgtgatgcac
aattccaacgagatatctgaagaatttctagcgcaacagacaatggcatttgatcttgga
agcaacttgcgtttgcaagggtcttcatctggagcatccttgcagcgctctacttcaatg
aaatatttggttggaccaagacagagctttaaacagctggagctggacaaagagccatcg
gcatttgaaaggaaaagacttgaggcaaaggacggtgcggacaagtttcgagattcaacg
tttgtggatcctgtatatgggaaaacgagaagagcttttggacagacttctatgacgcgc
tctctgctcaatagattttcctctgccaatgaaacggagggaactccgcttgataccaag
atagcaagaaccaagattttgctcacaaaggtaatggcagggggaaaaattttgtacaca
gcgcgcttgagtgacgttctcctaaacaaggatcaaagagctgctatttcctttcaaaga
actcacgttcaacataggaaattggtggctttagctacgttaggagtgccagaaaacact
ggatgtgctctaatgatgtgctacaacagtggagtacgaggaaaagcagtcgttgatgcc
tatacagcgtcagcagaagctagtgtgatttggaatccagcctgtcagcggcaagcggtg
cttgaaatagatgtgaatccatgtcaaagcggatggagctaccagtacctcagacagacc
aatagctacttcaacgtagtgtgcatctcgggttggacgacaactcccttgacggacttg
tccatgaccatagactggtatctgagttctgaagagagtgtaacttccatatattatgct
tcaggtggcaattctgtgataaagctgaataggtggatgggacgtttaattttcccacag
ggaacggaaacaaccatgcaacgtatgcccttagctataggaggtggtgcaggaggaaat
ggactggtgtacatgaatatgccaaatgctttgtgttctctgtggagatatatcagagga
ggagtcaagtttgagataatcaagctaagctctccctatgtaaaggcaaccatagctttc
tttatagcttttactgatgttgatgccacttcgcctaatcttgaagcatatcctcacaag
cttgttcaatttgcagaaattcaggacagagtgacaatcgagtttgataaagatgagttt
gtcatggcctggtcctcgcaggttcataccaatgtgcctctggatcaggatggctgtcca
tatttatatgcagtggttcacgattgtgcaggatcaaccattcctggtgattttaacata
ggagttgttttaaaagaaatggttgatgtagaagccataggcagacatccaggatggaaa
ggggctcggcctttgcctgcgtcaccccaaggactgcgtaagagcgcgtcgggtgtgtgg
aatgagttgtacacaattagaggtcctcccgaggccaagtccaccgaggtcgttcagttt
gccattgatctcgtgggcgttggaatttctaccgcaggacgtggaacatggtcgttggaa
actagtaacagtcccatgaacaacttgctgcgtacagccacgtggaagagtggaacagtc
cattttcaagttcttatggagggaaatcctttggttaaaaggggagattgggcttcttac
tgtgaaatttcattagtccagagtgctaaagatacaacattgtcgagccgtaactgggtc
atgaaagatccctcatcatgggagctggagttcgatgttaaaattgaaggacctaatgct
ggctttgaaaattgggaggctcatctgagcaatcaaacaagttggtatctaacgtttgca
gtttacaaccctgatcaaaccactgtgttcactgtaaatgggatgttgaatgatgatttt
tgctgtgctggcaatacactgatgcctccttttctagaaccacaaagtataacttcagat
aggacacccctgtcgcagatgatcttcaattatgaggacaatttggtaagggacacagat
ccaccagatccagacaatgtacgggaaagggcggaaactagcagtgatcatgagcgtaga
ttgcaacagcaaaagaagcgtggtttcaacaataaatttgcattttag
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integrated database retrieval system
