Viruses: 65101057
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Entry
65101057 CDS
T40000
Symbol
KM546_gp22
Name
(RefSeq) Porcine lymphotropic herpesvirus 3; major capsid protein
Virus
199308
Porcine lymphotropic herpesvirus 3
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Herpes_MCP
Motif
Other DBs
NCBI-GeneID:
65101057
NCBI-ProteinID:
YP_010085973
RS:
NC_055234
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Position
NC_055234:35585..39715
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AA seq
1376 aa
AA seq
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MQNMMEVSKLENRPIPYSLTEANLLRQVKESAAEGLFKSFQLLLGKDVRENSVKFEVLLG
VYTNAIQFVKFLETALAISCINTEFRDLKRMVDGKIQFKISVPTIAHSDGRRPNKQKQYI
VMKTCNKHHISAEIELSMTDIENMHLEPETPLDMTEYIGTVKTITSALQFGVDAMERGLV
DTVLTVKLRHAPPLFILQSLSDPVYTERGLKKTVKSDLVAMFKDHLINHSFFMDKSEFST
NGKQYIIRILTDLINSVSDETVFKGMTTYTTDNDEPITGVIETTDNIMRKILSILGEYRD
TVIGPAAYASYVIRGENLVTAVSYGRAMRSFENFINRLVENPSQQDTIANHYEGLTNNYG
SLPKTSIPVSVIKIGNQNIALESLQRMYNEAQCPFPLNRKMQYAYYFPVGLYMPRPRYTT
STMVKMEDDHFLSTEAWIVNKNNTPLCFNYQNSLKTICHPRVHNPGPSLQALQVAFPEID
EALHYGVHSRPMGNMNLFELIEQYYDNKNDAICLPIAQACNMSTDDFLHPTNHMLLRMEL
NPMFDFYAEMLDGNGAAYRHSHRIMSGNLPQPLAPNDFHEARGRQFESATNFNHVIDDST
LEIIQNTAFDTTYPILCYVVEAMIHGQKEKFLMNMPLIALCINTYWANSGHIAFVNSFFM
VKNICTYMGSGMINKDVYAIYRKIIGEIVTLKHALIKMIGTDTVDRVDIQGYINAIFDKN
LLPPFAYDDIFSHLLEENDEIKFRVGDTMFGNGDRSDDFIETILDLESANNVSANIYNAR
NTVNWDQFQKLQLAAGRENMESLILEKIYYYIFLPVCTNGHMCGMGADFEHIAMALGYNG
PVFGEMFNGTDTILEHLENGTLRDILVASEINPTIQMLRILGISYINCPQISQAVRVIGQ
RDICQRLGPDRNAYAEHTVLINSFVCFGIPERIRPTAATIFYPVPFHQFYCDPLVAANWN
NPVQMFVVSNSGQRTPETFNVPDELMAEYTEWHRAPMTKYVTSCRPTTQALSTLTVMHNK
LSPIAFICQSKNKIHPGFSLTVVRTDEVLSENMVYSGRASTSVFVGQPSVSRREVRADAV
GFDIHHELASLDTGLRYSSATASAHVATITTDMGIHCQNLFAAFPNELYNHRNINNYIAQ
KIGVENSVNRHDPRTFIAGIGNSTNIPGLSHGQYSICEVILTPVTADVSYFQKPNSPRGR
ASCVISCDVNNHEKAEQFLYDHSLSDPAHEYRSTINPWASQKGSLGDILYNSTYRQVVAP
GIYSPCKSFFNKEELLKNNKSFYTMVNEYSQRVGGYAATSNTELQYVVINGTDLFLEQPC
IFIQEAFPTLSASHRAMLDEYMSAKSTHAPVHLGQYFIEETAPVKRVLKIGNKFSF
NT seq
4131 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacatgatggaggtcagcaagcttgaaaataggccaataccttactcgttgaca
gaagccaaccttctgcgtcaggttaaagaaagtgcagccgaaggtctgtttaagagcttc
caattactacttggaaaggatgttagagaaaacagtgtaaaatttgaagtcttattgggt
gtatatacaaacgccattcaatttgtcaaatttctagaaactgcactggctatatcctgt
atcaacacagagtttagagatttgaaaaggatggtggatggcaaaatacagtttaaaata
tctgttcctactattgcacatagtgatggaagaagaccaaataaacaaaaacaatatatt
gttatgaaaacctgcaataagcaccacataagtgccgagattgaactttccatgacagat
attgaaaatatgcacttagaacccgaaacacccttggacatgacggaatacattggaacg
gttaagaccattacttcagccttacaatttggagtggatgctatggagaggggtctggta
gatactgttctcactgttaagttaaggcatgcaccaccactttttatccttcagtcttta
agtgatccagtgtacacagaacggggccttaaaaagactgttaagtcagatctggtggcc
atgttcaaggaccatctcattaatcactcattctttatggacaagtcagagttctcaacc
aatggtaaacagtatatcatcaggatactcacagatctcataaactctgtttcagacgaa
actgtctttaagggcatgaccacatatacgacggacaatgatgaaccaattactggggtt
attgaaaccacagataatatcatgagaaaaattttgtccatcctaggtgaatacagagat
acagttattggtccagctgcatatgcctcctatgttatacgaggcgagaatttagtaaca
gctgtcagctatggcagagccatgagatcgtttgagaattttatcaacaggttagtggaa
aatccaagtcaacaggatacaatcgccaatcactatgaggggttgaccaacaactacggc
