KEGG   Viruses: 65102611
Entry
65102611          CDS       T40000                                 
Symbol
KM698_gp1
Name
(RefSeq) Potexvirus nesignambrosiae; putative RNA-dependent RNA polymerase
  KO
K26615  Alphaflexiviridae RNA-directed RNA polymerase
Virus
1417304  Potexvirus nesignambrosiae
SSDB
Motif
Pfam: Vmethyltransf Viral_helicase1 RdRP_2 2OG-FeII_Oxy_2 2OG-FeII_Oxy ResIII AAA_16 NB-ARC ATPase_2 AAA_22 AAA_14 AAA_19
Other DBs
NCBI-GeneID: 65102611
NCBI-ProteinID: YP_010087332
RS: NC_055542
UniProt: V5V1R1
LinkDB
Position
NC_055542:60..4838
AA seq 1592 aa
MSQVRATLDSLNDITVRSNIQQTYAEGIKREFKAAARISHYNMPIEAATKLESFGIITNP
YSIALHSHAAAKVCENKLLDTVGHILPKERVTFLFMKPAKRNMLRRSPHLDDYFINQHLE
PRDISRYGYESSYDVIPAIPTRVAYMSDTLHFLDVNYVANMFRNSPALDILYATMVLPVE
AKFKHPSIHPEIYSINYSHGGFQYIPGNHAGGAYHHEFKQLDWLSVGRIKWKELTDWEEQ
HCITVQMLEVLGANILYVFKRGNLLTPAVRTFQVDQYVVLPRVFHPQEMNSSRPIKHTLA
MQLLLYIKTIGTPTSKDVYGKIRQLVKTSELNYLDPTELIHLTNYYYFISKLNSITCYED
ILSKNILSGVLLPAKQWLISTWEKVKGKQPFNQLLQALQWETFTYSLKVEDVETTLQAPD
GNYAKRERMPLFNDGGFKTFEVLSEDESDTSSSSGESIVVEEAPEGTPVDSTPTRAGVLK
CGCGMDFEVYDESITRLDLLNRIETPDQLRGRTAGFYSKSMEPYEYTGAKHESLGWPQWL
EDFVTTNSINSAMDHCLIQIYDEGAGIPFHKDDEKCYPKDNPILTVNLTGTAEFKIRPAK
RWNRTCTHLEHKLGPDSALVMPAGAQKSHQHSVVRCSAGRTSLTFRSTSPIETVWENKLP
DQVEVDVPIYTSEAGDPPTDITNAGPAQNKPDEVAQQPPVPPQPEHQISSDDKTDRSRRG
DHRDSNQGAKGKEPINEPSDAGPSHTKQEHEQSDDQDQVDDLRWKHWLPILNRCGFKGTE
LQHDPEGNLISPIEHHHKLEKRPFPPECPKALANSLTEMNRQPVLVSLDHRRATCVSADV
KYGKFGKLLADQDRAWKEKFHYNTQQNKRTKEVVVIHGAGGSGKSKVIQDFLKTVSVEES
YKYTIILPTNELRQDWLTKVRNLEEKSFKTFEKAMLQPCGDIVIFDDYGKMPPGYIEAFA
AQQMNGVLYILTGDSRQSVYHESNCDAAIAQLSSNVEEFEQHCRYYLNATHRNRRDLANK
LGVYSERDGTTTITHGSTILPGAPVLAPSLMKKSLLGDGGHRSMTYAGCQGLTAPKVQIL
LDNNTPLCSDKVMYTALSRAIEHVHFINSGASSSGFWDKMGTTPYLKTFLRLEREEKLRE
EEPPEAPEPAEPVVRTHLPVDDAAGIFEDLMAKQGEKYEREIYSQAHGHSNCIQTQDQFT
QIFQHQQAKDETLYWATIEKRIAISSEYENEKEFRLKADIGDVLFDNYKRAMCLPDDPIP
FSEELWNGCAREVQNTYLSKAVHLIKNGEDRQSPDMDLAHIKLFLKSQWVTKMEKAAAQV
KPGQTIAAFAQSTVMLYGTMARYMRRIRESFQPPNIMINCEKRLEDLSEFVKTRWRFDKV
ASSNDYTAFDQSQDGSMLQFEVLKAKHCGVPPEIIEGYIQIKTRAHIFLGVLNIMRLSGE
GPTFDANTECSIAYVHTKYHVPAGCNQLYAGDDSAMDDVLEEKPSFANIRAQMKLEEKLQ
VHAQVKGYFAGFCGNLITPHGLVKDPVKLLAGWKLKKSRGALGTVVDSYTLDARHAYQLG
DRVHDIFTEDEMSCHQNLIREIHKVGKGHLLL
NT seq 4779 nt   +upstreamnt  +downstreamnt
atgtctcaggtcagagccaccctagattccttaaatgacatcacagtccgttcgaatatt
caacagacttatgcagaagggattaaaagagagttcaaagcggctgctagaatcagccat
