Viruses: 65101398
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Entry
65101398 CDS
T40000
Symbol
KM601_sLgp1
Name
(RefSeq) Tomato yellow ring virus; RNA-dependent RNA polymerase
KO
K26280
Tospoviridae RNA-directed RNA polymerase L [EC:
2.7.7.48
3.1.-.-]
Virus
304859
Tomato yellow ring virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Bunya_RdRp
CUE
Motif
Other DBs
NCBI-GeneID:
65101398
NCBI-ProteinID:
YP_010086214
RS:
NC_055413
UniProt:
K9L2Q0
LinkDB
All DBs
Position
NC_055413:33..8654
Genome browser
AA seq
2873 aa
AA seq
DB search
MNLQNVHSFLDITGQITVFLNDLREKLMILSNVIQTKYKDGSDAVSSGLKAIMSMSCVID
EIVDMKATYYQSTMSIDQKEMEKKIFIFIDKYKELELMRHDLFGVLASSKLHFAPKHRHD
VVMKDCILSYLEYCSVKQDISNKITDLDSITSQLVFQHQTPDNYVIYKETTGEKACLMIY
DWKVSVDTMTENKTSENYYTGIWKTFKDIKIDGEPFLSKFPIFVTIVVLQPMNFMPIVAT
TCRVLEEMRNSPYRTFVDRRNAALRTKLISSRDLRDLGGHDGSKLVGFYSECQAFKNLLM
SNIGDYMNRTDEVFFSNWSFEYKDTTLKDNLMSQDVVEIIKSLPNDTIKNDLMIHFIFGN
YVFYYKTMSDLHRKDKFEGYKSNCKLLKVKPKKTEEELKVYLEDNEVLFESLYSKHMDKI
KTDMIMKKSQEKEIKSIEESFNINAENYQAEYPGCFTNDLQQTKTNFSVCWSPSTEKLHV
GEMNFNNSIIENFRKCFDDEETLIHNKSYGGKNGQGEFSNTLFRLVKACIKSLSCDTTGQ
SKIRAEDVVDIKDGSIKISRESKEKSWKEIGNIKTRNGNEFTIGEKANKEVKSDFFKGLT
IMNIDMGKRKKNDHKLKLMEKLKESRVANEESQMKEGEYDVSSNMEVINMPLGSISHNKK
LIRHDNPDVKYWCNSMIQSMYALHGFDTRGKESGKINSVYSEYCNDPGKVFSKGKLIETE
MNISRNLHKVSQSLAVYSYSEDMMQIAKGLMVADRFMRKTDFKILTCANTSMICLAFKGD
GLNTGKSGVPYITLHKISELLQPYFVSLYTKELVVSFKSGDHYVNIMRPQRLNQVRLLSL
FKAPSKVPICFSQYCLLSTEVKRWISKKTIDLLECPSNLLPFLKNILFSSVVIGTVTKLS
RMGIFDFMRHAGFLPLSDYSNIKEYIAEKFDPDITNVVDCYFVSGIKNLLLKMEGINLSN
SIKPLTIDQENDMSGGINDLNIICPITGSTLRTIECLYNNVYLAIYMMPKSLHTHIHNLT
SLLNVPAEWEVKFRTKMGFGLDEEIVPKKEMFNDSGPFSIDGSLNVKTLFDYYLKTVDNV
SSTRSNIESKEDFLSTPYKIKTLTSSKKCSKAEIIKNSEIKQCLSNCLGRDPEKINGKDE
HILKGVLKCFVEDKDALRNFMTLEDLDESEYFHYFTMLTSGENKTLIKTSYDKFYSNSHP
TTVETFIKVRYGHMSTTTVLKSKKVSEELYDLIKEYNKITNLDLDALENLGRGLSGSKMT
FMQLLEFVLLKTRTNAGNTDFLVSVFEKMQRTKMDREIYLMSMKTKMMLYFIEHTYKHVA
QSDPSEAISISGDYKIKTLASLSYDTITNYNTALQKGLECKMAFLSADQSKWSASDLTYK
YILAVLMNPVLTTGEINMMCECILMYVKLKRVCIPTDVFLNLKRGQATYGSYGTAISSLT
NNLETNTFPVSMNWLQGNLNYLSSVYHSCAMLGYEKALKTNQDFEFTVRWMVHSDDNATS
VVVKGDMERFLSKFNCSNLSEFLFRSIQSHFKSYCITLNPKKSYASESEVEFISERIING
AVIPLYCRNLANCCTESSHNSYFDDLMSLSIHITMLLRKGCPNELITFAYSAIQCQALSI
YSMLPGEENDIVSIGKEVGFPLTKEEIPTCAGGWMRAPVEMLSILGPSSNDQYIYYKILL
EFFKQKDFSSLKAQVNSLGYVPLRINELNKRIARDALTKEDVKMICMVNLFKTSLMSEDS
DSLSIGMKFQTMMTQIIKLPSYVSESSLMKNSSFQDFCKLFPNLKKNSDLLKSLKKNQID
EDGIDDLAEDDSMLSRIQMEELYKHMSKHPEALLIAPMNDKDYILTNLYMYSSISKRNQM