tctttgcccaaaacatccatacccgtgtcagttataaaaattggtaatcaaaatatagca
cttgagagtctccagagaatgtataacgaggcccagtgtccctttccactcaaccggaaa
atgcaatatgcttactattttccagtaggcttatacatgcctcgacctcgatataccacc
tctaccatggttaaaatggaagacgatcactttctgtccacggaagcatggattgtgaac
aaaaacaacactcctctatgctttaattatcaaaacagtttaaaaaccatatgccatccc
agagtccataatccaggtccatccctccaagccctacaggttgcctttcctgaaattgat
gaggctctacattatggggtccattcaagaccaatgggaaacatgaatctatttgagctg
attgagcaatattatgacaataaaaacgatgccatatgtttacccatagcccaggcatgt
aacatgtcaacagatgactttctacaccctaccaaccacatgttacttcgcatggagctc
aacccaatgtttgacttttatgcagaaatgcttgatggaaatggtgctgcatataggcat
agccacagaataatgtctggtaatctgccgcagccgctggcacccaatgatttccatgag
gccagaggtaggcaatttgaaagtgcaactaatttcaaccatgttattgatgatagcaca
ctggaaattatacaaaacacggcatttgataccacctatccaattctgtgctatgtggtt
gaggctatgatacatggacaaaaggaaaagtttttgatgaacatgccccttattgccctt
tgtatcaacacatattgggccaattctggacacattgcctttgtcaacagctttttcatg
gttaaaaatatatgcacatatatgggcagtggaatgattaataaggatgtgtatgccatc
tacagaaaaattattggtgagattgtcaccctgaaacatgctcttataaagatgattggt
actgatactgtagaccgagtagacatccaaggctatattaatgctatttttgataaaaac
cttcttccaccatttgcctatgatgatatcttttcacatcttttggaagaaaatgatgaa
attaaatttagagtcggggacacaatgtttggcaatggggaccgctctgatgacttcata
gagactattcttgacctagagagtgccaataatgtgtcagcaaacatttacaatgcgaga
aataccgtcaattgggaccaattccagaaactgcaactagcagctggaagggaaaatatg
gagtcccttattttggagaagatatattattacatatttctacccgtttgtacaaacggt
cacatgtgtggcatgggagcagactttgaacacattgccatggcactgggctataatgga
cctgtatttggagagatgtttaatggaacagacaccatcctggaacatttggagaatggg
acacttagagatattctcgtggcatctgagattaatccaactattcaaatgctcagaata
ctgggaatctcttatatcaattgtccccagatatcacaggctgtaagagtcataggacaa
cgtgacatttgtcagagattaggacctgatagaaatgcttatgcagaacacactgtactc
attaattcatttgtgtgctttggaatacctgaacggataagacccactgctgctacaatt
ttctatccagtcccattccaccaattctactgtgaccctctagtggcagctaattggaac
aatccagtccagatgtttgttgtctcgaacagtgggcaacggacgccggaaacattcaat
gtacccgatgagcttatggctgaatatacagagtggcacagagccccaatgaccaagtat
gtaacatcttgccgaccaacaacacaggcactgagtacactgacagtgatgcataataag
ctatctccaattgcatttatctgtcagtccaaaaataagatacatcctggtttttcctta
acagttgtaaggaccgatgaagtgctttctgaaaacatggtttacagtggccgtgcatct
acctctgtatttgtggggcaaccttctgtgagcagaagagaggtgcgcgccgatgccgtt
ggatttgacatccaccatgaacttgcatctttagacaccggtctgagatacagtagtgcc
acagcatctgcgcatgttgccaccatcacaactgatatgggaatacactgtcagaatctc
tttgctgcatttcccaatgagctttacaatcatagaaatattaataactatatcgcccaa
aagataggggtagagaacagtgtaaataggcacgatccaaggacgttcattgccggcatt
gggaattctacaaacatacctggtctcagtcatggacaatattccatatgtgaagttata
ctaactcctgtaacagcagatgtatcctactttcagaaacccaatagtccgcgaggacgc
gcttcttgtgtgatttcatgtgatgtgaataaccatgaaaaggcagaacaatttctttat
gatcattccttatcagatcctgcccatgaatacagatccaccattaatccatgggcatct
caaaagggatccctaggggacattctctataattccacatatcggcaggttgtagcacct
ggaatctacagtccttgcaagtcatttttcaacaaggaagaactgttgaaaaacaataaa
agtttctataccatggtgaatgagtattctcagagagtgggtgggtatgctgcaaccagt
aacacagaattgcaatatgttgttattaatggaacagatttatttttggagcaaccatgt
atatttatacaagaggcatttcctacattgtcagcatctcatagagccatgcttgatgag
tatatgtctgcaaagtcaactcatgcccctgttcacttaggacaatattttattgaggaa
acggctcctgtcaaaagagtattaaagattggaaacaagttttctttctag
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integrated database retrieval system