tacaatatgcccatagaagcagccaccaaactagagtccttcggcatcatcacgaacccc
tactccatagctctacattcccacgcagcggccaaggtgtgtgaaaacaagcttctggac
accgtgggccatattctgccaaaggaaagggtcaccttccttttcatgaagccggccaaa
agaaacatgttgcgcagaagtccacaccttgatgattatttcatcaaccagcaccttgaa
ccgagggatattagcaggtatggatacgaaagtagttatgatgtcattcccgcgataccc
acccgagtagcctacatgtcggataccctacatttcttagatgtaaattacgtagctaat
atgtttagaaatagtcccgcattagatatactatacgccactatggtgttgcctgtggaa
gcaaaatttaaacatccgagcatccacccagagatatacagcatcaactactcacacggt
ggattccagtacatcccgggcaaccacgcaggaggtgcctaccaccacgagttcaagcag
ttagactggttgtcagtgggtaggataaaatggaaagaactcacagactgggaggaacaa
cattgtataacagtgcagatgttagaggtgttaggcgccaacatcttgtacgtatttaaa
aggggtaacctgctcacaccagcagtgaggactttccaagtagaccaatatgtagtcctt
cctagagtgttccacccccaggagatgaactcatccaggccgattaaacacactttggcc
atgcagctgctgctctacattaagacaataggcacccccacgtccaaggatgtctatgga
aagataaggcagctcgtcaagacctcagagctcaattacttggatccaacggagctcata
cacttgacgaattactactacttcatctccaaactcaacagcatcacctgttacgaagac
atcctgtccaagaacatcctgagcggggtgcttctaccagcgaaacagtggctcatcagc
acatgggagaaggtcaagggcaagcagcctttcaaccaacttttacaagcactgcagtgg
gagactttcacctactcactgaaggttgaggatgtagaaaccaccctccaggccccagat
ggcaattacgcgaaacgggagcgcatgcccctattcaatgacggtgggtttaaaactttt
gaggtgctctccgaagatgagtccgatacatcctcgtcttcaggagaatctatagtggtt
gaggaggctcctgaagggacacccgttgactcaacccccaccagagcaggtgtcctaaaa
tgcgggtgtggaatggactttgaagtatatgatgaaagtataacccgcctcgatctactt
aataggatagagacccccgaccaacttagaggcaggacggccgggttctactcaaagtcc
atggaaccatacgaatacactggggcaaaacacgaaagcctcgggtggccacagtggctg
gaggacttcgtcacgaccaactccataaactccgccatggaccactgtctcatccagatt
tacgatgagggggcggggatccctttccataaggatgatgagaagtgttaccctaaagac
aacccaatcctcaccgtgaacctcacaggcactgccgagttcaaaataaggccggctaag
cggtggaacagaacctgtacccaccttgaacataaactaggcccagacagcgccttggtt
atgccggctggagcacaaaagagccaccaacactcagtagtcagatgctcggccggccgc
accagtctcaccttccgcagcacctcaccaatagagaccgtttgggagaacaagctacca
gatcaagtggaggtggacgtgcccatttacacctccgaagctggagacccacccactgac
ataacaaatgcagggccagcacaaaacaagcccgacgaggtagctcaacagccaccggtg
cccccgcaaccggaacatcaaatctcgtctgatgacaaaacggacaggtcacggcgaggt
gaccaccgagacagcaaccagggggccaaagggaaggaacctattaacgaaccaagcgac
gccggcccatcacacaccaaacaggaacacgaacagtccgatgaccaggaccaggttgac
gacctgaggtggaaacactggctccccatactcaaccgctgcgggtttaaggggaccgaa
ttgcaacacgacccagaaggcaatttgataagccccatagagcaccaccacaagctagaa
aaacgaccctttcccccagaatgcccaaaggcacttgcgaactctctgactgagatgaac