SNQSTEKLALDRILRSKAKTFVDPNSKQMMTYKENMLSKLKEIMDKSANDYKIISTISDM
MVKDMNFEMIISLMENSVANASIPKANYNFRWFVTEKVPSIIEGSPGLIVMSAIYGMEYL
VELGLKRLPLTENSICILHDVFGNRKTFDDVKNYLTSKNSEMKTEEFILADDLKRGVLSL
NYMIQSQNKLLSLNTCFSRKNFPFYSKYNLGKTFITNTLALWSTIYSRTTNINFYTNLNF
VIDRNSRMIVSLQRDMSLEKLLDCCAYVSDRVQSLFPDMEIEDIRNILSKLNFNSINLLQ
KATSELKSVKRAISQIKTASHVTLSYRPQLMAMSKYAAWLYNFGYINEREFKFVIEQVRQ
SEVNYIKTDEQDTRGFYVSGISYKIGIKTLHNYAQLEMTNRDIAIHLNSPYEFIREEDNR
MWDTHVKSVYKLLQKLLIDKQSVLKTFLNMKVDVMPNEFCIHESSQKNLLIYINETNRVV
TLDKVKFKGKVKYNFSNNFTWSLMENNYNYMLRKAETGECFSELYKTIDSGSNLIENILK
NLKSSLIFNSEMENMLSKAVEGIEDEENKDIFVDSLKQIYDIAYKGLKECKSSEEFETYL
KENEFENLVEMQKEMLEVICQDLSDTDSRIQSVVDKLRVWSNNLSNFGDLCVMLKFSMVN
DSKGIRTYKANGIDFHSLSASESIICSDYDVFEMLKLIKACEACHTSNSTLNLIAFRDIK
NNKYVNPYRRRFGGSVYFYYPLKLNNDVMSKFYEHKTISLSDVEITESVRDILKQNGFTV
TGSNVKLESDMLELNPVLVTDEHSTFDTVSRQMRLTKKKSSYLVPANTLLLGELMKFLML
CIKGNEYDVQKMLSAHFDFTIERDDRMDSLIKSIMTLRASGYVQRYFTNTKEEEILLGAA
ASLENFMILSTPCGEFSEPFDVQKLIKNSLSEKNKDKKLKILLRIRSYISSKLDYLNDQC
IYKNTTSLEISDLIFSSINHIDREISELRSFDKTVYHDEFNEYLKDTEEANSD
NT seq
8622 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttcaaaatgtacacagcttcctagatattacaggccaaattactgtctttcta
aatgatttaagagagaagcttatgattttatcaaatgttatacaaacaaaatataaggat
ggatcagatgctgtctcttcaggtctcaaagcaataatgagcatgtcttgtgtcattgat
gagatagttgatatgaaagctacttattatcaaagcacaatgtctatagatcaaaaggaa
atggaaaagaaaatatttatcttcatcgataaatacaaagaacttgagctaatgagacat
gatctctttggagttttggcaagctcaaaattacattttgcaccaaaacacaggcatgat
gtggtaatgaaagactgcatcttaagctatctggaatactgctctgtgaagcaggatatc
agtaacaagataacagatctggatagtataacctctcagctggtgtttcagcaccaaact
ccagacaactatgtcatctacaaagaaacaacaggggagaaagcttgtttaatgatatat
gactggaaagtttctgttgacactatgacagaaaacaagacatctgaaaattattacaca
ggtatatggaaaacattcaaagatatcaaaattgatggagaaccatttttatctaaattc
cccatatttgtcaccatagtggtacttcaacctatgaatttcatgcccattgtagcaaca
acttgcagagttttagaagagatgagaaattctccttacaggacattcgttgacaggaga
aatgctgcattgagaactaaactgatctcttccagagatctgagagatttagggggtcat
gatggttctaagcttgttggattttattcagaatgccaagcatttaaaaatcttttgatg
tctaacataggagattacatgaatagaacagatgaagtgtttttcagtaactggtcattt
gaatacaaggatactactctaaaagacaatttaatgagccaagatgttgtagagatcata
aaatctttacctaatgatactataaagaatgatttgatgattcattttatcttcggcaat
tatgtcttttactacaagactatgagtgatctgcatagaaaggataaatttgagggatac
aaatccaactgcaagttactcaaagtcaaaccaaagaaaacagaggaagaacttaaagtg
tatttagaagacaatgaagtattattcgaaagtctatactcaaaacacatggataagata
aagacagacatgataatgaagaaaagccaggaaaaagagattaaatcgatagaagagtcc
ttcaatataaatgcagaaaattatcaagctgaatatccaggctgttttacaaatgatctt
caacaaaccaaaaccaatttttctgtttgctggtctccttctactgagaaactacatgtc
ggagaaatgaattttaataacagcattattgaaaacttcagaaaatgctttgatgatgaa
gagactctcatacataacaaaagctatggagggaagaatggtcaaggagagttttctaac
acattgtttaggctagtgaaagcatgcataaaaagcttgagctgtgacaccacaggacag
agcaaaattagagctgaagatgttgttgatataaaagatggtagtatcaaaatatcaaga
gaaagtaaagaaaaaagttggaaagaaattggaaacattaagaccagaaatgggaatgag
tttacaattggtgaaaaagccaataaagaagtcaaatcagacttcttcaaaggtttgacc
ataatgaacattgatatggggaagagaaagaaaaatgatcataagttaaagcttatggag
aagttgaaagagtccagagtggctaatgaagaatcacagatgaaagaaggtgaatacgat
gtttcatctaacatggaagttataaacatgcctttgggctcaatctcgcacaataaaaaa
ctcataagacatgataatccagacgtgaaatattggtgtaattcaatgatacaaagcatg
tatgcattacacgggtttgatacaagaggcaaagagtcagggaaaattaattcggtttat
tcagaatattgtaatgatcctgggaaggttttttctaaagggaagttaattgagactgaa
atgaacatttcaagaaacctccacaaagtttctcaatctctggcagtgtattcatacagt
gaagatatgatgcagatagcaaagggtttgatggtggcagacagattcatgagaaaaaca
gatttcaaaatcctgacatgtgccaacaccagcatgatttgcttagcatttaaaggagat
ggcttaaacacagggaaatctggagtcccatacataacgttgcacaaaatttcagaacta
ctccaaccatattttgtttcattatatacaaaagagttagtggtgtcttttaaatctggc
gaccattatgtcaatattatgagaccacagcgactaaaccaggttagattgcttagcctt
tttaaagcccctagcaaagtacctatctgtttttcacagtactgtcttcttagcacagaa
gttaagagatggatttctaaaaaaaccatagatttgttagaatgtccatccaatctgctt
ccctttttgaaaaacatattgttttcgtctgttgtgataggtacggtaacaaagttaagc
agaatgggaatttttgattttatgaggcatgcagggtttctcccgctgtctgactactca
aatataaaagagtatatagcagaaaagtttgatccagatataactaacgttgtggattgc
tattttgtctcaggcataaaaaaccttcttttgaaaatggaaggtataaacttgagtaac
agcataaaaccgctgaccatagaccaggaaaatgacatgtctggaggtataaatgatcta
aatattatctgccctataacaggatcaaccctaagaaccatcgagtgtttgtacaataat
gtgtatttggctatatacatgatgccaaaatctctccacactcacatacacaatttaaca
tcattgctgaacgtccctgcagaatgggaagttaaattccgaaccaaaatgggctttggg
ctagatgaggagattgtgccaaagaaggagatgttcaatgattctggtcccttttcaatt
gatggatccctaaacgtgaaaactctttttgattattatctaaaaactgtagacaatgtg
agctcaacacggtctaacatcgaatctaaagaagatttcctctctaccccatataaaatc
aaaactttgacatcttctaaaaagtgttctaaagctgaaataataaaaaactctgaaata
aagcaatgcttatctaactgtttaggcagagatccagaaaaaattaatgggaaagatgaa
cacatcctgaagggagtcttaaaatgctttgtagaagacaaagatgctctcagaaacttc
atgacactagaagatttggatgaatctgaatatttccattatttcactatgctcacatcc
ggagaaaataaaacattgataaaaactagttatgacaagttttacagtaacagccaccct
acaacagtggaaacatttattaaagttagatatggtcacatgtctacaactacagtgctc
aaatcaaaaaaggtaagtgaagaactttatgacttgataaaagaatacaataagatcact
aatctagatctagatgcattagaaaatttgggtagaggtttgtcaggcagtaaaatgact