aggcagccggtactggtctcattagaccatagacgggccacatgcgtttcagccgacgtg
aaatatggaaaattcggaaagctgctggcagatcaggaccgtgcctggaaagagaagttt
cactacaacacacagcaaaacaaacgaacaaaggaagtagtggttatacacggcgcgggg
ggcagtgggaaaagcaaagtcatccaagacttccttaaaacggtttcggtggaagagtct
tacaaatataccatcatccttcccaccaatgagcttagacaggattggctcacaaaagtc
cgaaacttagaagagaaaagcttcaagacctttgaaaaggctatgttgcagccttgtggg
gacatagtcatattcgatgactacggaaaaatgccacctggatacattgaggcgttcgcc
gcacaacaaatgaacggtgtgctctacatattgacgggagactctaggcaatccgtctac
catgagagcaattgcgacgccgccatcgctcagctttcctcaaacgtggaggaattcgaa
cagcactgccggtactacctcaacgccacgcacagaaaccgccgggatttagcgaacaag
cttggggtgtattcagagagggatggcaccaccacaatcacacatggctctaccatcctc
ccaggggctcccgtgctcgcgccctccctgatgaagaagagtctgctaggcgacgggggg
catcgatctatgacctacgcaggctgccagggcctcacggcaccaaaggtacagatttta
ctggacaataacaccccactgtgctcggataaggtcatgtacacagcgctttcaagggcc
atagagcacgtgcacttcataaactcaggagcctcaagctccggcttctgggacaaaatg
ggcacgacaccataccttaaaaccttcctcaggctggaaagagaagagaaactgcgagag
gaagaaccccccgaggcccctgagccggcagagcccgttgttagaacacacctgccagtc
gacgacgcggctggaatctttgaggatctcatggccaagcagggtgaaaaatatgagcgg
gagatttacagccaagcccacggccattcaaactgtatccaaacgcaggaccagttcaca
caaatcttccagcaccagcaggccaaggatgagactctgtactgggccactatcgagaaa
cgcatcgccatctcgtccgagtatgaaaacgagaaagaatttcggcttaaggcagacatt
ggcgatgtgttatttgacaactacaagcgtgccatgtgtctgccggacgacccgatcccc
ttcagcgaagaattgtggaacggatgcgctagggaagttcagaacacatacctctccaaa
gctgtccacctaatcaaaaatggggaggaccggcaaagcccagacatggacctggcccat
attaaactcttcctcaagtcacagtgggtcacaaaaatggaaaaagccgctgcacaagta
aagccgggtcagacgatcgcggctttcgcccaatccacagtgatgctgtatggaaccatg
gcccgttacatgaggagaattagggagagtttccagcccccgaacattatgattaattgc
gagaagcggttggaagatcttagcgagtttgttaagactaggtggcggttcgacaaggtg
gcatcatccaatgactacacagcctttgaccagtcacaagacggctctatgctacagttt
gaggtcctcaaggccaaacactgcggagttcccccggagatcatagagggctacattcag
ataaagacccgggcacacatctttctgggggtcctgaacatcatgcggctaagcggtgag
gggcccaccttcgacgcaaacaccgagtgttctatagcctatgtacacacgaagtaccac
gtaccagccggctgcaatcagttatatgcaggagatgactcggccatggatgacgtgctg
gaagagaaacccagctttgccaacatcagggcccaaatgaaactggaggagaagttgcag
gttcatgcccaagtaaaggggtactttgccgggttctgcggcaatctgataactccacat
ggcctggttaaagatccggtcaaacttttagcaggctggaagttgaagaagagcagaggg
gcgctgggcacggtcgtcgattcctacactcttgacgcacgacacgcataccaacttggg
gatagggtgcatgacatctttaccgaggatgagatgagctgccaccagaacctgatcagg
gagattcacaaggtgggtaaaggccaccttctcctatga

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