tttatgcaattgctggaatttgtccttcttaagaccaggacaaatgccgggaacacagac
tttttagtctctgtttttgaaaaaatgcagagaaccaagatggatagggaaatctatcta
atgagcatgaaaaccaaaatgatgttatatttcatagaacatacatacaaacatgtagcg
caatctgatccttctgaggccatatctatatctggtgattataaaataaaaacacttgct
tcgttgtcttatgacacgataaccaactataacacagctttgcaaaagggcttagaatgc
aagatggcttttctttctgctgaccagtctaaatggtctgcctctgatttaacatacaaa
tatattctggcagtcttaatgaatccagtgctcacaacaggagagatcaacatgatgtgt
gaatgcatactaatgtatgttaaattaaaaagagtctgcatacccacagatgtcttcctc
aacctaaaaagagggcaagccacatatggctcctatggaactgctatttcgtctttaaca
aacaatttagaaacaaatactttccctgtgtctatgaactggctccaaggaaacttaaat
tatctatcttcagtctaccattcatgtgctatgctgggttatgaaaaagcattgaaaact
aatcaagattttgagttcacagtgagatggatggttcattcagatgacaatgcaacttct
gttgtagttaaaggagatatggaaaggtttttatcgaagtttaactgctctaacttatct
gaattcctgtttagaagcatccagtctcattttaagagctactgtataactttaaatcct
aaaaagagctatgcatctgaatctgaagtggagttcatatctgagagaataataaatggt
gctgttatacctctgtactgcaggaatttagctaattgttgcactgagtcatcgcacaat
agctattttgacgatttgatgtcattatctatacacattactatgttgttgagaaagggt
tgtccgaatgaacttataacatttgcatattcagccatacaatgccaagcacttagtatc
tattcaatgcttcctggagaagagaatgatatcgtttcaatagggaaagaggtgggattc
cctttgacaaaggaagaaatacctacatgtgctggagggtggatgagagcaccagtggaa
atgttatctattttaggtccttcttccaatgatcaatatatttattacaaaatattacta
gagtttttcaaacagaaagatttttcatcactcaaagctcaagtgaatagcttgggttat
gtgccattgagaatcaatgagctgaacaagagaatagcaagagatgcactcaccaaagaa
gatgtcaagatgatttgcatggtaaacctatttaagactagcttaatgtctgaagacagt
gatagtttaagcatagggatgaagttccaaacaatgatgactcagataataaagctacct
agttatgtcagtgagagttcattgatgaagaattctagcttccaagatttttgcaaacta
ttccccaatctaaagaagaattcggatttactaaagtccttaaaaaagaaccagattgac
gaagatggcattgacgatttggctgaagacgattcaatgctttcaagaatccagatggaa
gaattgtataaacatatgtcaaaacaccctgaagcccttttgattgctcctatgaatgac
aaagattatatactcactaacctttacatgtatagtagcataagcaaaaggaaccagatg
tctaatcagtctacagaaaagttggcattggatagaatactaagatctaaagcaaaaact
tttgttgatcctaactctaaacagatgatgacctacaaagagaacatgctatcaaaattg
aaagaaattatggacaagtctgccaatgattacaaaattatttctaccatatctgatatg
atggtaaaggacatgaattttgagatgataatatctttgatggaaaattcagttgcaaat
gcatcaattcctaaagcaaattacaacttcagatggttcgtcacagaaaaagtgcctagt
ataatagagggatcgcctggattgattgtaatgtccgcaatatatggaatggaatatcta
gtggaactgggattgaaaagattacctttaacagaaaactcgatctgtattttacacgat
gtgttcggtaatagaaaaacgtttgatgatgtaaagaactatttgacatctaagaattca
gagatgaaaacagaagaattcattctagctgatgatttaaaaagaggggttttgtcttta
aattatatgatacaatctcaaaacaagctgctgtctctgaacacttgtttctccagaaag
aatttcccattttattcaaaatacaacctcgggaaaacttttatcacaaatactctagca
ttgtggagcacaatatacagtagaactacaaatataaacttctatacaaatttaaatttt
gttattgacaggaattcaagaatgatagtatctttgcaaagagacatgagtttagaaaaa
ttgcttgactgctgtgcatatgtttctgacagagtacaaagtttgttccctgacatggag
attgaagacatcagaaatatcttatccaaactcaatttcaattctattaatttgcttcag
aaagccacatcagagcttaaatctgttaaaagagctatatctcaaataaaaactgcaagc
catgtgactctgtcttacagaccacagcttatggctatgagcaagtatgcagcatggttg
tacaactttggttatatcaatgaaagagaatttaaatttgtgattgaacaagttagacaa
agtgaagtaaactacattaaaactgacgaacaggatacccgagggttctatgtctctggt
atctcatacaaaatagggatcaagactttacacaattatgctcagttggaaatgacaaac
agagatatagcaattcatttgaattcaccatatgaatttatcagagaagaagataataga
atgtgggacacacatgtaaaatctgtttacaagcttttacagaagcttctgatcgataaa
cagagtgttttaaagacttttttgaacatgaaagttgatgtgatgccgaatgagttttgc
atacacgaaagctctcaaaagaatttgttgatatatataaatgagactaatagagtagtc
acattagacaaggttaaattcaaaggaaaggtaaaatacaatttttccaacaatttcaca
tggtctctcatggagaacaattataattacatgctaagaaaagcagaaactggagagtgt
ttttcagagttgtataaaacaatagatagtggaagcaacttgatagaaaatatattgaag
aatcttaagtctagcctaattttcaattcagaaatggagaacatgctctcgaaagccgtt
gaaggaatagaagatgaggaaaacaaagatatttttgtagattctctcaaacaaatttac
gatatagcttacaaagggctgaaagagtgcaaatcttcagaagaatttgagacatatctg
aaagaaaatgaatttgagaatttagtagaaatgcagaaagaaatgctggaagtgatctgc
caagacctttctgacacagattccaggatccaatcagtggtagacaaactgagagtgtgg
tcgaacaatctgtcaaattttggagatctatgtgtgatgctgaaattttctatggtaaat
gattcaaaagggattagaacttacaaagcaaatggcattgatttccattctctttctgct
agcgagtctataatatgttctgactatgatgtatttgaaatgttaaaacttataaaagct
tgtgaagcctgtcacaccagcaattctaccttgaacttaatagcttttagagatatcaaa
aacaataaatatgttaatccatacagaaggaggtttggagggagtgtgtacttttattac
ccattgaagctcaataatgatgtcatgtcaaaattttatgaacacaagacaatttcattg
agtgatgtagagataacagaatctgtaagagatattctgaaacagaacggcttcacagta
actggctcgaatgttaaattggaatcagacatgttagagcttaaccctgttttggtcaca
gatgagcatagcacctttgatactgtctcaaggcaaatgagattgacaaaaaagaaaagt
tcatatctagtgccagccaacactctcctacttggggagttgatgaaattcctaatgcta
tgtataaaagggaatgaatacgatgtccaaaaaatgctcagtgcccattttgatttcaca
atagaaagggatgatagaatggacagtttaataaaatctataatgacactgcgtgctagt
gggtatgttcaaagatacttcactaataccaaagaagaggaaatactcttaggagcagct
gcaagcttagaaaacttcatgatattatcaacaccatgtggagagttttcagaacccttt
gatgtgcaaaaactaataaagaactctttgtccgagaaaaacaaagacaagaagttgaaa
atacttcttaggataaggtcatacatatcatctaaattagattatctaaatgatcagtgt
atatacaaaaacacaacaagtctagagataagtgatttaatatttagttctataaatcat
atagatagagaaatttcagaactaaggtcttttgacaaaactgtttatcatgatgaattc
aatgaatatctcaaggatactgaagaagcaaattctgattag
DBGET
integrated database retrieval system
